4A3FC

Rna polymerase ii initial transcribing complex with a 6nt dna-rna hybrid and soaked with ampcpp
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription
publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
total genus 63
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3fC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3fC01
2NVQK 2B63K 4Y52K 5C4XK 5M5WK 2PA8D 2NVXK 2JA6K 2R92K 4YFNA 5IP9C 3GTJC 2NVYC 3GTGC 4A3EC 4LK0A 5M3MK 5C3EK 2CW0A 1TWCK 1I3QC 5TMCA 4C3HK 4Y7NK 2PMZL 3RZDC 3I4NK 1I6HK 3I4MK 4A3GC 4G7ZA 4KMUA 3WODA 1YNNA 4A3MC 3HOWC 5IYCC 4BXXC 3HOXK 2WAQL 3GTKK 3S14C 4QIWL 4BBSC 4QJVB 2R93C 4C2MK 3CQZC 3GTLK 1XPPA 4MQ9A 4XSXA 5IYDK 3GTMC 4YFKA 2YU9C 2WAQD 2A68A 4C3JC 2E2IC 3S2HC 4A3BC 2JA8C 4OIPA 2R7ZC 5IP9K 4QIWD 4XLPA 1HQMA 1TWFC 3GTOC 3PO2C 2NVYK 3GTJK 2A6HA 4A3EK 3S15C 2A69A 3GTGK 3EQLA 1I3QK 1BDFA 4QJVA 2JA5C 3RZDK 4A3GK 4JK1A 5M5XK 4A3MK 3HOWK 5IYCK 2NVTC 1R9TC 4A93C 4BXXK 4NOIA 4A3JC 3H3VL 1YNJA 1TWHC 1ZYRA 4G7OA 3S14K 4BBSK 2R93K 3CQZK 5FLMC 4BY7C 3S2DC 3GTMK 2YU9K 4MEXA 2PPBA 3H3VD 4C3JK 3S1NC 5D4DA 4A3CC 5M5YK 2E2IK 4OIQA 3M4OC 2JA8K 1TWFK 2R7ZK 3S16C 5IYBC 3S1MC 4OIRA 4A3DC 3GTOK 3PO2K 3HOYC 3S15K 4A3KC 2E2HC 4ZH4A 3M3YC 5TMFA 2JA5K 5C4JC 3RZOC 5FJ8K 3S1RC 2NVTK 1R9TK 4A93K 3PO3C 4A3JK 4KN4A 4MEYA 3GTPC 1Y1VC 1I50C 1TWHK 3S17C 1I6VA 4G7HA 5FLMK 1WCMC 1SMYA 3HKZD 3S2DK 4LK1A 4BY7K 1IW7A 2BE5A 3HOVC 2O5JA 3S1NK 1TWGC 4A3CK 3M4OK 5C44C 2A6EA 4C3IC 5IYBK 3S1MK 4LJZA 4A3DK 4A3FC 3HOYK 5IP7C 4A3KK 2E2HK 3M3YK 4Q5SA 4A3IC 4A3LC 2Y0SL 2VUMC 2WB1L 5C4JK 3RZOK 4BY1C 3K7AC 5IYDC 3H0GC 2JA7C 1SFOC 3HOUC 4X6AC 5M3FK 4BBRC 3S1RK 3PO3K 3GTPK 1K83C 3FKIC 4Q4ZA 1TWAC 3S1QC 1I50K 1Y1VK 2E2JC 3S17K 2Y0SD 4OIOA 2WB1D 1WCMK 3HKZL 3GTQC 1Y1WC 3HOZC 3HOVK 4LLGA 4XLNA 1TWGK 2NVQC 5C44K 4Y52C 2B63C 4C3IK 5C4XC 4YFXA 4KN7A 5IP7K 2NVXC 4A3FK 2JA6C 2R92C 4AYBL 3S2HK 4A3IK 4A3LK 4A3BK 2O5IA 2VUMK 4BY1K 4OINA 3K7AK 2JA7K 5C3EC 3H0GK 1SFOK 3HOUK 1TWCC 3S16K 4BBRK 4X6AK 4C3HC 1I6HC 4Y7NC 3I4NC 2PMZD 1K83K 3FKIK 1TWAK 4AYBD 3I4MC 3S1QK 2E2JK 3DXJA 3HOXC 4YG2A 2PA8L 3GTQK 4GZYA 3GTKC 1Y1WK 3HOZK 4XSZA 3GTLC 4C2MC
chains in the Genus database with same CATH superfamily
1YCLA 5IOSA 3S0XA 2PA8D 4LOWA 2JA6K 5IP9C 3L4KA 1USOA 2NVYC 3GTQA 2CW0A 1ZBSA 4WILA 1I6HK 4Y7NK 3I4NK 3T01A 3GTPA 4P5BA 3BP8C 3GTKK 1F9NA 4WJ3M 1WSRA 2R93C 5EGEA 1WOPA 1IS1A 4P9SA 1TWCA 3GTMC 5IOQA 4YFKA 1RU0A 2GSOA 2WAQD 2GAGC 4A3BC 2E2IC 4QIWD 2KWAA 4KMDA 3GTJK 2V6TA 2A69A 2ZJPS 3EQLA 3SZZA 2ZJRS 1BDFA 3RZDK 1K83A 2KPUA 1XXCA 4A3GK 3FOEA 4A3MK 3HOWK 5IYCK 4BXXK 1R9TC 3N3YA 3TFJA 1YNJA 1X31C 3A8IA 3S14K 2NVYA 3CQZK 3TFHA 4BLBA 3S2DC 4BLAA 1J98A 1B4AA 4XCHA 4C3JK 3H3VD 1EQRA 3S2HK 5D4DA 4A3CC 3LPXA 2R7ZK 4OIQA 5IYBC 1F7UA 3M3YC 2R93A 2JA5K 4RMFA 3G4CA 5FJ8K 3AQOA 2E2IA 4AH6A 3S17C 1B4BA 3JSTA 1WCMC 3OEPA 5DM6S 2O5JA 3S1NK 4LJZA 3FOFA 1R9TA 4A3FC 4GT9A 1XZPB 1J6XA 3GDZA 3FKIC 1Y1VK 3ERED 3HOZC 2PHCB 1O2AA 4XLNA 2B63C 4ILDA 4C3IK 4YFXA 5IP7K 2W7VA 2CFAB 1JOEA 4A3IK 4A3LK 1V5VA 2VUMK 1EH1A 1WCMA 3HOUK 5IYDK 1PJ6A 3PIPS 3S16K 2P8TA 4BBRK 4X6AK 1KQ4A 1PJ5A 1WIHA 4WF9S 3HOXC 1WORA 3GTQK 4J3NA 3CF5S 1XZQA 5HQHA 2NVQK 5C4XK 3MMLB 1IL2A 3FKIA 4YFNA 3GTGC 4A3EC 3V4GA 1TWCK 1I3QC 5TMCA 5CHPA 1JVIA 4G7ZA 4KMUA 2B63A 1YNNA 1O28A 2ZUEA 4M1XA 4LQYA 4BBSC 1DD5A 2RH6A 4GTDA 2GAHC 2KXYA 3AD9C 3VA7A 2YU9C 1XXAA 5IP9K 1VGXA 2JA8C 4OIPA 4KM8A 3SZYA 1HQMA 1TWFC 1VH2A 2NVYK 4QJVA 2P5MA 3GEEA 3OPFA 1TWHC 1ZYRA 4GTAA 3GTGA 4GTEA 2R93K 4IOAS 1USMA 3T00A 3GTMK 1I3QA 4MEXA 4A3BK 2E2IK 5M5YK 3S1MC 4OIRA 3HOYC 2E2HC 4ZH4A 5C4JC 4KC6A 3S1RC 2YU9A 4WFBS 1R9TK 3PO3C 2V6SA 4GTBA 4KN4A 4MEYA 5IORA 2D6FC 1GE9A 1I50C 1TWFA 1UV7A 3S2DK 4LK1A 4KATA 4PAAA 3LYWA 4WFNS 1IW7A 3AD8C 1IE0A 1TWGC 2EBBA 4A3CK 5IYBK 3BUEA 3M3YK 1TWHA 4BY1C 3K7AC 1ZVUA 3H0GC 5M3FK 4G0VA 5JVGS 2L5NA 4Q4ZA 3S1QC 1TWAC 3S17K 2E2JC 4OIOA 1WCMK 1O2FB 2E2HA 1Y1WC 3GTMA 2ZFZA 1DCHA 4Y52C 4GFQA 2FQTA 4A3FK 1EI6A 2NVXC 4DDQA 2R92C 1WQHA 4AYBL 1I50A 1YX2A 5C3EC 4KB4A 3NUHA 4C3HC 3FKIK 1TWGA 4FM9A 3I4MC 3DXJA 1O2BA 4U67S 4GZYA 3HOZK 3GTLC 4C2MC 3A8KA 1VJEA 3H0GA 2B63K 1FEUA 4WFAS 3T02A 1F93A 5EGHA 4G0UA 4LK0A 5M3MK 1Y1WA 4GTLA 3GSIA 3WODA 3HOXK 3QX3A 4WCES 2R92A 3DLLS 2L3UA 1XPPA 4MQ9A 4XSXA 1G51A 1INNA 2A68A 2ZJQS 4XLPA 3GTOC 3PO2C 4A3EK 3GTGK 2GSUA 3S15C 3G4AA 1I3QK 5HL8A 1DCOA 4PABA 3GTLA 1AB4A 1XXBA 1VRQC 2NVTC 4A93C 4NOIA 4A3JC 1BGWA 4BBSK 5FLMC 4BY7C 3N0BA 1WSVA 2YU9K 2V6UA 2XCOA 3BP3A 2JA8K 5CJ9A 3M4OC 1TWFK 1ISEA 3S16C 4A3DC 4A3KC 4KM9A 3FHZA 5JFEA 5TMFA 1WOSA 3RZOC 4O2DA 2XCQA 3A8JA 3GTPC 1TWHK 2Y3PA 3GTOA 1SMYA 2BE5A 3HOVC 1EK8A 5C44C 2A6EA 3S1MK 4G0WA 4GTCA 3HOYK 2E2HK 3AD7C 1PJ7A 4Q5SA 1BJTA 2Y0SL 2WB1L 5C4JK 3TTGA 2JA7C 3S1RK 1SFOC 2JH3A 3PO3K 2ZUFA 1K83C 1I50K 1O26A 3LAJA 1XZPA 1F7VA 4BKWA 2RGRA 1WQFA 1TWGK 3TFIA 5E68A 1O25A 2JA6C 5IOTA 1XZQB 3CAGA 2O5IA 4C45A 4BY1K 4OINA 3K7AK 1J6WA 3H0GK 1I6HC 4Y7NC 3I4NC 2PMZD 3S1QK 1TWAK 4AYBD 2E2JK 2PA8L 3GTKC 1Y1WK 2CFAA 2JA7A 4Y52K 1SFOA 4GTFA 5M5WK 2NVXK 2R92K 3GTJC 4KASA 1WOOA 4KDDA 1L0WA 5C3EK 4C3HK 4FZBA 2PMZL 3RZDC 3I4MK 3GIRA 4A3GC 4BXXC 4A3MC 3HOWC 5IYCC 2WAQL 2JA6A 3S14C 4KMHA 4QIWL 5TJ3A 4QJVB 4C2MK 3N0CA 3CQZC 3OREA 3GTLK 1O24A 4C3JC 3S2HC 2R7ZC 1IQ0A 3IPJA 2A6HA 1WQGA 3GTKA 4P5AA 5L46A 2JA5C 3ADAC 1O27A 1TWAA 4JK1A 5M5XK 5DM7S 3AQPA 4KARA 3H3VL 5HL7S 4G7OA 3GTJA 3HXAA 3GEHA 1J6VA 2NVXA 2PPBA 3S1NC 3L4JA 3GTOK 3PO2K 3S15K 1ZQ1C 2XCRB 3CQZA 1VLOA 2NVTK 3LAPA 4A93K 4A3JK 1Y1VC 2R7ZA 1IBAA 1ZXOA 1I6VA 4G7HA 1O29A 5FLMK 4BY7K 3HKZD 4KAWX 2GSNA 5JVHS 2JA5A 3M4OK 4C3IC 3AH5A 1EFWA 4A3DK 1C0AA 5IP7C 4A3KK 4A3IC 4A3LC 2VUMC 5JVOA 3RZOK 5IYDC 3HOUC 4X6AC 4BBRC 1HI9A 3GTPK 2Y0SD 4LR2A 2WB1D 3HKZL 4IOCS 3GTQC 3GEIA 2KQ1A 3HOVK 4LLGA 2NVQC 5C44K 5C4XC 1JQWA 4KN7A 1BS2A 1Y1VA 4WJ4A 4KMAA 2JA7K 3Q3QA 1DCPA 1SFOK 1TWCC 4KB2A 1K83K 2FQOA 4YG2A 4IO9S 4XSZA 2VUMA 3PIOS
chains in the Genus database with same CATH topology
2NVQK 2B63K 4Y52K 5C4XK 5M5WK 2PA8D 2NVXK 2JA6K 2R92K 4YFNA 5IP9C 3GTJC 2NVYC 3GTGC 4A3EC 4LK0A 5M3MK 5C3EK 2CW0A 1TWCK 1I3QC 5TMCA 4C3HK 4Y7NK 2PMZL 3RZDC 3I4NK 1I6HK 3I4MK 4A3GC 4G7ZA 4KMUA 3WODA 1YNNA 4A3MC 3HOWC 5IYCC 4BXXC 3HOXK 2WAQL 3GTKK 3S14C 4QIWL 4BBSC 4QJVB 2R93C 4C2MK 3CQZC 3GTLK 1XPPA 4MQ9A 4XSXA 5IYDK 3GTMC 4YFKA 2YU9C 2WAQD 2A68A 4C3JC 2E2IC 3S2HC 4A3BC 2JA8C 4OIPA 2R7ZC 5IP9K 4QIWD 4XLPA 1HQMA 1TWFC 3GTOC 3PO2C 2NVYK 3GTJK 2A6HA 4A3EK 3S15C 2A69A 3GTGK 3EQLA 1I3QK 1BDFA 4QJVA 2JA5C 3RZDK 4A3GK 4JK1A 5M5XK 4A3MK 3HOWK 5IYCK 2NVTC 1R9TC 4A93C 4BXXK 4NOIA 4A3JC 3H3VL 1YNJA 1TWHC 1ZYRA 4G7OA 3S14K 4BBSK 2R93K 3CQZK 5FLMC 4BY7C 3S2DC 3GTMK 2YU9K 4MEXA 2PPBA 3H3VD 4C3JK 3S1NC 5D4DA 4A3CC 5M5YK 2E2IK 4OIQA 3M4OC 2JA8K 1TWFK 2R7ZK 3S16C 5IYBC 3S1MC 4OIRA 4A3DC 3GTOK 3PO2K 3HOYC 3S15K 4A3KC 2E2HC 4ZH4A 3M3YC 5TMFA 2JA5K 5C4JC 3RZOC 5FJ8K 3S1RC 2NVTK 1R9TK 4A93K 3PO3C 4A3JK 4KN4A 4MEYA 3GTPC 1Y1VC 1I50C 1TWHK 3S17C 1I6VA 4G7HA 5FLMK 1WCMC 1SMYA 3HKZD 3S2DK 4LK1A 4BY7K 1IW7A 2BE5A 3HOVC 2O5JA 3S1NK 1TWGC 4A3CK 3M4OK 5C44C 2A6EA 4C3IC 5IYBK 3S1MK 4LJZA 4A3DK 4A3FC 3HOYK 5IP7C 4A3KK 2E2HK 3M3YK 4Q5SA 4A3IC 4A3LC 2Y0SL 2VUMC 2WB1L 5C4JK 3RZOK 4BY1C 3K7AC 5IYDC 3H0GC 2JA7C 1SFOC 3HOUC 4X6AC 5M3FK 4BBRC 3S1RK 3PO3K 3GTPK 1K83C 3FKIC 4Q4ZA 1TWAC 3S1QC 1I50K 1Y1VK 2E2JC 3S17K 2Y0SD 4OIOA 2WB1D 1WCMK 3HKZL 3GTQC 1Y1WC 3HOZC 3HOVK 4LLGA 4XLNA 1TWGK 2NVQC 5C44K 4Y52C 2B63C 4C3IK 5C4XC 4YFXA 4KN7A 5IP7K 2NVXC 4A3FK 2JA6C 2R92C 4AYBL 3S2HK 4A3IK 4A3LK 4A3BK 2O5IA 2VUMK 4BY1K 4OINA 3K7AK 2JA7K 5C3EC 3H0GK 1SFOK 3HOUK 1TWCC 3S16K 4BBRK 4X6AK 4C3HC 1I6HC 4Y7NC 3I4NC 2PMZD 1K83K 3FKIK 1TWAK 4AYBD 3I4MC 3S1QK 2E2JK 3DXJA 3HOXC 4YG2A 2PA8L 3GTQK 4GZYA 3GTKC 1Y1WK 3HOZK 4XSZA 3GTLC 4C2MC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2NVQ K;  2B63 K;  4Y52 K;  5C4X K;  5M5W K;  2PA8 D;  2NVX K;  2JA6 K;  2R92 K;  4YFN A;  5IP9 C;  3GTJ C;  2NVY C;  3GTG C;  4A3E C;  4LK0 A;  5M3M K;  5C3E K;  2CW0 A;  1TWC K;  1I3Q C;  5TMC A;  4C3H K;  4Y7N K;  2PMZ L;  3RZD C;  3I4N K;  1I6H K;  3I4M K;  4A3G C;  4G7Z A;  4KMU A;  3WOD A;  1YNN A;  4A3M C;  3HOW C;  5IYC C;  4BXX C;  3HOX K;  2WAQ L;  3GTK K;  3S14 C;  4QIW L;  4BBS C;  4QJV B;  2R93 C;  4C2M K;  3CQZ C;  3GTL K;  1XPP A;  4MQ9 A;  4XSX A;  5IYD K;  3GTM C;  4YFK A;  2YU9 C;  2WAQ D;  2A68 A;  4C3J C;  2E2I C;  3S2H C;  4A3B C;  2JA8 C;  4OIP A;  2R7Z C;  5IP9 K;  4QIW D;  4XLP A;  1HQM A;  1TWF C;  3GTO C;  3PO2 C;  2NVY K;  3GTJ K;  2A6H A;  4A3E K;  3S15 C;  2A69 A;  3GTG K;  3EQL A;  1I3Q K;  1BDF A;  4QJV A;  2JA5 C;  3RZD K;  4A3G K;  4JK1 A;  5M5X K;  4A3M K;  3HOW K;  5IYC K;  2NVT C;  1R9T C;  4A93 C;  4BXX K;  4NOI A;  4A3J C;  3H3V L;  1YNJ A;  1TWH C;  1ZYR A;  4G7O A;  3S14 K;  4BBS K;  2R93 K;  3CQZ K;  5FLM C;  4BY7 C;  3S2D C;  3GTM K;  2YU9 K;  4MEX A;  2PPB A;  3H3V D;  4C3J K;  3S1N C;  5D4D A;  4A3C C;  5M5Y K;  2E2I K;  4OIQ A;  3M4O C;  2JA8 K;  1TWF K;  2R7Z K;  3S16 C;  5IYB C;  3S1M C;  4OIR A;  4A3D C;  3GTO K;  3PO2 K;  3HOY C;  3S15 K;  4A3K C;  2E2H C;  4ZH4 A;  3M3Y C;  5TMF A;  2JA5 K;  5C4J C;  3RZO C;  5FJ8 K;  3S1R C;  2NVT K;  1R9T K;  4A93 K;  3PO3 C;  4A3J K;  4KN4 A;  4MEY A;  3GTP C;  1Y1V C;  1I50 C;  1TWH K;  3S17 C;  1I6V A;  4G7H A;  5FLM K;  1WCM C;  1SMY A;  3HKZ D;  3S2D K;  4LK1 A;  4BY7 K;  1IW7 A;  2BE5 A;  3HOV C;  2O5J A;  3S1N K;  1TWG C;  4A3C K;  3M4O K;  5C44 C;  2A6E A;  4C3I C;  5IYB K;  3S1M K;  4LJZ A;  4A3D K;  4A3F C;  3HOY K;  5IP7 C;  4A3K K;  2E2H K;  3M3Y K;  4Q5S A;  4A3I C;  4A3L C;  2Y0S L;  2VUM C;  2WB1 L;  5C4J K;  3RZO K;  4BY1 C;  3K7A C;  5IYD C;  3H0G C;  2JA7 C;  1SFO C;  3HOU C;  4X6A C;  5M3F K;  4BBR C;  3S1R K;  3PO3 K;  3GTP K;  1K83 C;  3FKI C;  4Q4Z A;  1TWA C;  3S1Q C;  1I50 K;  1Y1V K;  2E2J C;  3S17 K;  2Y0S D;  4OIO A;  2WB1 D;  1WCM K;  3HKZ L;  3GTQ C;  1Y1W C;  3HOZ C;  3HOV K;  4LLG A;  4XLN A;  1TWG K;  2NVQ C;  5C44 K;  4Y52 C;  2B63 C;  4C3I K;  5C4X C;  4YFX A;  4KN7 A;  5IP7 K;  2NVX C;  4A3F K;  2JA6 C;  2R92 C;  4AYB L;  3S2H K;  4A3I K;  4A3L K;  4A3B K;  2O5I A;  2VUM K;  4BY1 K;  4OIN A;  3K7A K;  2JA7 K;  5C3E C;  3H0G K;  1SFO K;  3HOU K;  1TWC C;  3S16 K;  4BBR K;  4X6A K;  4C3H C;  1I6H C;  4Y7N C;  3I4N C;  2PMZ D;  1K83 K;  3FKI K;  1TWA K;  4AYB D;  3I4M C;  3S1Q K;  2E2J K;  3DXJ A;  3HOX C;  4YG2 A;  2PA8 L;  3GTQ K;  4GZY A;  3GTK C;  1Y1W K;  3HOZ K;  4XSZ A;  3GTL C;  4C2M C; 
#chains in the Genus database with same CATH topology
 1YCL A;  5IOS A;  3S0X A;  2PA8 D;  4LOW A;  2JA6 K;  5IP9 C;  3L4K A;  1USO A;  2NVY C;  3GTQ A;  2CW0 A;  1ZBS A;  4WIL A;  1I6H K;  4Y7N K;  3I4N K;  3T01 A;  3GTP A;  4P5B A;  3BP8 C;  3GTK K;  1F9N A;  4WJ3 M;  1WSR A;  2R93 C;  5EGE A;  1WOP A;  1IS1 A;  4P9S A;  1TWC A;  3GTM C;  5IOQ A;  4YFK A;  1RU0 A;  2GSO A;  2WAQ D;  2GAG C;  4A3B C;  2E2I C;  4QIW D;  2KWA A;  4KMD A;  3GTJ K;  2V6T A;  2A69 A;  2ZJP S;  3EQL A;  3SZZ A;  2ZJR S;  1BDF A;  3RZD K;  1K83 A;  2KPU A;  1XXC A;  4A3G K;  3FOE A;  4A3M K;  3HOW K;  5IYC K;  4BXX K;  1R9T C;  3N3Y A;  3TFJ A;  1YNJ A;  1X31 C;  3A8I A;  3S14 K;  2NVY A;  3CQZ K;  3TFH A;  4BLB A;  3S2D C;  4BLA A;  1J98 A;  1B4A A;  4XCH A;  4C3J K;  3H3V D;  1EQR A;  3S2H K;  5D4D A;  4A3C C;  3LPX A;  2R7Z K;  4OIQ A;  5IYB C;  1F7U A;  3M3Y C;  2R93 A;  2JA5 K;  4RMF A;  3G4C A;  5FJ8 K;  3AQO A;  2E2I A;  4AH6 A;  3S17 C;  1B4B A;  3JST A;  1WCM C;  3OEP A;  5DM6 S;  2O5J A;  3S1N K;  4LJZ A;  3FOF A;  1R9T A;  4A3F C;  4GT9 A;  1XZP B;  1J6X A;  3GDZ A;  3FKI C;  1Y1V K;  3ERE D;  3HOZ C;  2PHC B;  1O2A A;  4XLN A;  2B63 C;  4ILD A;  4C3I K;  4YFX A;  5IP7 K;  2W7V A;  2CFA B;  1JOE A;  4A3I K;  4A3L K;  1V5V A;  2VUM K;  1EH1 A;  1WCM A;  3HOU K;  5IYD K;  1PJ6 A;  3PIP S;  3S16 K;  2P8T A;  4BBR K;  4X6A K;  1KQ4 A;  1PJ5 A;  1WIH A;  4WF9 S;  3HOX C;  1WOR A;  3GTQ K;  4J3N A;  3CF5 S;  1XZQ A;  5HQH A;  2NVQ K;  5C4X K;  3MML B;  1IL2 A;  3FKI A;  4YFN A;  3GTG C;  4A3E C;  3V4G A;  1TWC K;  1I3Q C;  5TMC A;  5CHP A;  1JVI A;  4G7Z A;  4KMU A;  2B63 A;  1YNN A;  1O28 A;  2ZUE A;  4M1X A;  4LQY A;  4BBS C;  1DD5 A;  2RH6 A;  4GTD A;  2GAH C;  2KXY A;  3AD9 C;  3VA7 A;  2YU9 C;  1XXA A;  5IP9 K;  1VGX A;  2JA8 C;  4OIP A;  4KM8 A;  3SZY A;  1HQM A;  1TWF C;  1VH2 A;  2NVY K;  4QJV A;  2P5M A;  3GEE A;  3OPF A;  1TWH C;  1ZYR A;  4GTA A;  3GTG A;  4GTE A;  2R93 K;  4IOA S;  1USM A;  3T00 A;  3GTM K;  1I3Q A;  4MEX A;  4A3B K;  2E2I K;  5M5Y K;  3S1M C;  4OIR A;  3HOY C;  2E2H C;  4ZH4 A;  5C4J C;  4KC6 A;  3S1R C;  2YU9 A;  4WFB S;  1R9T K;  3PO3 C;  2V6S A;  4GTB A;  4KN4 A;  4MEY A;  5IOR A;  2D6F C;  1GE9 A;  1I50 C;  1TWF A;  1UV7 A;  3S2D K;  4LK1 A;  4KAT A;  4PAA A;  3LYW A;  4WFN S;  1IW7 A;  3AD8 C;  1IE0 A;  1TWG C;  2EBB A;  4A3C K;  5IYB K;  3BUE A;  3M3Y K;  1TWH A;  4BY1 C;  3K7A C;  1ZVU A;  3H0G C;  5M3F K;  4G0V A;  5JVG S;  2L5N A;  4Q4Z A;  3S1Q C;  1TWA C;  3S17 K;  2E2J C;  4OIO A;  1WCM K;  1O2F B;  2E2H A;  1Y1W C;  3GTM A;  2ZFZ A;  1DCH A;  4Y52 C;  4GFQ A;  2FQT A;  4A3F K;  1EI6 A;  2NVX C;  4DDQ A;  2R92 C;  1WQH A;  4AYB L;  1I50 A;  1YX2 A;  5C3E C;  4KB4 A;  3NUH A;  4C3H C;  3FKI K;  1TWG A;  4FM9 A;  3I4M C;  3DXJ A;  1O2B A;  4U67 S;  4GZY A;  3HOZ K;  3GTL C;  4C2M C;  3A8K A;  1VJE A;  3H0G A;  2B63 K;  1FEU A;  4WFA S;  3T02 A;  1F93 A;  5EGH A;  4G0U A;  4LK0 A;  5M3M K;  1Y1W A;  4GTL A;  3GSI A;  3WOD A;  3HOX K;  3QX3 A;  4WCE S;  2R92 A;  3DLL S;  2L3U A;  1XPP A;  4MQ9 A;  4XSX A;  1G51 A;  1INN A;  2A68 A;  2ZJQ S;  4XLP A;  3GTO C;  3PO2 C;  4A3E K;  3GTG K;  2GSU A;  3S15 C;  3G4A A;  1I3Q K;  5HL8 A;  1DCO A;  4PAB A;  3GTL A;  1AB4 A;  1XXB A;  1VRQ C;  2NVT C;  4A93 C;  4NOI A;  4A3J C;  1BGW A;  4BBS K;  5FLM C;  4BY7 C;  3N0B A;  1WSV A;  2YU9 K;  2V6U A;  2XCO A;  3BP3 A;  2JA8 K;  5CJ9 A;  3M4O C;  1TWF K;  1ISE A;  3S16 C;  4A3D C;  4A3K C;  4KM9 A;  3FHZ A;  5JFE A;  5TMF A;  1WOS A;  3RZO C;  4O2D A;  2XCQ A;  3A8J A;  3GTP C;  1TWH K;  2Y3P A;  3GTO A;  1SMY A;  2BE5 A;  3HOV C;  1EK8 A;  5C44 C;  2A6E A;  3S1M K;  4G0W A;  4GTC A;  3HOY K;  2E2H K;  3AD7 C;  1PJ7 A;  4Q5S A;  1BJT A;  2Y0S L;  2WB1 L;  5C4J K;  3TTG A;  2JA7 C;  3S1R K;  1SFO C;  2JH3 A;  3PO3 K;  2ZUF A;  1K83 C;  1I50 K;  1O26 A;  3LAJ A;  1XZP A;  1F7V A;  4BKW A;  2RGR A;  1WQF A;  1TWG K;  3TFI A;  5E68 A;  1O25 A;  2JA6 C;  5IOT A;  1XZQ B;  3CAG A;  2O5I A;  4C45 A;  4BY1 K;  4OIN A;  3K7A K;  1J6W A;  3H0G K;  1I6H C;  4Y7N C;  3I4N C;  2PMZ D;  3S1Q K;  1TWA K;  4AYB D;  2E2J K;  2PA8 L;  3GTK C;  1Y1W K;  2CFA A;  2JA7 A;  4Y52 K;  1SFO A;  4GTF A;  5M5W K;  2NVX K;  2R92 K;  3GTJ C;  4KAS A;  1WOO A;  4KDD A;  1L0W A;  5C3E K;  4C3H K;  4FZB A;  2PMZ L;  3RZD C;  3I4M K;  3GIR A;  4A3G C;  4BXX C;  4A3M C;  3HOW C;  5IYC C;  2WAQ L;  2JA6 A;  3S14 C;  4KMH A;  4QIW L;  5TJ3 A;  4QJV B;  4C2M K;  3N0C A;  3CQZ C;  3ORE A;  3GTL K;  1O24 A;  4C3J C;  3S2H C;  2R7Z C;  1IQ0 A;  3IPJ A;  2A6H A;  1WQG A;  3GTK A;  4P5A A;  5L46 A;  2JA5 C;  3ADA C;  1O27 A;  1TWA A;  4JK1 A;  5M5X K;  5DM7 S;  3AQP A;  4KAR A;  3H3V L;  5HL7 S;  4G7O A;  3GTJ A;  3HXA A;  3GEH A;  1J6V A;  2NVX A;  2PPB A;  3S1N C;  3L4J A;  3GTO K;  3PO2 K;  3S15 K;  1ZQ1 C;  2XCR B;  3CQZ A;  1VLO A;  2NVT K;  3LAP A;  4A93 K;  4A3J K;  1Y1V C;  2R7Z A;  1IBA A;  1ZXO A;  1I6V A;  4G7H A;  1O29 A;  5FLM K;  4BY7 K;  3HKZ D;  4KAW X;  2GSN A;  5JVH S;  2JA5 A;  3M4O K;  4C3I C;  3AH5 A;  1EFW A;  4A3D K;  1C0A A;  5IP7 C;  4A3K K;  4A3I C;  4A3L C;  2VUM C;  5JVO A;  3RZO K;  5IYD C;  3HOU C;  4X6A C;  4BBR C;  1HI9 A;  3GTP K;  2Y0S D;  4LR2 A;  2WB1 D;  3HKZ L;  4IOC S;  3GTQ C;  3GEI A;  2KQ1 A;  3HOV K;  4LLG A;  2NVQ C;  5C44 K;  5C4X C;  1JQW A;  4KN7 A;  1BS2 A;  1Y1V A;  4WJ4 A;  4KMA A;  2JA7 K;  3Q3Q A;  1DCP A;  1SFO K;  1TWC C;  4KB2 A;  1K83 K;  2FQO A;  4YG2 A;  4IO9 S;  4XSZ A;  2VUM A;  3PIO S; 
#chains in the Genus database with same CATH homology
 2NVQ K;  2B63 K;  4Y52 K;  5C4X K;  5M5W K;  2PA8 D;  2NVX K;  2JA6 K;  2R92 K;  4YFN A;  5IP9 C;  3GTJ C;  2NVY C;  3GTG C;  4A3E C;  4LK0 A;  5M3M K;  5C3E K;  2CW0 A;  1TWC K;  1I3Q C;  5TMC A;  4C3H K;  4Y7N K;  2PMZ L;  3RZD C;  3I4N K;  1I6H K;  3I4M K;  4A3G C;  4G7Z A;  4KMU A;  3WOD A;  1YNN A;  4A3M C;  3HOW C;  5IYC C;  4BXX C;  3HOX K;  2WAQ L;  3GTK K;  3S14 C;  4QIW L;  4BBS C;  4QJV B;  2R93 C;  4C2M K;  3CQZ C;  3GTL K;  1XPP A;  4MQ9 A;  4XSX A;  5IYD K;  3GTM C;  4YFK A;  2YU9 C;  2WAQ D;  2A68 A;  4C3J C;  2E2I C;  3S2H C;  4A3B C;  2JA8 C;  4OIP A;  2R7Z C;  5IP9 K;  4QIW D;  4XLP A;  1HQM A;  1TWF C;  3GTO C;  3PO2 C;  2NVY K;  3GTJ K;  2A6H A;  4A3E K;  3S15 C;  2A69 A;  3GTG K;  3EQL A;  1I3Q K;  1BDF A;  4QJV A;  2JA5 C;  3RZD K;  4A3G K;  4JK1 A;  5M5X K;  4A3M K;  3HOW K;  5IYC K;  2NVT C;  1R9T C;  4A93 C;  4BXX K;  4NOI A;  4A3J C;  3H3V L;  1YNJ A;  1TWH C;  1ZYR A;  4G7O A;  3S14 K;  4BBS K;  2R93 K;  3CQZ K;  5FLM C;  4BY7 C;  3S2D C;  3GTM K;  2YU9 K;  4MEX A;  2PPB A;  3H3V D;  4C3J K;  3S1N C;  5D4D A;  4A3C C;  5M5Y K;  2E2I K;  4OIQ A;  3M4O C;  2JA8 K;  1TWF K;  2R7Z K;  3S16 C;  5IYB C;  3S1M C;  4OIR A;  4A3D C;  3GTO K;  3PO2 K;  3HOY C;  3S15 K;  4A3K C;  2E2H C;  4ZH4 A;  3M3Y C;  5TMF A;  2JA5 K;  5C4J C;  3RZO C;  5FJ8 K;  3S1R C;  2NVT K;  1R9T K;  4A93 K;  3PO3 C;  4A3J K;  4KN4 A;  4MEY A;  3GTP C;  1Y1V C;  1I50 C;  1TWH K;  3S17 C;  1I6V A;  4G7H A;  5FLM K;  1WCM C;  1SMY A;  3HKZ D;  3S2D K;  4LK1 A;  4BY7 K;  1IW7 A;  2BE5 A;  3HOV C;  2O5J A;  3S1N K;  1TWG C;  4A3C K;  3M4O K;  5C44 C;  2A6E A;  4C3I C;  5IYB K;  3S1M K;  4LJZ A;  4A3D K;  4A3F C;  3HOY K;  5IP7 C;  4A3K K;  2E2H K;  3M3Y K;  4Q5S A;  4A3I C;  4A3L C;  2Y0S L;  2VUM C;  2WB1 L;  5C4J K;  3RZO K;  4BY1 C;  3K7A C;  5IYD C;  3H0G C;  2JA7 C;  1SFO C;  3HOU C;  4X6A C;  5M3F K;  4BBR C;  3S1R K;  3PO3 K;  3GTP K;  1K83 C;  3FKI C;  4Q4Z A;  1TWA C;  3S1Q C;  1I50 K;  1Y1V K;  2E2J C;  3S17 K;  2Y0S D;  4OIO A;  2WB1 D;  1WCM K;  3HKZ L;  3GTQ C;  1Y1W C;  3HOZ C;  3HOV K;  4LLG A;  4XLN A;  1TWG K;  2NVQ C;  5C44 K;  4Y52 C;  2B63 C;  4C3I K;  5C4X C;  4YFX A;  4KN7 A;  5IP7 K;  2NVX C;  4A3F K;  2JA6 C;  2R92 C;  4AYB L;  3S2H K;  4A3I K;  4A3L K;  4A3B K;  2O5I A;  2VUM K;  4BY1 K;  4OIN A;  3K7A K;  2JA7 K;  5C3E C;  3H0G K;  1SFO K;  3HOU K;  1TWC C;  3S16 K;  4BBR K;  4X6A K;  4C3H C;  1I6H C;  4Y7N C;  3I4N C;  2PMZ D;  1K83 K;  3FKI K;  1TWA K;  4AYB D;  3I4M C;  3S1Q K;  2E2J K;  3DXJ A;  3HOX C;  4YG2 A;  2PA8 L;  3GTQ K;  4GZY A;  3GTK C;  1Y1W K;  3HOZ K;  4XSZ A;  3GTL C;  4C2M C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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