4G7ZA

Crystal structure of thermus thermophilus transcription initiation complex containing 5-bru at template-strand position +1
Total Genus 44

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
44
sequence length
226
structure length
226
Chain Sequence
SKLKAPVFTVRTQGREYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYIEDVLHEFSTIPGVKEDVVEIILNLKELVVRFLNPSLQTVTLLLKAEGPKEVKARDFLPVADVEIMNPDLHIATLEEGGRLNMEVRVDRGVGYVPAEKHGIKDRINAIPVDAVFSPVRRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHLTYFSNPQ

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTIV5 (186-189)S14 (193-201)S2 (20-28)TI6 (189-192)S13 (174-183)AH1 (32-45)S3 (49-58)TI5 (161-164)AH3 (153-156)TII4 (133-136)TVIII1 (58-61)TI2 (63-66)TII2 (68-71)AH2 (75-83)TI4 (124-127)TII3 (117-120)S4 (87-89)TIV1 (89-92)3H1 (111-113)S5 (96-104)S6 (108-110)S8 (128-131)TIV2 (104-107)TIV3 (122-125)S7 (120-122)S9 (137-148)S11 (165-166)S10 (150-151)S12 (169-170)3H2 (223-225)AH4 (207-222)S1 (10-16)TII'1 (16-19)TVIII2 (187-190)TII1 (29-32)TIV4 (159-162)TI3 (91-94)TIV6 (203-206)Updating...
connected with : NaN
molecule tags Transcription, transferase/dna
source organism Thermus thermophilus
publication title Structural basis of transcription initiation.
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase subunit alpha
total genus 44
structure length 226
sequence length 226
chains with identical sequence B, K, L
ec nomenclature ec 2.7.7.6: DNA-directed RNA polymerase.
pdb deposition date 2012-07-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
A PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
A PF03118 RNA_pol_A_CTD Bacterial RNA polymerase, alpha chain C terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4g7zA02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4g7zA01
3GTJK 2JA6K 1WCMK 5FLMC 3S1QK 2R7ZC 1Y1VC 3PO2C 1I3QK 4LLGA 3M4OC 2VUMK 1TWHC 1TWFK 4XSXA 2R92C 3S2HK 2Y0SL 3S1RK 3HOWC 4OIPA 4BBRC 3PO3C 3HKZD 4MEXA 2WAQD 1SFOC 4ZH4A 2A69A 3I4NC 3HOYK 4A3GK 5M3MK 3S17K 3S1NK 3GTQK 4Q5SA 4A3DK 5M5WK 3M3YK 4MQ9A 2NVQK 4BBSK 5IYBC 4A3FC 4A3BK 2NVTK 2PMZD 4LJZA 3K7AK 4A3IK 3S2DC 2JA7K 1K83C 5TMFA 4A3EK 2JA8K 4G7OA 4G7HA 3RZDC 2JA5K 3S14K 2E2HK 5IYDC 3FKIC 3GTGC 1TWGC 1ZYRA 3H3VD 3HOVC 4Y52K 4C3IC 3HKZL 5M5YK 5IP7C 4A3CC 3H0GK 4C2MC 2R93C 2WAQL 2NVXC 2A68A 5D4DA 5C3EK 4OIOA 3I4MC 2NVYC 4BY1C 2E2JC 3CQZK 3GTOK 4A3JK 2CW0A 4OIRA 4AYBD 3GTPC 4KN4A 3RZOC 4BY7K 3GTKC 4QJVB 5IYCC 1R9TK 3WODA 2O5IA 2WB1L 1YNJA 2PMZL 4Y7NK 2B63K 3HOWK 5C44K 4XLNA 3S15K 5C4JK 2E2IK 1IW7A 3EQLA 4X6AC 5IP9C 3S1MK 3GTMC 4A3MC 1I50K 4A3KK 3GTJC 2PA8D 2JA6C 3HOZC 4C3JK 1WCMC 3S1QC 5IYBK 3HOXK 1I3QC 4A93K 1TWAK 2VUMC 4YG2A 1TWFC 4C3HK 1Y1WK 3HOUK 3S2HC 5M5XK 3S1RC 1TWCC 4OIQA 3FKIK 4BXXK 5C4XK 3S16K 4LK0A 3HOYC 4A3GC 5FLMK 2R7ZK 3GTQC 1Y1VK 1BDFA 3PO2K 5M3FK 3I4MK 1SMYA 2NVQC 2E2JK 3M4OK 4MEYA 4A3BC 2NVTC 1TWHK 1YNNA 1I6VA 2R92K 4A3IC 2Y0SD 2JA7C 3S14C 4BBRK 4A3EC 5FJ8K 2JA5C 3PO3K 1I6HC 1SFOK 2YU9C 4A3LC 4Q4ZA 3H3VL 4GZYA 3GTLC 4Y52C 5C4XC 3I4NK 4QIWD 3H0GC 4A3MK 4LK1A 4A3FK 5C3EC 3HOZK 4NOIA 2A6EA 3CQZC 3S2DK 3GTOC 1K83K 4A3JC 4AYBL 3RZDK 4YFKA 4BY7C 2PPBA 5IYDK 3DXJA 1R9TC 2O5JA 4Y7NC 2B63C 1XPPA 3GTGK 1TWGK 3HOVK 2A6HA 1HQMA 4C3IK 5C44C 1TWCK 4QJVA 3S15C 5IP7K 4A3CK 5C4JC 5TMCA 4C2MK 2NVXK 4OINA 3S17C 2E2IC 4YFNA 3S1NC 4A3DC 2R93K 3M3YC 3S1MC 4BBSC 2NVYK 1I50C 4BY1K 4QIWL 4A3KC 2PA8L 4KN7A 4C3JC 4G7ZA 3GTPK 3RZOK 3K7AC 3GTKK 5IYCK 2WB1D 2JA8C 4XSZA 3HOXC 2E2HC 4A93C 1TWAC 4JK1A 4KMUA 4C3HC 1Y1WC 4YFXA 3HOUC 1I6HK 2BE5A 2YU9K 4XLPA 4A3LK 4X6AK 3GTLK 5IP9K 4BXXC 3GTMK 3S16C
chains in the Genus database with same CATH superfamily
3LAJA 3GTOA 3MMLB 1XXAA 1WCMK 3S1QK 4C45A 5IOQA 1USMA 4IOAS 4KB2A 2Y0SL 3HOWC 4OIPA 1UV7A 2E2IA 4WJ4A 4BKWA 4MEXA 1SFOC 4ZH4A 2ZJRS 3I4NC 3BP8C 4LQYA 3S17K 3GTQK 4WF9S 4A3IK 1K83C 5TMFA 4A3EK 2JA8K 2E2HK 3FKIC 2A68A 2XCOA 4OIOA 1XZQB 2NVYC 3GTOK 2RGRA 2W7VA 4RMFA 2FQTA 1SFOA 4KATA 3WODA 3T01A 1F7VA 4G0VA 3GSIA 5C4JK 1HI9A 2E2IK 1B4BA 1WORA 4A3KK 3HOZC 1FEUA 4C3JK 2ZUFA 4ILDA 3HOXK 1WQHA 4YG2A 1WIHA 1XXCA 4C3HK 3S2HC 4OIQA 3L4JA 5JVGS 4A3GC 5DM7S 2RH6A 1BDFA 3LPXA 2NVQC 4LR2A 2E2JK 3DLLS 3ERED 4A3BC 1I6VA 1WQGA 1VJEA 2JA7C 3S14C 3T02A 4LOWA 3GTLA 1SFOK 4A3LC 3H0GA 4GTAA 3I4NK 3LAPA 1EK8A 4QIWD 1JOEA 4A3MK 5C3EC 4GTDA 4NOIA 2Y3PA 3AD7C 3CQZC 1DCOA 3FHZA 1K83K 4A3JC 4BY7C 1R9TC 4Y7NC 3OEPA 3N0BA 2A6HA 1HQMA 5C44C 2KQ1A 3S15C 2L5NA 3S17C 4YFNA 5DM6S 2CFAA 3L4KA 1WOPA 2NVYK 1YCLA 2JA8C 4XSZA 2E2HC 1Y1WA 1XZPA 4KMUA 3GEEA 1GE9A 4M1XA 1F93A 3Q3QA 3GTLK 4WFBS 1R9TA 3PO2C 1WQFA 4KM8A 5IOTA 3M4OC 1YX2A 4GTCA 2R92A 1BGWA 2V6TA 4XSXA 3S2HK 3IPJA 4KAWX 4BBRC 2PHCB 1ZXOA 1XXBA 4G0UA 1JQWA 4A3GK 1DD5A 3M3YK 2FQOA 3N0CA 2NVQK 4A3BK 2JA7K 3S14K 3TFHA 2V6UA 3HKZL 4KDDA 5IP7C 4A3CC 4IO9S 4C2MC 5E68A 1F9NA 2NVXC 5C3EK 4KC6A 3CQZK 2E2JC 5CHPA 3S0XA 4A3JK 4OIRA 4GFQA 3RZOC 4BY7K 1R9TK 4Y7NK 1YNJA 2PMZL 2CFAB 1EQRA 5C44K 4XLNA 3S15K 3AD9C 4XCHA 3EQLA 4X6AC 1RU0A 2JA6A 3FOFA 3GTMC 4A3MC 1O2BA 2ZJPS 2GSNA 2PA8D 1ISEA 1XZPB 1I3QA 4GTFA 2VUMA 4GTEA 3SZZA 4BLAA 4P9SA 1TWFC 1L0WA 3S1RC 2NVXA 1INNA 5IOSA 3ADAC 4FM9A 3TFJA 3HOYC 1BJTA 4IOCS 3PO2K 5M3FK 3M4OK 2NVTC 1YNNA 1IE0A 2ZUEA 2JA5A 2YU9A 4BBRK 3GTMA 3GTLC 4Y52C 3LYWA 3H0GC 1TWFA 3A8KA 1USOA 4YFKA 1ZBSA 5EGEA 3N3YA 3JSTA 1XPPA 1VH2A 3GEIA 4QJVA 5IP7K 4A3CK 4C2MK 2NVXK 4WFNS 3M3YC 3S1MC 4KARA 5JVOA 2PA8L 4KN7A 3RZOK 1IBAA 3V4GA 2WB1D 4A93C 1TWAC 4JK1A 1Y1WC 1I6HK 2BE5A 2YU9K 4WCES 2XCQA 4X6AK 4BXXC 3GTMK 3S16C 2R7ZA 3BUEA 1VLOA 5FLMC 5JVHS 2V6SA 1G51A 1DCHA 4KB4A 1EH1A 4KMAA 3GIRA 1O28A 1TWHC 1TWFK 1IL2A 2R92C 3S1RK 3PO3C 3OREA 3HKZD 2A69A 2ZJQS 3HOYK 1O29A 3TTGA 5M3MK 3S1NK 4A3DK 4WFAS 4BBSK 1TWAA 4A3FC 3PIOS 4KMHA 3AQPA 3NUHA 2NVTK 1C0AA 2PMZD 4LJZA 1O24A 1WOOA 4G7OA 4G7HA 1TWGA 5IYDC 3HOVC 1JVIA 5EGHA 1EFWA 4Y52K 4C3IC 5M5YK 4KASA 3H0GK 2WAQL 3OPFA 5D4DA 1TWHA 3GTPA 4BY1C 4PABA 2CW0A 3G4CA 4KN4A 4QJVB 2WB1L 2O5IA 2KXYA 1IW7A 5IP9C 3S1MK 2XCRB 3GTJC 2JA6C 2KWAA 2GSUA 5IYBK 3SZYA 3AQOA 1I3QC 4A93K 1TWAK 2VUMC 1TWCA 3A8JA 1Y1WK 5M5XK 1B4AA 4BXXK 3CAGA 2P5MA 3S16K 4LK0A 3GTQA 5FLMK 3I4MK 1SMYA 3AH5A 3QX3A 1TWHK 2R92K 5IORA 3CF5S 3PO3K 2JA5C 1AB4A 1I6HC 2YU9C 3GTJA 4Q4ZA 1J6VA 4GZYA 4FZBA 4U67S 4KM9A 1J6XA 5JFEA 5HQHA 4A3FK 1WSRA 4WILA 2A6EA 2PPBA 5IYDK 2O5JA 2B63C 3HOVK 4C3IK 1TWCK 1IS1A 4OINA 3S1NC 4A3DC 4BBSC 4BY1K 1I50C 4WJ3M 4G7ZA 4P5AA 3FOEA 2P8TA 1KQ4A 4G0WA 4YFXA 3HOUC 1ZQ1C 1O25A 1WSVA 5IP9K 5C4XC 1O27A 3GTJK 2JA6K 2R7ZC 1Y1VC 1J6WA 1PJ7A 1VRQC 1ZVUA 2B63A 1I3QK 4LLGA 4P5BA 2VUMK 4O2DA 3AD8C 2GSOA 2GAGC 2WAQD 3GEHA 1I50A 5HL8A 1O26A 1O2AA 4Q5SA 5L46A 2ZFZA 5M5WK 4MQ9A 5IYBC 1K83A 1O2FB 3K7AK 3S2DC 3FKIA 3RZDC 3G4AA 2JA5K 1EI6A 3GTGC 1TWGC 1ZYRA 3H3VD 4BLBA 1Y1VA 2R93C 2NVYA 1F7UA 3I4MC 2GAHC 1IQ0A 3HXAA 4AYBD 3GTPC 3GDZA 3GTKC 5IYCC 1VGXA 2B63K 3HOWK 1WOSA 1X31C 4GTLA 2D6FC 1I50K 5HL7S 1WCMC 3S1QC 3GTGA 3HOUK 3VA7A 2R93A 3BP3A 1TWCC 4AH6A 3FKIK 5C4XK 4J3NA 3PIPS 3GTKA 1BS2A 2R7ZK 3GTQC 1Y1VK 1DCPA 4GTBA 4MEYA 2JA7A 2EBBA 1J98A 4PAAA 5TJ3A 4DDQA 4A3IC 2Y0SD 4KMDA 4A3EC 5FJ8K 3TFIA 3H3VL 5CJ9A 1WCMA 3A8IA 3CQZA 4LK1A 3HOZK 1PJ6A 3S2DK 3GTOC 4AYBL 3RZDK 1XZQA 3DXJA 3GTGK 1TWGK 1V5VA 2KPUA 3T00A 5C4JC 5TMCA 2R93K 2E2IC 4GT9A 4QIWL 4A3KC 4C3JC 3GTPK 2L3UA 3K7AC 3GTKK 2E2HA 5IYCK 3HOXC 4C3HC 4XLPA 4A3LK 1PJ5A 2JH3A
chains in the Genus database with same CATH topology
3GTJK 2JA6K 1WCMK 5FLMC 3S1QK 2R7ZC 1Y1VC 3PO2C 1I3QK 4LLGA 3M4OC 2VUMK 1TWHC 1TWFK 4XSXA 2R92C 3S2HK 2Y0SL 3S1RK 3HOWC 4OIPA 4BBRC 3PO3C 3HKZD 4MEXA 2WAQD 1SFOC 4ZH4A 2A69A 3I4NC 3HOYK 4A3GK 5M3MK 3S17K 3S1NK 3GTQK 4Q5SA 4A3DK 5M5WK 3M3YK 4MQ9A 2NVQK 4BBSK 5IYBC 4A3FC 4A3BK 2NVTK 2PMZD 4LJZA 3K7AK 4A3IK 3S2DC 2JA7K 1K83C 5TMFA 4A3EK 2JA8K 4G7OA 4G7HA 3RZDC 2JA5K 3S14K 2E2HK 5IYDC 3FKIC 3GTGC 1TWGC 1ZYRA 3H3VD 3HOVC 4Y52K 4C3IC 3HKZL 5M5YK 5IP7C 4A3CC 3H0GK 4C2MC 2R93C 2WAQL 2NVXC 2A68A 5D4DA 5C3EK 4OIOA 3I4MC 2NVYC 4BY1C 2E2JC 3CQZK 3GTOK 4A3JK 2CW0A 4OIRA 4AYBD 3GTPC 4KN4A 3RZOC 4BY7K 3GTKC 4QJVB 5IYCC 1R9TK 3WODA 2O5IA 2WB1L 1YNJA 2PMZL 4Y7NK 2B63K 3HOWK 5C44K 4XLNA 3S15K 5C4JK 2E2IK 1IW7A 3EQLA 4X6AC 5IP9C 3S1MK 3GTMC 4A3MC 1I50K 4A3KK 3GTJC 2PA8D 2JA6C 3HOZC 4C3JK 1WCMC 3S1QC 5IYBK 3HOXK 1I3QC 4A93K 1TWAK 2VUMC 4YG2A 1TWFC 4C3HK 1Y1WK 3HOUK 3S2HC 5M5XK 3S1RC 1TWCC 4OIQA 3FKIK 4BXXK 5C4XK 3S16K 4LK0A 3HOYC 4A3GC 5FLMK 2R7ZK 3GTQC 1Y1VK 1BDFA 3PO2K 5M3FK 3I4MK 1SMYA 2NVQC 2E2JK 3M4OK 4MEYA 4A3BC 2NVTC 1TWHK 1YNNA 1I6VA 2R92K 4A3IC 2Y0SD 2JA7C 3S14C 4BBRK 4A3EC 5FJ8K 2JA5C 3PO3K 1I6HC 1SFOK 2YU9C 4A3LC 4Q4ZA 3H3VL 4GZYA 3GTLC 4Y52C 5C4XC 3I4NK 4QIWD 3H0GC 4A3MK 4LK1A 4A3FK 5C3EC 3HOZK 4NOIA 2A6EA 3CQZC 3S2DK 3GTOC 1K83K 4A3JC 4AYBL 3RZDK 4YFKA 4BY7C 2PPBA 5IYDK 3DXJA 1R9TC 2O5JA 4Y7NC 2B63C 1XPPA 3GTGK 1TWGK 3HOVK 2A6HA 1HQMA 4C3IK 5C44C 1TWCK 4QJVA 3S15C 5IP7K 4A3CK 5C4JC 5TMCA 4C2MK 2NVXK 4OINA 3S17C 2E2IC 4YFNA 3S1NC 4A3DC 2R93K 3M3YC 3S1MC 4BBSC 2NVYK 1I50C 4BY1K 4QIWL 4A3KC 2PA8L 4KN7A 4C3JC 4G7ZA 3GTPK 3RZOK 3K7AC 3GTKK 5IYCK 2WB1D 2JA8C 4XSZA 3HOXC 2E2HC 4A93C 1TWAC 4JK1A 4KMUA 4C3HC 1Y1WC 4YFXA 3HOUC 1I6HK 2BE5A 2YU9K 4XLPA 4A3LK 4X6AK 3GTLK 5IP9K 4BXXC 3GTMK 3S16C
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3GTJ K;  2JA6 K;  1WCM K;  5FLM C;  3S1Q K;  2R7Z C;  1Y1V C;  3PO2 C;  1I3Q K;  4LLG A;  3M4O C;  2VUM K;  1TWH C;  1TWF K;  4XSX A;  2R92 C;  3S2H K;  2Y0S L;  3S1R K;  3HOW C;  4OIP A;  4BBR C;  3PO3 C;  3HKZ D;  4MEX A;  2WAQ D;  1SFO C;  4ZH4 A;  2A69 A;  3I4N C;  3HOY K;  4A3G K;  5M3M K;  3S17 K;  3S1N K;  3GTQ K;  4Q5S A;  4A3D K;  5M5W K;  3M3Y K;  4MQ9 A;  2NVQ K;  4BBS K;  5IYB C;  4A3F C;  4A3B K;  2NVT K;  2PMZ D;  4LJZ A;  3K7A K;  4A3I K;  3S2D C;  2JA7 K;  1K83 C;  5TMF A;  4A3E K;  2JA8 K;  4G7O A;  4G7H A;  3RZD C;  2JA5 K;  3S14 K;  2E2H K;  5IYD C;  3FKI C;  3GTG C;  1TWG C;  1ZYR A;  3H3V D;  3HOV C;  4Y52 K;  4C3I C;  3HKZ L;  5M5Y K;  5IP7 C;  4A3C C;  3H0G K;  4C2M C;  2R93 C;  2WAQ L;  2NVX C;  2A68 A;  5D4D A;  5C3E K;  4OIO A;  3I4M C;  2NVY C;  4BY1 C;  2E2J C;  3CQZ K;  3GTO K;  4A3J K;  2CW0 A;  4OIR A;  4AYB D;  3GTP C;  4KN4 A;  3RZO C;  4BY7 K;  3GTK C;  4QJV B;  5IYC C;  1R9T K;  3WOD A;  2O5I A;  2WB1 L;  1YNJ A;  2PMZ L;  4Y7N K;  2B63 K;  3HOW K;  5C44 K;  4XLN A;  3S15 K;  5C4J K;  2E2I K;  1IW7 A;  3EQL A;  4X6A C;  5IP9 C;  3S1M K;  3GTM C;  4A3M C;  1I50 K;  4A3K K;  3GTJ C;  2PA8 D;  2JA6 C;  3HOZ C;  4C3J K;  1WCM C;  3S1Q C;  5IYB K;  3HOX K;  1I3Q C;  4A93 K;  1TWA K;  2VUM C;  4YG2 A;  1TWF C;  4C3H K;  1Y1W K;  3HOU K;  3S2H C;  5M5X K;  3S1R C;  1TWC C;  4OIQ A;  3FKI K;  4BXX K;  5C4X K;  3S16 K;  4LK0 A;  3HOY C;  4A3G C;  5FLM K;  2R7Z K;  3GTQ C;  1Y1V K;  1BDF A;  3PO2 K;  5M3F K;  3I4M K;  1SMY A;  2NVQ C;  2E2J K;  3M4O K;  4MEY A;  4A3B C;  2NVT C;  1TWH K;  1YNN A;  1I6V A;  2R92 K;  4A3I C;  2Y0S D;  2JA7 C;  3S14 C;  4BBR K;  4A3E C;  5FJ8 K;  2JA5 C;  3PO3 K;  1I6H C;  1SFO K;  2YU9 C;  4A3L C;  4Q4Z A;  3H3V L;  4GZY A;  3GTL C;  4Y52 C;  5C4X C;  3I4N K;  4QIW D;  3H0G C;  4A3M K;  4LK1 A;  4A3F K;  5C3E C;  3HOZ K;  4NOI A;  2A6E A;  3CQZ C;  3S2D K;  3GTO C;  1K83 K;  4A3J C;  4AYB L;  3RZD K;  4YFK A;  4BY7 C;  2PPB A;  5IYD K;  3DXJ A;  1R9T C;  2O5J A;  4Y7N C;  2B63 C;  1XPP A;  3GTG K;  1TWG K;  3HOV K;  2A6H A;  1HQM A;  4C3I K;  5C44 C;  1TWC K;  4QJV A;  3S15 C;  5IP7 K;  4A3C K;  5C4J C;  5TMC A;  4C2M K;  2NVX K;  4OIN A;  3S17 C;  2E2I C;  4YFN A;  3S1N C;  4A3D C;  2R93 K;  3M3Y C;  3S1M C;  4BBS C;  2NVY K;  1I50 C;  4BY1 K;  4QIW L;  4A3K C;  2PA8 L;  4KN7 A;  4C3J C;  4G7Z A;  3GTP K;  3RZO K;  3K7A C;  3GTK K;  5IYC K;  2WB1 D;  2JA8 C;  4XSZ A;  3HOX C;  2E2H C;  4A93 C;  1TWA C;  4JK1 A;  4KMU A;  4C3H C;  1Y1W C;  4YFX A;  3HOU C;  1I6H K;  2BE5 A;  2YU9 K;  4XLP A;  4A3L K;  4X6A K;  3GTL K;  5IP9 K;  4BXX C;  3GTM K;  3S16 C; 
#chains in the Genus database with same CATH topology
 3LAJ A;  3GTO A;  3MML B;  1XXA A;  1WCM K;  3S1Q K;  4C45 A;  5IOQ A;  1USM A;  4IOA S;  4KB2 A;  2Y0S L;  3HOW C;  4OIP A;  1UV7 A;  2E2I A;  4WJ4 A;  4BKW A;  4MEX A;  1SFO C;  4ZH4 A;  2ZJR S;  3I4N C;  3BP8 C;  4LQY A;  3S17 K;  3GTQ K;  4WF9 S;  4A3I K;  1K83 C;  5TMF A;  4A3E K;  2JA8 K;  2E2H K;  3FKI C;  2A68 A;  2XCO A;  4OIO A;  1XZQ B;  2NVY C;  3GTO K;  2RGR A;  2W7V A;  4RMF A;  2FQT A;  1SFO A;  4KAT A;  3WOD A;  3T01 A;  1F7V A;  4G0V A;  3GSI A;  5C4J K;  1HI9 A;  2E2I K;  1B4B A;  1WOR A;  4A3K K;  3HOZ C;  1FEU A;  4C3J K;  2ZUF A;  4ILD A;  3HOX K;  1WQH A;  4YG2 A;  1WIH A;  1XXC A;  4C3H K;  3S2H C;  4OIQ A;  3L4J A;  5JVG S;  4A3G C;  5DM7 S;  2RH6 A;  1BDF A;  3LPX A;  2NVQ C;  4LR2 A;  2E2J K;  3DLL S;  3ERE D;  4A3B C;  1I6V A;  1WQG A;  1VJE A;  2JA7 C;  3S14 C;  3T02 A;  4LOW A;  3GTL A;  1SFO K;  4A3L C;  3H0G A;  4GTA A;  3I4N K;  3LAP A;  1EK8 A;  4QIW D;  1JOE A;  4A3M K;  5C3E C;  4GTD A;  4NOI A;  2Y3P A;  3AD7 C;  3CQZ C;  1DCO A;  3FHZ A;  1K83 K;  4A3J C;  4BY7 C;  1R9T C;  4Y7N C;  3OEP A;  3N0B A;  2A6H A;  1HQM A;  5C44 C;  2KQ1 A;  3S15 C;  2L5N A;  3S17 C;  4YFN A;  5DM6 S;  2CFA A;  3L4K A;  1WOP A;  2NVY K;  1YCL A;  2JA8 C;  4XSZ A;  2E2H C;  1Y1W A;  1XZP A;  4KMU A;  3GEE A;  1GE9 A;  4M1X A;  1F93 A;  3Q3Q A;  3GTL K;  4WFB S;  1R9T A;  3PO2 C;  1WQF A;  4KM8 A;  5IOT A;  3M4O C;  1YX2 A;  4GTC A;  2R92 A;  1BGW A;  2V6T A;  4XSX A;  3S2H K;  3IPJ A;  4KAW X;  4BBR C;  2PHC B;  1ZXO A;  1XXB A;  4G0U A;  1JQW A;  4A3G K;  1DD5 A;  3M3Y K;  2FQO A;  3N0C A;  2NVQ K;  4A3B K;  2JA7 K;  3S14 K;  3TFH A;  2V6U A;  3HKZ L;  4KDD A;  5IP7 C;  4A3C C;  4IO9 S;  4C2M C;  5E68 A;  1F9N A;  2NVX C;  5C3E K;  4KC6 A;  3CQZ K;  2E2J C;  5CHP A;  3S0X A;  4A3J K;  4OIR A;  4GFQ A;  3RZO C;  4BY7 K;  1R9T K;  4Y7N K;  1YNJ A;  2PMZ L;  2CFA B;  1EQR A;  5C44 K;  4XLN A;  3S15 K;  3AD9 C;  4XCH A;  3EQL A;  4X6A C;  1RU0 A;  2JA6 A;  3FOF A;  3GTM C;  4A3M C;  1O2B A;  2ZJP S;  2GSN A;  2PA8 D;  1ISE A;  1XZP B;  1I3Q A;  4GTF A;  2VUM A;  4GTE A;  3SZZ A;  4BLA A;  4P9S A;  1TWF C;  1L0W A;  3S1R C;  2NVX A;  1INN A;  5IOS A;  3ADA C;  4FM9 A;  3TFJ A;  3HOY C;  1BJT A;  4IOC S;  3PO2 K;  5M3F K;  3M4O K;  2NVT C;  1YNN A;  1IE0 A;  2ZUE A;  2JA5 A;  2YU9 A;  4BBR K;  3GTM A;  3GTL C;  4Y52 C;  3LYW A;  3H0G C;  1TWF A;  3A8K A;  1USO A;  4YFK A;  1ZBS A;  5EGE A;  3N3Y A;  3JST A;  1XPP A;  1VH2 A;  3GEI A;  4QJV A;  5IP7 K;  4A3C K;  4C2M K;  2NVX K;  4WFN S;  3M3Y C;  3S1M C;  4KAR A;  5JVO A;  2PA8 L;  4KN7 A;  3RZO K;  1IBA A;  3V4G A;  2WB1 D;  4A93 C;  1TWA C;  4JK1 A;  1Y1W C;  1I6H K;  2BE5 A;  2YU9 K;  4WCE S;  2XCQ A;  4X6A K;  4BXX C;  3GTM K;  3S16 C;  2R7Z A;  3BUE A;  1VLO A;  5FLM C;  5JVH S;  2V6S A;  1G51 A;  1DCH A;  4KB4 A;  1EH1 A;  4KMA A;  3GIR A;  1O28 A;  1TWH C;  1TWF K;  1IL2 A;  2R92 C;  3S1R K;  3PO3 C;  3ORE A;  3HKZ D;  2A69 A;  2ZJQ S;  3HOY K;  1O29 A;  3TTG A;  5M3M K;  3S1N K;  4A3D K;  4WFA S;  4BBS K;  1TWA A;  4A3F C;  3PIO S;  4KMH A;  3AQP A;  3NUH A;  2NVT K;  1C0A A;  2PMZ D;  4LJZ A;  1O24 A;  1WOO A;  4G7O A;  4G7H A;  1TWG A;  5IYD C;  3HOV C;  1JVI A;  5EGH A;  1EFW A;  4Y52 K;  4C3I C;  5M5Y K;  4KAS A;  3H0G K;  2WAQ L;  3OPF A;  5D4D A;  1TWH A;  3GTP A;  4BY1 C;  4PAB A;  2CW0 A;  3G4C A;  4KN4 A;  4QJV B;  2WB1 L;  2O5I A;  2KXY A;  1IW7 A;  5IP9 C;  3S1M K;  2XCR B;  3GTJ C;  2JA6 C;  2KWA A;  2GSU A;  5IYB K;  3SZY A;  3AQO A;  1I3Q C;  4A93 K;  1TWA K;  2VUM C;  1TWC A;  3A8J A;  1Y1W K;  5M5X K;  1B4A A;  4BXX K;  3CAG A;  2P5M A;  3S16 K;  4LK0 A;  3GTQ A;  5FLM K;  3I4M K;  1SMY A;  3AH5 A;  3QX3 A;  1TWH K;  2R92 K;  5IOR A;  3CF5 S;  3PO3 K;  2JA5 C;  1AB4 A;  1I6H C;  2YU9 C;  3GTJ A;  4Q4Z A;  1J6V A;  4GZY A;  4FZB A;  4U67 S;  4KM9 A;  1J6X A;  5JFE A;  5HQH A;  4A3F K;  1WSR A;  4WIL A;  2A6E A;  2PPB A;  5IYD K;  2O5J A;  2B63 C;  3HOV K;  4C3I K;  1TWC K;  1IS1 A;  4OIN A;  3S1N C;  4A3D C;  4BBS C;  4BY1 K;  1I50 C;  4WJ3 M;  4G7Z A;  4P5A A;  3FOE A;  2P8T A;  1KQ4 A;  4G0W A;  4YFX A;  3HOU C;  1ZQ1 C;  1O25 A;  1WSV A;  5IP9 K;  5C4X C;  1O27 A;  3GTJ K;  2JA6 K;  2R7Z C;  1Y1V C;  1J6W A;  1PJ7 A;  1VRQ C;  1ZVU A;  2B63 A;  1I3Q K;  4LLG A;  4P5B A;  2VUM K;  4O2D A;  3AD8 C;  2GSO A;  2GAG C;  2WAQ D;  3GEH A;  1I50 A;  5HL8 A;  1O26 A;  1O2A A;  4Q5S A;  5L46 A;  2ZFZ A;  5M5W K;  4MQ9 A;  5IYB C;  1K83 A;  1O2F B;  3K7A K;  3S2D C;  3FKI A;  3RZD C;  3G4A A;  2JA5 K;  1EI6 A;  3GTG C;  1TWG C;  1ZYR A;  3H3V D;  4BLB A;  1Y1V A;  2R93 C;  2NVY A;  1F7U A;  3I4M C;  2GAH C;  1IQ0 A;  3HXA A;  4AYB D;  3GTP C;  3GDZ A;  3GTK C;  5IYC C;  1VGX A;  2B63 K;  3HOW K;  1WOS A;  1X31 C;  4GTL A;  2D6F C;  1I50 K;  5HL7 S;  1WCM C;  3S1Q C;  3GTG A;  3HOU K;  3VA7 A;  2R93 A;  3BP3 A;  1TWC C;  4AH6 A;  3FKI K;  5C4X K;  4J3N A;  3PIP S;  3GTK A;  1BS2 A;  2R7Z K;  3GTQ C;  1Y1V K;  1DCP A;  4GTB A;  4MEY A;  2JA7 A;  2EBB A;  1J98 A;  4PAA A;  5TJ3 A;  4DDQ A;  4A3I C;  2Y0S D;  4KMD A;  4A3E C;  5FJ8 K;  3TFI A;  3H3V L;  5CJ9 A;  1WCM A;  3A8I A;  3CQZ A;  4LK1 A;  3HOZ K;  1PJ6 A;  3S2D K;  3GTO C;  4AYB L;  3RZD K;  1XZQ A;  3DXJ A;  3GTG K;  1TWG K;  1V5V A;  2KPU A;  3T00 A;  5C4J C;  5TMC A;  2R93 K;  2E2I C;  4GT9 A;  4QIW L;  4A3K C;  4C3J C;  3GTP K;  2L3U A;  3K7A C;  3GTK K;  2E2H A;  5IYC K;  3HOX C;  4C3H C;  4XLP A;  4A3L K;  1PJ5 A;  2JH3 A; 
#chains in the Genus database with same CATH homology
 3GTJ K;  2JA6 K;  1WCM K;  5FLM C;  3S1Q K;  2R7Z C;  1Y1V C;  3PO2 C;  1I3Q K;  4LLG A;  3M4O C;  2VUM K;  1TWH C;  1TWF K;  4XSX A;  2R92 C;  3S2H K;  2Y0S L;  3S1R K;  3HOW C;  4OIP A;  4BBR C;  3PO3 C;  3HKZ D;  4MEX A;  2WAQ D;  1SFO C;  4ZH4 A;  2A69 A;  3I4N C;  3HOY K;  4A3G K;  5M3M K;  3S17 K;  3S1N K;  3GTQ K;  4Q5S A;  4A3D K;  5M5W K;  3M3Y K;  4MQ9 A;  2NVQ K;  4BBS K;  5IYB C;  4A3F C;  4A3B K;  2NVT K;  2PMZ D;  4LJZ A;  3K7A K;  4A3I K;  3S2D C;  2JA7 K;  1K83 C;  5TMF A;  4A3E K;  2JA8 K;  4G7O A;  4G7H A;  3RZD C;  2JA5 K;  3S14 K;  2E2H K;  5IYD C;  3FKI C;  3GTG C;  1TWG C;  1ZYR A;  3H3V D;  3HOV C;  4Y52 K;  4C3I C;  3HKZ L;  5M5Y K;  5IP7 C;  4A3C C;  3H0G K;  4C2M C;  2R93 C;  2WAQ L;  2NVX C;  2A68 A;  5D4D A;  5C3E K;  4OIO A;  3I4M C;  2NVY C;  4BY1 C;  2E2J C;  3CQZ K;  3GTO K;  4A3J K;  2CW0 A;  4OIR A;  4AYB D;  3GTP C;  4KN4 A;  3RZO C;  4BY7 K;  3GTK C;  4QJV B;  5IYC C;  1R9T K;  3WOD A;  2O5I A;  2WB1 L;  1YNJ A;  2PMZ L;  4Y7N K;  2B63 K;  3HOW K;  5C44 K;  4XLN A;  3S15 K;  5C4J K;  2E2I K;  1IW7 A;  3EQL A;  4X6A C;  5IP9 C;  3S1M K;  3GTM C;  4A3M C;  1I50 K;  4A3K K;  3GTJ C;  2PA8 D;  2JA6 C;  3HOZ C;  4C3J K;  1WCM C;  3S1Q C;  5IYB K;  3HOX K;  1I3Q C;  4A93 K;  1TWA K;  2VUM C;  4YG2 A;  1TWF C;  4C3H K;  1Y1W K;  3HOU K;  3S2H C;  5M5X K;  3S1R C;  1TWC C;  4OIQ A;  3FKI K;  4BXX K;  5C4X K;  3S16 K;  4LK0 A;  3HOY C;  4A3G C;  5FLM K;  2R7Z K;  3GTQ C;  1Y1V K;  1BDF A;  3PO2 K;  5M3F K;  3I4M K;  1SMY A;  2NVQ C;  2E2J K;  3M4O K;  4MEY A;  4A3B C;  2NVT C;  1TWH K;  1YNN A;  1I6V A;  2R92 K;  4A3I C;  2Y0S D;  2JA7 C;  3S14 C;  4BBR K;  4A3E C;  5FJ8 K;  2JA5 C;  3PO3 K;  1I6H C;  1SFO K;  2YU9 C;  4A3L C;  4Q4Z A;  3H3V L;  4GZY A;  3GTL C;  4Y52 C;  5C4X C;  3I4N K;  4QIW D;  3H0G C;  4A3M K;  4LK1 A;  4A3F K;  5C3E C;  3HOZ K;  4NOI A;  2A6E A;  3CQZ C;  3S2D K;  3GTO C;  1K83 K;  4A3J C;  4AYB L;  3RZD K;  4YFK A;  4BY7 C;  2PPB A;  5IYD K;  3DXJ A;  1R9T C;  2O5J A;  4Y7N C;  2B63 C;  1XPP A;  3GTG K;  1TWG K;  3HOV K;  2A6H A;  1HQM A;  4C3I K;  5C44 C;  1TWC K;  4QJV A;  3S15 C;  5IP7 K;  4A3C K;  5C4J C;  5TMC A;  4C2M K;  2NVX K;  4OIN A;  3S17 C;  2E2I C;  4YFN A;  3S1N C;  4A3D C;  2R93 K;  3M3Y C;  3S1M C;  4BBS C;  2NVY K;  1I50 C;  4BY1 K;  4QIW L;  4A3K C;  2PA8 L;  4KN7 A;  4C3J C;  4G7Z A;  3GTP K;  3RZO K;  3K7A C;  3GTK K;  5IYC K;  2WB1 D;  2JA8 C;  4XSZ A;  3HOX C;  2E2H C;  4A93 C;  1TWA C;  4JK1 A;  4KMU A;  4C3H C;  1Y1W C;  4YFX A;  3HOU C;  1I6H K;  2BE5 A;  2YU9 K;  4XLP A;  4A3L K;  4X6A K;  3GTL K;  5IP9 K;  4BXX C;  3GTM K;  3S16 C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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