4OIR | Genus

Total Genus 49

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	49
sequence length	231
structure length	231
Chain Sequence	SKLKAPVFTVRTQGREYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYIEDVLHEFSTIPGVKEDVVEIILNLKELVVRFLNPSLQTVTLLLKAEGPKEVKARDFLPVADVEIMNPDLHIATLEEGGRLNMEVRVDRGVGYVPAEKHGIKDRINAIPVDAVFSPVRRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHLTYFSNPQAAAVA

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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reading 231 atoms

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231 atoms created

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Transcription, transferase/antibiotic
source organism	Thermus thermophilus
publication title	GE23077 binds to the RNA polymerase 'i' and 'i+1' sites and prevents the binding of initiating nucleotides. pubmed rcsb
molecule keywords	DNA-directed RNA polymerase subunit alpha
total genus	49
structure length	231
sequence length	231
chains with identical sequence	B
ec nomenclature	ec 2.7.7.6: DNA-directed RNA polymerase.
pdb deposition date	2014-01-20

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF01000	RNA_pol_A_bac	RNA polymerase Rpb3/RpoA insert domain
A	PF01193	RNA_pol_L	RNA polymerase Rpb3/Rpb11 dimerisation domain

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.170.120.12	Mainly Beta	Beta Complex	RNA Polymerase Alpha Subunit; Chain A, domain 2	DNA-directed RNA polymerase, insert domain	4oirA02
3.30.1360.10	Alpha Beta	2-Layer Sandwich	Gyrase A; domain 2	RNA polymerase, RBP11-like subunit	4oirA01

3K7AC 1TWFC 4A3GC 1TWGK 3DXJA 3S2HK 5M5WK 5FLMK 3S2DK 2PA8L 3S17C 2NVYK 4A3JK 3PO3K 5FJ8K 1Y1WK 2PMZL 3HKZD 3K7AK 1TWFK 4A3GK 2A6HA 4G7HA 4Y52C 1YNNA 4A93C 2R92C 2Y0SD 4A3MC 3I4NC 3S1NC 3S17K 1TWAC 5IP9C 4QIWD 4A93K 4Y52K 2R92K 4A3MK 1I50C 1YNJA 2WB1L 3I4NK 1TWAK 4AYBL 3S1NK 4C3IC 5IP9K 1SFOC 4BBSC 4QJVA 1I50K 3HOXC 4C3IK 1SFOK 4BBSK 2NVXC 3HOYC 3HOXK 3GTPC 4LJZA 3CQZC 4A3BC 1K83C 4C2MC 3GTMC 5IP7C 5D4DA 3GTQC 3M4OC 4C3JC 4A3DC 4YG2A 4G7OA 1IW7A 3RZDC 2O5JA 3S1QC 1BDFA 1R9TC 2E2JC 1SMYA 4NOIA 4A3FC 3GTPK 3CQZK 3HOYK 4A3BK 2JA8C 1K83K 4C2MK 3GTQK 5IP7K 3GTMK 3M4OK 4A3DK 2E2HC 4MEYA 4C3JK 1TWHC 3RZDK 2E2IC 1R9TK 2E2JK 3S1QK 4YFXA 2WAQL 4A3FK 5C4JC 2JA8K 5IYBC 4JK1A 3H3VD 2E2HK 4GZYA 1TWHK 2E2IK 2A69A 4LLGA 1I6VA 3EQLA 2VUMC 5IYBK 5C4JK 4MEXA 4OIQA 3GTJC 4XLPA 5M5YK 4YFNA 4BY1C 3GTOC 2PA8D 4A3KC 2VUMK 2NVQC 4X6AC 4A3IC 5TMFA 2PMZD 3HKZL 4YFKA 2CW0A 3S1MC 3GTJK 4XSXA 4BY1K 4LK1A 3GTOK 2Y0SL 4A3KK 2YU9C 2JA7C 3PO2C 2A6EA 1I3QC 2NVQK 4X6AK 4A3IK 5C4XC 2JA6C 3S1MK 2A68A 2R7ZC 5IYCC 3S1RC 3HOVC 4Q4ZA 1I6HK 5C44C 3GTGC 3RZOC 3S14C 2YU9K 2WB1D 3H0GC 4MQ9A 1ZYRA 4BY7C 4AYBD 1I3QK 5C4XK 3PO2K 4A3LK 2JA6K 2R7ZK 1WCMC 5IYCK 4QJVB 3S1RK 3HOVK 4OIOA 4KN4A 4KN7A 5C44K 3GTGK 1Y1VC 5M5XK 1XPPA 3H0GK 3RZOK 3GTLC 3S14K 4BY7K 3S16C 4Y7NC 3FKIC 1TWCC 2B63C 2PPBA 5TMCA 4XLNA 1WCMK 3I4MC 4KMUA 4LK0A 2R93C 2JA7K 1Y1VK 4OINA 3S15C 3GTLK 3S16K 2O5IA 4Y7NK 3FKIK 3HOZK 1TWCK 2B63K 3HOWC 3I4MK 2R93K 2NVXK 4BBRC 4A3EC 2JA5C 3GTKC 3PO3C 3HOUC 4A3CC 1I6HC 3S15K 5C3EC 4C3HC 4OIPA 2BE5A 2NVTC 5M3FK 3HOWK 4A3LC 4ZH4A 5IYDC 3M3YC 4BXXC 4BBRK 4A3EK 2JA5K 3WODA 1HQMA 2WAQD 4QIWL 3GTKK 4OIRA 5C3EK 4Q5SA 4C3HK 3HOUK 4A3CK 5M3MK 2NVTK 3HOZC 4XSZA 3H3VL 5IYDK 3M3YK 4BXXK 1TWGC 3S2HC 5FLMC 3S2DC 2NVYC 4A3JC 4G7ZA 1Y1WC
chains in the Genus database with same CATH superfamily

1HI9A 3FOEA 2ZUFA 1TWGK 3S2HK 3S2DK 2NVYK 2EBBA 1Y1WK 1TWFK 2ZFZA 4GTAA 5IOSA 2Y0SD 4A3MC 3S1NC 1DCOA 3N0BA 3GTQA 1YX2A 4BLBA 4AYBL 1J98A 5IP9K 1WQHA 5CJ9A 1USOA 3H0GA 2GAHC 3AD9C 1SFOK 4WJ3M 2L3UA 4BBSK 5DM6S 1UV7A 2L5NA 1VJEA 1ZVUA 4A3BC 2B63A 1K83C 3SZYA 5IP7C 4A3DC 4C3JC 4YG2A 4G7OA 1IW7A 1F93A 1R9TC 2E2JC 4KDDA 1VLOA 3DLLS 3CQZK 4FZBA 4MEYA 1TWHC 2JH3A 1USMA 3RZDK 3S1QK 2WAQL 4A3FK 2JA8K 5IYBC 4JK1A 2JA6A 4GZYA 3V4GA 4LOWA 1I6VA 3ADAC 4YFNA 1WORA 2ZUEA 2VUMK 4GTCA 2ZJQS 2PMZD 3AQOA 3HKZL 3GTJK 4LK1A 3GTOK 1JOEA 2YU9C 3AD8C 5JVHS 3S1MK 2JA5A 1O25A 2WB1D 3H0GC 1WOSA 4KMAA 3PO2K 5HQHA 2RGRA 1EK8A 5IYCK 3S1RK 4U67S 3RZOK 2PHCB 4BY7K 2B63C 1WCMK 5JVGS 2R93C 2KPUA 1XXCA 1TWCK 1XZPA 3HOWC 4A3EC 1F7UA 3CQZA 1I6HC 4C3HC 4OIPA 2NVTC 4A3LC 3GTKK 1HQMA 5M3MK 3A8IA 3H3VL 5IYDK 5L46A 2D6FC 4GTFA 1FEUA 1TWGC 3S2HC 3S2DC 2P8TA 3NUHA 2NVYC 4G7ZA 4XCHA 1Y1WC 3LAPA 2GSNA 3LYWA 2FQTA 1TWFC 3OPFA 3DXJA 4IOCS 3GTJA 3K7AK 3S17K 1WOPA 4GTDA 1K83A 4KMDA 5IP9C 5JFEA 4Y52K 1R9TA 4A93K 5IOQA 2V6TA 3I4NK 4KARA 1TWAK 3A8KA 2W7VA 4J3NA 3HXAA 4KASA 4GTLA 1SFOC 1TWHA 4BBSC 4QJVA 4KM9A 1I50K 3VA7A 4G0UA 2Y3PA 3TFIA 3TFHA 4C3IK 1C0AA 3GDZA 1J6XA 3CQZC 5D4DA 2FQOA 2O5JA 3RZDC 2NVXK 5TJ3A 3S1QC 1BDFA 3HOYK 1SMYA 4NOIA 4A3FC 1WSVA 2JA8C 1IQ0A 1IS1A 3GTMK 1JVIA 1XXBA 1GE9A 3GTKA 1O2AA 2YU9A 1VRQC 2E2HK 2E2IK 1O27A 2A69A 5C4JK 2VUMC 4OIQA 3GTJC 2CFAA 1ZXOA 3GTOC 2PA8D 3S1MC 4BY1K 2R93A 4PABA 2Y0SL 4A3KK 3PO2C 2A6EA 4X6AK 1XZQA 5IYCC 3S1RC 1B4AA 1RU0A 3RZOC 1TWAA 1I3QK 4BY7C 3LAJA 5C4XK 2R7ZK 1WCMC 4GT9A 3HOVK 5C44K 1I50A 3GTGK 3S14K 3GIRA 4GFQA 1TWCC 2PPBA 4KMUA 1TWGA 1Y1VK 3GTLK 4GTEA 2NVYA 4KMHA 2O5IA 1Y1WA 1YCLA 4Y7NK 1TWFA 1PJ5A 1O26A 3GTKC 1B4BA 3S15K 3BP3A 2ZJRS 5M3FK 3T01A 5IYDC 4QIWL 2KXYA 4OIRA 4BLAA 2E2HA 2E2IA 1BS2A 4ILDA 3M3YK 4IO9S 4GTBA 1VGXA 3K7AC 3G4CA 3L4KA 1SFOA 3IPJA 5M5WK 1DD5A 3S17C 4A3JK 5FJ8K 2PMZL 3Q3QA 1X31C 4A3GK 4G7HA 4Y52C 1YNNA 4A93C 1IE0A 4M1XA 3I4NC 1TWAC 1G51A 3N3YA 2GAGC 3MMLB 2R92K 1I50C 2WB1L 2R7ZA 4C3IC 1O28A 4LR2A 4P9SA 4G0VA 1Y1VA 2NVXC 4LQYA 3HOYC 2RH6A 3HOXK 2VUMA 2KQ1A 1XZPB 3PIOS 3GTMC 5DM7S 4DDQA 1WQGA 5JVOA 3T00A 3GTOA 3GTPK 4C2MK 3GTQK 2GSOA 3M4OK 4FM9A 2E2HC 2V6SA 2E2IC 4YFXA 5C4JC 3N0CA 3BUEA 4WFAS 4O2DA 3EQLA 4MEXA 5M5YK 4XLPA 4KAWX 1WCMA 4WF9S 4BY1C 1BGWA 4A3KC 3OREA 4X6AC 1IL2A 1TWCA 2CW0A 4XSXA 2NVQK 1I3QC 1ISEA 4A3IK 5C4XC 3G4AA 2A68A 2R7ZC 2R92A 1I6HK 3HOVC 4Q4ZA 5C44C 2XCQA 3GTGC 3S14C 2JA7K 1ZYRA 4AYBD 4A3LK 2JA6K 4QJVB 4OIOA 2XCRB 1Y1VC 1XPPA 3GTLC 4WFBS 2KWAA 4KM8A 4Y7NC 5TMCA 1V5VA 4LK0A 4OINA 1XXAA 3S15C 1O29A 3S16K 3TFJA 1F7VA 3FKIK 3I4MK 3GTPA 4KB4A 1EQRA 1AB4A 3TTGA 1VH2A 5CHPA 1WIHA 4ZH4A 3L4JA 3M3YC 4BBRK 2JA5K 4KATA 3HOUK 4A3CK 2WAQD 5C3EK 4Q5SA 4P5BA 1PJ6A 4BXXK 4A3JC 3S0XA 3HOZK 4A3GC 2CFAB 1F9NA 5FLMK 2PA8L 3PO3K 3HKZD 3CF5S 2A6HA 2NVXA 1J6WA 2R92C 1DCHA 4WFNS 4G0WA 1XZQB 3GTMA 1WOOA 3AQPA 4QIWD 1JQWA 2JA7A 3FHZA 1EFWA 4A3MK 1YNJA 3S1NK 3HOXC 4IOAS 3AD7C 1WQFA 1EI6A 4WCES 3GTPC 4LJZA 2P5MA 3FKIA 4WJ4A 4C2MC 3GTQC 3M4OC 3T02A 1INNA 3LPXA 1EH1A 4A3BK 1K83K 2GSUA 5IP7K 4PAAA 4A3DK 4C3JK 1R9TK 2E2JK 3AH5A 1IBAA 1I3QA 1BJTA 2V6UA 3H3VD 5EGEA 1KQ4A 1TWHK 1ZQ1C 4RMFA 3GTGA 4LLGA 5IYBK 1L0WA 2XCOA 3OEPA 3GEIA 3GTLA 2NVQC 4A3IC 5TMFA 2ZJPS 5EGHA 4YFKA 3ERED 3QX3A 4WILA 2JA7C 4P5AA 2JA6C 3PIPS 4AH6A 1O24A 2YU9K 1ZBSA 4MQ9A 3CAGA 5IORA 4C45A 4KN4A 4KN7A 5E68A 5IOTA 5M5XK 3H0GK 3S16C 3BP8C 3FKIC 4KC6A 4XLNA 3I4MC 3SZZA 3GEHA 1O2FB 4KB2A 3JSTA 2B63K 3A8JA 1WSRA 1DCPA 4BBRC 2JA5C 2R93K 1PJ7A 3HOUC 4A3CC 5C3EC 2BE5A 1O2BA 3HOWK 3GSIA 4BXXC 4A3EK 3WODA 4C3HK 2NVTK 3HOZC 4XSZA 1J6VA 5HL8A 3FOFA 4BKWA 5FLMC 3GEEA 3PO3C 5HL7S
chains in the Genus database with same CATH topology

#chains in the Genus database with same CATH superfamily
 3K7A C;  1TWF C;  4A3G C;  1TWG K;  3DXJ A;  3S2H K;  5M5W K;  5FLM K;  3S2D K;  2PA8 L;  3S17 C;  2NVY K;  4A3J K;  3PO3 K;  5FJ8 K;  1Y1W K;  2PMZ L;  3HKZ D;  3K7A K;  1TWF K;  4A3G K;  2A6H A;  4G7H A;  4Y52 C;  1YNN A;  4A93 C;  2R92 C;  2Y0S D;  4A3M C;  3I4N C;  3S1N C;  3S17 K;  1TWA C;  5IP9 C;  4QIW D;  4A93 K;  4Y52 K;  2R92 K;  4A3M K;  1I50 C;  1YNJ A;  2WB1 L;  3I4N K;  1TWA K;  4AYB L;  3S1N K;  4C3I C;  5IP9 K;  1SFO C;  4BBS C;  4QJV A;  1I50 K;  3HOX C;  4C3I K;  1SFO K;  4BBS K;  2NVX C;  3HOY C;  3HOX K;  3GTP C;  4LJZ A;  3CQZ C;  4A3B C;  1K83 C;  4C2M C;  3GTM C;  5IP7 C;  5D4D A;  3GTQ C;  3M4O C;  4C3J C;  4A3D C;  4YG2 A;  4G7O A;  1IW7 A;  3RZD C;  2O5J A;  3S1Q C;  1BDF A;  1R9T C;  2E2J C;  1SMY A;  4NOI A;  4A3F C;  3GTP K;  3CQZ K;  3HOY K;  4A3B K;  2JA8 C;  1K83 K;  4C2M K;  3GTQ K;  5IP7 K;  3GTM K;  3M4O K;  4A3D K;  2E2H C;  4MEY A;  4C3J K;  1TWH C;  3RZD K;  2E2I C;  1R9T K;  2E2J K;  3S1Q K;  4YFX A;  2WAQ L;  4A3F K;  5C4J C;  2JA8 K;  5IYB C;  4JK1 A;  3H3V D;  2E2H K;  4GZY A;  1TWH K;  2E2I K;  2A69 A;  4LLG A;  1I6V A;  3EQL A;  2VUM C;  5IYB K;  5C4J K;  4MEX A;  4OIQ A;  3GTJ C;  4XLP A;  5M5Y K;  4YFN A;  4BY1 C;  3GTO C;  2PA8 D;  4A3K C;  2VUM K;  2NVQ C;  4X6A C;  4A3I C;  5TMF A;  2PMZ D;  3HKZ L;  4YFK A;  2CW0 A;  3S1M C;  3GTJ K;  4XSX A;  4BY1 K;  4LK1 A;  3GTO K;  2Y0S L;  4A3K K;  2YU9 C;  2JA7 C;  3PO2 C;  2A6E A;  1I3Q C;  2NVQ K;  4X6A K;  4A3I K;  5C4X C;  2JA6 C;  3S1M K;  2A68 A;  2R7Z C;  5IYC C;  3S1R C;  3HOV C;  4Q4Z A;  1I6H K;  5C44 C;  3GTG C;  3RZO C;  3S14 C;  2YU9 K;  2WB1 D;  3H0G C;  4MQ9 A;  1ZYR A;  4BY7 C;  4AYB D;  1I3Q K;  5C4X K;  3PO2 K;  4A3L K;  2JA6 K;  2R7Z K;  1WCM C;  5IYC K;  4QJV B;  3S1R K;  3HOV K;  4OIO A;  4KN4 A;  4KN7 A;  5C44 K;  3GTG K;  1Y1V C;  5M5X K;  1XPP A;  3H0G K;  3RZO K;  3GTL C;  3S14 K;  4BY7 K;  3S16 C;  4Y7N C;  3FKI C;  1TWC C;  2B63 C;  2PPB A;  5TMC A;  4XLN A;  1WCM K;  3I4M C;  4KMU A;  4LK0 A;  2R93 C;  2JA7 K;  1Y1V K;  4OIN A;  3S15 C;  3GTL K;  3S16 K;  2O5I A;  4Y7N K;  3FKI K;  3HOZ K;  1TWC K;  2B63 K;  3HOW C;  3I4M K;  2R93 K;  2NVX K;  4BBR C;  4A3E C;  2JA5 C;  3GTK C;  3PO3 C;  3HOU C;  4A3C C;  1I6H C;  3S15 K;  5C3E C;  4C3H C;  4OIP A;  2BE5 A;  2NVT C;  5M3F K;  3HOW K;  4A3L C;  4ZH4 A;  5IYD C;  3M3Y C;  4BXX C;  4BBR K;  4A3E K;  2JA5 K;  3WOD A;  1HQM A;  2WAQ D;  4QIW L;  3GTK K;  4OIR A;  5C3E K;  4Q5S A;  4C3H K;  3HOU K;  4A3C K;  5M3M K;  2NVT K;  3HOZ C;  4XSZ A;  3H3V L;  5IYD K;  3M3Y K;  4BXX K;  1TWG C;  3S2H C;  5FLM C;  3S2D C;  2NVY C;  4A3J C;  4G7Z A;  1Y1W C; 
#chains in the Genus database with same CATH topology
 1HI9 A;  3FOE A;  2ZUF A;  1TWG K;  3S2H K;  3S2D K;  2NVY K;  2EBB A;  1Y1W K;  1TWF K;  2ZFZ A;  4GTA A;  5IOS A;  2Y0S D;  4A3M C;  3S1N C;  1DCO A;  3N0B A;  3GTQ A;  1YX2 A;  4BLB A;  4AYB L;  1J98 A;  5IP9 K;  1WQH A;  5CJ9 A;  1USO A;  3H0G A;  2GAH C;  3AD9 C;  1SFO K;  4WJ3 M;  2L3U A;  4BBS K;  5DM6 S;  1UV7 A;  2L5N A;  1VJE A;  1ZVU A;  4A3B C;  2B63 A;  1K83 C;  3SZY A;  5IP7 C;  4A3D C;  4C3J C;  4YG2 A;  4G7O A;  1IW7 A;  1F93 A;  1R9T C;  2E2J C;  4KDD A;  1VLO A;  3DLL S;  3CQZ K;  4FZB A;  4MEY A;  1TWH C;  2JH3 A;  1USM A;  3RZD K;  3S1Q K;  2WAQ L;  4A3F K;  2JA8 K;  5IYB C;  4JK1 A;  2JA6 A;  4GZY A;  3V4G A;  4LOW A;  1I6V A;  3ADA C;  4YFN A;  1WOR A;  2ZUE A;  2VUM K;  4GTC A;  2ZJQ S;  2PMZ D;  3AQO A;  3HKZ L;  3GTJ K;  4LK1 A;  3GTO K;  1JOE A;  2YU9 C;  3AD8 C;  5JVH S;  3S1M K;  2JA5 A;  1O25 A;  2WB1 D;  3H0G C;  1WOS A;  4KMA A;  3PO2 K;  5HQH A;  2RGR A;  1EK8 A;  5IYC K;  3S1R K;  4U67 S;  3RZO K;  2PHC B;  4BY7 K;  2B63 C;  1WCM K;  5JVG S;  2R93 C;  2KPU A;  1XXC A;  1TWC K;  1XZP A;  3HOW C;  4A3E C;  1F7U A;  3CQZ A;  1I6H C;  4C3H C;  4OIP A;  2NVT C;  4A3L C;  3GTK K;  1HQM A;  5M3M K;  3A8I A;  3H3V L;  5IYD K;  5L46 A;  2D6F C;  4GTF A;  1FEU A;  1TWG C;  3S2H C;  3S2D C;  2P8T A;  3NUH A;  2NVY C;  4G7Z A;  4XCH A;  1Y1W C;  3LAP A;  2GSN A;  3LYW A;  2FQT A;  1TWF C;  3OPF A;  3DXJ A;  4IOC S;  3GTJ A;  3K7A K;  3S17 K;  1WOP A;  4GTD A;  1K83 A;  4KMD A;  5IP9 C;  5JFE A;  4Y52 K;  1R9T A;  4A93 K;  5IOQ A;  2V6T A;  3I4N K;  4KAR A;  1TWA K;  3A8K A;  2W7V A;  4J3N A;  3HXA A;  4KAS A;  4GTL A;  1SFO C;  1TWH A;  4BBS C;  4QJV A;  4KM9 A;  1I50 K;  3VA7 A;  4G0U A;  2Y3P A;  3TFI A;  3TFH A;  4C3I K;  1C0A A;  3GDZ A;  1J6X A;  3CQZ C;  5D4D A;  2FQO A;  2O5J A;  3RZD C;  2NVX K;  5TJ3 A;  3S1Q C;  1BDF A;  3HOY K;  1SMY A;  4NOI A;  4A3F C;  1WSV A;  2JA8 C;  1IQ0 A;  1IS1 A;  3GTM K;  1JVI A;  1XXB A;  1GE9 A;  3GTK A;  1O2A A;  2YU9 A;  1VRQ C;  2E2H K;  2E2I K;  1O27 A;  2A69 A;  5C4J K;  2VUM C;  4OIQ A;  3GTJ C;  2CFA A;  1ZXO A;  3GTO C;  2PA8 D;  3S1M C;  4BY1 K;  2R93 A;  4PAB A;  2Y0S L;  4A3K K;  3PO2 C;  2A6E A;  4X6A K;  1XZQ A;  5IYC C;  3S1R C;  1B4A A;  1RU0 A;  3RZO C;  1TWA A;  1I3Q K;  4BY7 C;  3LAJ A;  5C4X K;  2R7Z K;  1WCM C;  4GT9 A;  3HOV K;  5C44 K;  1I50 A;  3GTG K;  3S14 K;  3GIR A;  4GFQ A;  1TWC C;  2PPB A;  4KMU A;  1TWG A;  1Y1V K;  3GTL K;  4GTE A;  2NVY A;  4KMH A;  2O5I A;  1Y1W A;  1YCL A;  4Y7N K;  1TWF A;  1PJ5 A;  1O26 A;  3GTK C;  1B4B A;  3S15 K;  3BP3 A;  2ZJR S;  5M3F K;  3T01 A;  5IYD C;  4QIW L;  2KXY A;  4OIR A;  4BLA A;  2E2H A;  2E2I A;  1BS2 A;  4ILD A;  3M3Y K;  4IO9 S;  4GTB A;  1VGX A;  3K7A C;  3G4C A;  3L4K A;  1SFO A;  3IPJ A;  5M5W K;  1DD5 A;  3S17 C;  4A3J K;  5FJ8 K;  2PMZ L;  3Q3Q A;  1X31 C;  4A3G K;  4G7H A;  4Y52 C;  1YNN A;  4A93 C;  1IE0 A;  4M1X A;  3I4N C;  1TWA C;  1G51 A;  3N3Y A;  2GAG C;  3MML B;  2R92 K;  1I50 C;  2WB1 L;  2R7Z A;  4C3I C;  1O28 A;  4LR2 A;  4P9S A;  4G0V A;  1Y1V A;  2NVX C;  4LQY A;  3HOY C;  2RH6 A;  3HOX K;  2VUM A;  2KQ1 A;  1XZP B;  3PIO S;  3GTM C;  5DM7 S;  4DDQ A;  1WQG A;  5JVO A;  3T00 A;  3GTO A;  3GTP K;  4C2M K;  3GTQ K;  2GSO A;  3M4O K;  4FM9 A;  2E2H C;  2V6S A;  2E2I C;  4YFX A;  5C4J C;  3N0C A;  3BUE A;  4WFA S;  4O2D A;  3EQL A;  4MEX A;  5M5Y K;  4XLP A;  4KAW X;  1WCM A;  4WF9 S;  4BY1 C;  1BGW A;  4A3K C;  3ORE A;  4X6A C;  1IL2 A;  1TWC A;  2CW0 A;  4XSX A;  2NVQ K;  1I3Q C;  1ISE A;  4A3I K;  5C4X C;  3G4A A;  2A68 A;  2R7Z C;  2R92 A;  1I6H K;  3HOV C;  4Q4Z A;  5C44 C;  2XCQ A;  3GTG C;  3S14 C;  2JA7 K;  1ZYR A;  4AYB D;  4A3L K;  2JA6 K;  4QJV B;  4OIO A;  2XCR B;  1Y1V C;  1XPP A;  3GTL C;  4WFB S;  2KWA A;  4KM8 A;  4Y7N C;  5TMC A;  1V5V A;  4LK0 A;  4OIN A;  1XXA A;  3S15 C;  1O29 A;  3S16 K;  3TFJ A;  1F7V A;  3FKI K;  3I4M K;  3GTP A;  4KB4 A;  1EQR A;  1AB4 A;  3TTG A;  1VH2 A;  5CHP A;  1WIH A;  4ZH4 A;  3L4J A;  3M3Y C;  4BBR K;  2JA5 K;  4KAT A;  3HOU K;  4A3C K;  2WAQ D;  5C3E K;  4Q5S A;  4P5B A;  1PJ6 A;  4BXX K;  4A3J C;  3S0X A;  3HOZ K;  4A3G C;  2CFA B;  1F9N A;  5FLM K;  2PA8 L;  3PO3 K;  3HKZ D;  3CF5 S;  2A6H A;  2NVX A;  1J6W A;  2R92 C;  1DCH A;  4WFN S;  4G0W A;  1XZQ B;  3GTM A;  1WOO A;  3AQP A;  4QIW D;  1JQW A;  2JA7 A;  3FHZ A;  1EFW A;  4A3M K;  1YNJ A;  3S1N K;  3HOX C;  4IOA S;  3AD7 C;  1WQF A;  1EI6 A;  4WCE S;  3GTP C;  4LJZ A;  2P5M A;  3FKI A;  4WJ4 A;  4C2M C;  3GTQ C;  3M4O C;  3T02 A;  1INN A;  3LPX A;  1EH1 A;  4A3B K;  1K83 K;  2GSU A;  5IP7 K;  4PAA A;  4A3D K;  4C3J K;  1R9T K;  2E2J K;  3AH5 A;  1IBA A;  1I3Q A;  1BJT A;  2V6U A;  3H3V D;  5EGE A;  1KQ4 A;  1TWH K;  1ZQ1 C;  4RMF A;  3GTG A;  4LLG A;  5IYB K;  1L0W A;  2XCO A;  3OEP A;  3GEI A;  3GTL A;  2NVQ C;  4A3I C;  5TMF A;  2ZJP S;  5EGH A;  4YFK A;  3ERE D;  3QX3 A;  4WIL A;  2JA7 C;  4P5A A;  2JA6 C;  3PIP S;  4AH6 A;  1O24 A;  2YU9 K;  1ZBS A;  4MQ9 A;  3CAG A;  5IOR A;  4C45 A;  4KN4 A;  4KN7 A;  5E68 A;  5IOT A;  5M5X K;  3H0G K;  3S16 C;  3BP8 C;  3FKI C;  4KC6 A;  4XLN A;  3I4M C;  3SZZ A;  3GEH A;  1O2F B;  4KB2 A;  3JST A;  2B63 K;  3A8J A;  1WSR A;  1DCP A;  4BBR C;  2JA5 C;  2R93 K;  1PJ7 A;  3HOU C;  4A3C C;  5C3E C;  2BE5 A;  1O2B A;  3HOW K;  3GSI A;  4BXX C;  4A3E K;  3WOD A;  4C3H K;  2NVT K;  3HOZ C;  4XSZ A;  1J6V A;  5HL8 A;  3FOF A;  4BKW A;  5FLM C;  3GEE A;  3PO3 C;  5HL7 S; 
#chains in the Genus database with same CATH homology
 3K7A C;  1TWF C;  4A3G C;  1TWG K;  3DXJ A;  3S2H K;  5M5W K;  5FLM K;  3S2D K;  2PA8 L;  3S17 C;  2NVY K;  4A3J K;  3PO3 K;  5FJ8 K;  1Y1W K;  2PMZ L;  3HKZ D;  3K7A K;  1TWF K;  4A3G K;  2A6H A;  4G7H A;  4Y52 C;  1YNN A;  4A93 C;  2R92 C;  2Y0S D;  4A3M C;  3I4N C;  3S1N C;  3S17 K;  1TWA C;  5IP9 C;  4QIW D;  4A93 K;  4Y52 K;  2R92 K;  4A3M K;  1I50 C;  1YNJ A;  2WB1 L;  3I4N K;  1TWA K;  4AYB L;  3S1N K;  4C3I C;  5IP9 K;  1SFO C;  4BBS C;  4QJV A;  1I50 K;  3HOX C;  4C3I K;  1SFO K;  4BBS K;  2NVX C;  3HOY C;  3HOX K;  3GTP C;  4LJZ A;  3CQZ C;  4A3B C;  1K83 C;  4C2M C;  3GTM C;  5IP7 C;  5D4D A;  3GTQ C;  3M4O C;  4C3J C;  4A3D C;  4YG2 A;  4G7O A;  1IW7 A;  3RZD C;  2O5J A;  3S1Q C;  1BDF A;  1R9T C;  2E2J C;  1SMY A;  4NOI A;  4A3F C;  3GTP K;  3CQZ K;  3HOY K;  4A3B K;  2JA8 C;  1K83 K;  4C2M K;  3GTQ K;  5IP7 K;  3GTM K;  3M4O K;  4A3D K;  2E2H C;  4MEY A;  4C3J K;  1TWH C;  3RZD K;  2E2I C;  1R9T K;  2E2J K;  3S1Q K;  4YFX A;  2WAQ L;  4A3F K;  5C4J C;  2JA8 K;  5IYB C;  4JK1 A;  3H3V D;  2E2H K;  4GZY A;  1TWH K;  2E2I K;  2A69 A;  4LLG A;  1I6V A;  3EQL A;  2VUM C;  5IYB K;  5C4J K;  4MEX A;  4OIQ A;  3GTJ C;  4XLP A;  5M5Y K;  4YFN A;  4BY1 C;  3GTO C;  2PA8 D;  4A3K C;  2VUM K;  2NVQ C;  4X6A C;  4A3I C;  5TMF A;  2PMZ D;  3HKZ L;  4YFK A;  2CW0 A;  3S1M C;  3GTJ K;  4XSX A;  4BY1 K;  4LK1 A;  3GTO K;  2Y0S L;  4A3K K;  2YU9 C;  2JA7 C;  3PO2 C;  2A6E A;  1I3Q C;  2NVQ K;  4X6A K;  4A3I K;  5C4X C;  2JA6 C;  3S1M K;  2A68 A;  2R7Z C;  5IYC C;  3S1R C;  3HOV C;  4Q4Z A;  1I6H K;  5C44 C;  3GTG C;  3RZO C;  3S14 C;  2YU9 K;  2WB1 D;  3H0G C;  4MQ9 A;  1ZYR A;  4BY7 C;  4AYB D;  1I3Q K;  5C4X K;  3PO2 K;  4A3L K;  2JA6 K;  2R7Z K;  1WCM C;  5IYC K;  4QJV B;  3S1R K;  3HOV K;  4OIO A;  4KN4 A;  4KN7 A;  5C44 K;  3GTG K;  1Y1V C;  5M5X K;  1XPP A;  3H0G K;  3RZO K;  3GTL C;  3S14 K;  4BY7 K;  3S16 C;  4Y7N C;  3FKI C;  1TWC C;  2B63 C;  2PPB A;  5TMC A;  4XLN A;  1WCM K;  3I4M C;  4KMU A;  4LK0 A;  2R93 C;  2JA7 K;  1Y1V K;  4OIN A;  3S15 C;  3GTL K;  3S16 K;  2O5I A;  4Y7N K;  3FKI K;  3HOZ K;  1TWC K;  2B63 K;  3HOW C;  3I4M K;  2R93 K;  2NVX K;  4BBR C;  4A3E C;  2JA5 C;  3GTK C;  3PO3 C;  3HOU C;  4A3C C;  1I6H C;  3S15 K;  5C3E C;  4C3H C;  4OIP A;  2BE5 A;  2NVT C;  5M3F K;  3HOW K;  4A3L C;  4ZH4 A;  5IYD C;  3M3Y C;  4BXX C;  4BBR K;  4A3E K;  2JA5 K;  3WOD A;  1HQM A;  2WAQ D;  4QIW L;  3GTK K;  4OIR A;  5C3E K;  4Q5S A;  4C3H K;  3HOU K;  4A3C K;  5M3M K;  2NVT K;  3HOZ C;  4XSZ A;  3H3V L;  5IYD K;  3M3Y K;  4BXX K;  1TWG C;  3S2H C;  5FLM C;  3S2D C;  2NVY C;  4A3J C;  4G7Z A;  1Y1W C;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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4OIRA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations