4A3DC

Rna polymerase ii initial transcribing complex with a 6nt dna-rna hybrid
Total Genus 61

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
61
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYS1 (7-13)TI1 (14-17)S12 (228-234)S2 (17-23)AH1 (27-40)AH4 (240-266)S10 (152-163)3H4 (168-170)S3 (42-54)S4 (72-74)AH2 (60-69)S8 (129-132)3H1 (77-79)TIV5 (124-127)TI2 (74-77)TI3 (92-95)TIV2 (88-91)3H3 (115-117)S5 (96-104)S9 (143-147)TIV4 (107-110)S6 (111-114)TI4 (136-139)TI5 (163-166)TIV7 (164-167)S11 (173-180)TI6 (184-187)TVIII2 (181-184)3H5 (205-209)AH3 (197-200)TVIII3 (187-190)TIV8 (193-196)TIV10 (220-223)TVIII4 (236-239)TIV6 (148-151)3H2 (83-85)S7 (119-120)O1 (104-106)TIV1 (22-25)Updating...
connected with : NaN
molecule tags Transcription
publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
total genus 61
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3dC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3dC01
1I50C 3H3VL 4OIOA 4C3HK 4QJVB 4Y52K 4BXXC 4A3CK 1YNJA 3EQLA 3RZDK 5M3MK 4A3JK 3HOVC 4A3IK 4A3LK 1XPPA 3K7AK 2O5IA 2NVXK 2JA5C 3HOXC 3S2DC 4A3GK 2JA7K 4Q5SA 3PO2K 2Y0SL 3S1QK 4C3JC 1TWGC 4A3EC 1TWCC 3PO3C 2JA5K 1K83C 4X6AK 5IYDK 4LLGA 4XLNA 2NVYC 2O5JA 4A3KC 1Y1VC 3GTKC 3HOUC 2A6EA 4A3JC 4AYBL 3GTJK 4C3JK 1HQMA 2WAQD 4C3HC 4Y52C 2E2HK 4MEXA 4Y7NK 1TWHK 3RZDC 4XSZA 2A68A 2PPBA 4A3IC 3HOUK 5IYBK 3K7AC 5C44K 5TMCA 2WB1D 2NVXC 3HKZL 4Q4ZA 4G7ZA 5C4XK 4A3GC 2JA7C 3PO2C 3S1QC 4A3MK 1YNNA 3GTMC 3WODA 3HOZC 3CQZK 4A93K 5IYDC 4X6AC 4BY7K 4QIWD 2R92C 2PA8L 4A3FK 3I4MC 3S15K 2R7ZC 3GTQK 4A3CC 3HOYK 3GTJC 2B63K 3GTMK 2E2HC 4A3BC 3HOZK 4Y7NC 3H3VD 1TWHC 4BBSK 1I3QC 4C2MK 4YFKA 2R92K 3S14K 3I4MK 4XLPA 5IYBC 4OIPA 5C44C 3GTGK 5FLMK 4A3BK 1R9TK 5C4XC 1I3QK 3M4OK 5M5XK 3GTPK 4NOIA 4A3MC 1ZYRA 4YFXA 4BY1K 1SFOC 5TMFA 2Y0SD 3CQZC 4A93C 4A3KK 1WCMC 4BY7C 3S1RK 2VUMK 3S2HK 4YG2A 4A3FC 4XSXA 4LK0A 3S1NK 5IYCK 3S15C 2PMZL 3GTQC 3HOYC 3RZOK 2B63C 3GTLK 1SFOK 2CW0A 4YFNA 4OINA 4BBRK 1SMYA 4AYBD 5C3EK 4BBSC 1WCMK 2E2JK 3GTOK 3S17K 4C2MC 4OIRA 4A3DC 3FKIK 3S14C 1TWFK 3S1MK 3GTGC 2YU9K 5FLMC 5M3FK 4KN7A 1R9TC 4GZYA 3M4OC 2R7ZK 3HKZD 2R93K 4C3IK 3GTPC 2JA8K 3M3YK 4A3DK 3HOWK 4BY1C 4G7OA 2VUMC 3S2HC 5C4JK 3S1RC 4KN4A 3DXJA 4QJVA 3S1NC 5IYCC 3RZOC 2E2IK 5IP9K 1I6HC 2PA8D 2NVQK 3I4NC 5M5WK 2JA6K 5D4DA 3GTLC 2WAQL 5C3EC 4BBRC 3H0GK 1TWAK 3S16K 3GTOC 2E2JC 3S17C 1I50K 3FKIC 4BXXK 4OIQA 4MEYA 1TWFC 1I6HK 3S1MC 5IP7C 3I4NK 2YU9C 2NVTC 5M5YK 3HOVK 1Y1VK 2WB1L 4LK1A 1I6VA 2R93C 4ZH4A 4C3IC 4G7HA 2JA8C 3M3YC 1BDFA 1Y1WC 5FJ8K 2A6HA 3HOXK 3HOWC 3GTKK 4KMUA 3S2DK 5IP7K 2NVTK 5C4JC 4JK1A 2A69A 2BE5A 1TWGK 4A3EK 1TWCK 4LJZA 4QIWL 2NVQC 2E2IC 4MQ9A 5IP9C 1Y1WK 1K83K 3PO3K 1IW7A 2NVYK 2JA6C 2PMZD 3H0GC 3S16C 1TWAC 4A3LC
chains in the Genus database with same CATH superfamily
3PIOS 3FHZA 4OIOA 4BXXC 3N0CA 3RZDK 3AH5A 2XCRB 1VRQC 1XPPA 1IL2A 4GT9A 2R92A 2NVXK 3GTGA 2JA7K 4IOCS 4C3JC 1TWCC 2FQOA 2W7VA 4LLGA 4XLNA 1FEUA 3HOUC 2R7ZK 2A6EA 4C3JK 4Y52C 2ZUEA 3SZYA 2PPBA 1WQGA 3HOUK 4KMAA 3MMLB 4G0UA 4DDQA 5C44K 1TWFA 5C4XK 1USOA 2YU9A 1XXAA 3S1QC 1YNNA 2R93A 3A8KA 3CQZK 5EGHA 4A3FK 4Y7NC 1I3QC 4YFKA 1F7UA 2FQTA 5IYBC 2XCOA 1R9TK 1I3QK 3CF5S 2GAGC 3GTPK 1DCPA 3AQPA 1BJTA 4YFXA 4BY1K 2Y0SD 2VUMK 4BY7C 3S1RK 4YG2A 1O26A 4LK0A 1DCHA 1XZQB 2PMZL 3GTQC 3HOYC 2B63C 3IPJA 1TWCA 4YFNA 4C2MC 2ZUFA 3OREA 4GZYA 3HKZD 3M3YK 1O29A 5TJ3A 2JH3A 3LYWA 3NUHA 4QJVA 3G4AA 2PA8D 4KAWX 4G0VA 2JA6K 1GE9A 3H0GK 4WILA 3T02A 3DLLS 3FKIC 3GEEA 4OIQA 4MEYA 3AD9C 1JOEA 2NVTC 5EGEA 4LK1A 3G4CA 3HOWC 3S2DK 2NVTK 3VA7A 4JK1A 2P8TA 4QIWL 2NVQC 2E2IC 3GEIA 1YCLA 4A3JC 1WQHA 3CAGA 1Y1VK 1TWAC 1VGXA 1I50C 3JSTA 4GTBA 3GTQA 1YNJA 1UV7A 2B63A 3GTMA 3EQLA 5IOTA 1XXBA 5E68A 4A3JK 1IE0A 2O5IA 4AH6A 4IO9S 2JA5C 3HOXC 4KARA 2RGRA 4A3GK 1F9NA 5HL8A 1EH1A 3PO3C 2JA5K 4X6AK 4A3KC 5JVHS 3BP8C 3GTJK 4AYBL 3V4GA 1TWHK 2ZJPS 3RZDC 1O2BA 4GTFA 1WSRA 1WCMA 3GSIA 3FKIA 5TMCA 2WB1D 2NVXC 1USMA 2JA7C 1F93A 4A3MK 1WORA 3WODA 4A93K 4ILDA 4IOAS 1WOSA 2R7ZC 3S15K 2GAHC 4LQYA 4A3BC 2E2IA 3FOFA 3H3VD 1O25A 4BLAA 1TWAA 3FOEA 3S14K 1I50A 5C44C 1O27A 4A3BK 4KB2A 1WOOA 5C4XC 3S0XA 1KQ4A 3M4OK 4WF9S 1SFOC 4GFQA 3CQZC 3S2HK 5L46A 4A3FC 4XSXA 4GTLA 3S1NK 5HQHA 1V5VA 1ZXOA 1J6XA 3GTLK 1SFOK 3GTOK 4OIRA 4A3DC 1XXCA 3PIPS 5JVOA 1O24A 5M3FK 2L5NA 4KN7A 1R9TC 4PAAA 3GTPC 4C3IK 2JA8K 4A3DK 1JQWA 2XCQA 4BY1C 3AQOA 4G7OA 2NVXA 2VUMC 3S1RC 3BP3A 2JA7A 1C0AA 5IP9K 1I6HC 4GTCA 1INNA 5M5WK 3S16K 2L3UA 3OEPA 2R7ZA 1I6HK 3N0BA 5M5YK 3HOVK 2KWAA 4ZH4A 3M3YC 2V6SA 3LPXA 1BDFA 1Y1WC 1IS1A 2A6HA 2A69A 3L4JA 1ISEA 1TWGK 4A3EK 1PJ6A 4GTDA 4KMHA 4LJZA 4KM8A 1B4AA 1K83K 1Y1WK 1IW7A 1AB4A 2JA6C 2NVYK 1PJ7A 3H0GC 3CQZA 4A3LC 3GTKK 4C3HK 4QJVB 1VJEA 4PABA 3TFIA 1VH2A 4A3IK 4A3LK 3GDZA 3K7AK 1BS2A 5IORA 3TFJA 4KM9A 3S2DC 3PO2K 4Q5SA 1R9TA 2Y0SL 1I3QA 4BLBA 3LAJA 4WFBS 1ZBSA 3GTPA 4M1XA 5IYDK 3A8JA 4KASA 2VUMA 1Y1VC 3GEHA 4A3CK 1B4BA 2WAQD 2E2HK 2GSNA 3T00A 3HKZL 4G7ZA 2GSUA 4A3GC 4X6AC 1L0WA 2R92C 2PA8L 1J98A 3I4MC 3GTJC 1DCOA 4FM9A 3AD8C 1TWHC 1J6WA 4BBSK 2JA6A 3H0GA 2R92K 3I4MK 4WJ3M 4OIPA 3GTGK 5FLMK 3TFHA 5M5XK 4A3MC 1ZYRA 3HXAA 3QX3A 5TMFA 4BKWA 4A93C 5IYCK 3S15C 3RZOK 4WJ4A 5DM6S 4P5AA 4BBRK 5C3EK 1SMYA 2E2JK 5JVGS 3S17K 1Y1VA 3S14C 1TWFK 3S1MK 2YU9K 4KDDA 5IOQA 3ADAC 2R93K 3M4OC 4GTEA 3S2HC 1F7VA 5C4JK 3DXJA 5HL7S 3S1NC 3BUEA 3N3YA 3GTLC 3ERED 2JA5A 4WCES 3GTOC 3AD7C 4BXXK 3GTJA 1VLOA 5IP7C 1TWHA 2WB1L 4XCHA 3L4KA 4C3IC 2JA8C 1EFWA 4KMUA 2V6TA 5IP7K 4FZBA 3SZZA 3Q3QA 1TWCK 4MQ9A 5IP9C 1JVIA 5JFEA 2PMZD 4WFAS 2PHCB 3S16C 3OPFA 5CJ9A 3H3VL 4Y52K 5IOSA 4P9SA 3GIRA 1G51A 5M3MK 2V6UA 2ZJQS 3HOVC 1RU0A 1DD5A 4LOWA 3S1QK 1PJ5A 1YX2A 1TWGC 4A3EC 2KXYA 4P5BA 2EBBA 2D6FC 1K83C 3TTGA 2NVYC 2O5JA 4LR2A 3GTKC 4KC6A 1HQMA 4C3HC 4WFNS 1BGWA 4MEXA 4Y7NK 1ZVUA 4RMFA 4XSZA 2A68A 1WSVA 1SFOA 3GTLA 1XZPB 1IBAA 4A3IC 3GTOA 1XZPA 5IYBK 3K7AC 2RH6A 4Q4ZA 2P5MA 5CHPA 3PO2C 1XZQA 3GTMC 3HOZC 2KPUA 5IYDC 4BY7K 4QIWD 3GTQK 4A3CC 1X31C 2B63K 3HOYK 3GTMK 2E2HC 3HOZK 4C2MK 4O2DA 2ZFZA 4XLPA 1O28A 1WQFA 4U67S 4KMDA 1J6VA 4NOIA 4C45A 5DM7S 2ZJRS 1WCMC 2CFAB 2CFAA 1TWGA 1O2FB 1EK8A 3A8IA 2CW0A 4OINA 4AYBD 1K83A 1Y1WA 4BBSC 1WCMK 2NVYA 3FKIK 2Y3PA 3GTKA 4GTAA 3GTGC 5FLMC 3T01A 1EQRA 1HI9A 3HOWK 4KN4A 2GSOA 4KATA 5IYCC 3RZOC 3LAPA 2E2IK 2NVQK 3I4NC 5D4DA 2WAQL 5C3EC 4BBRC 1TWAK 1WOPA 2E2JC 3S17C 1I50K 1ZQ1C 1TWFC 2E2HA 3S1MC 3I4NK 2YU9C 1WIHA 4KB4A 1I6VA 2R93C 4G7HA 4G0WA 1O2AA 1IQ0A 5FJ8K 3HOXK 5C4JC 2KQ1A 2BE5A 1EI6A 3PO3K 4J3NA 4A3KK
chains in the Genus database with same CATH topology
1I50C 3H3VL 4OIOA 4C3HK 4QJVB 4Y52K 4BXXC 4A3CK 1YNJA 3EQLA 3RZDK 5M3MK 4A3JK 3HOVC 4A3IK 4A3LK 1XPPA 3K7AK 2O5IA 2NVXK 2JA5C 3HOXC 3S2DC 4A3GK 2JA7K 4Q5SA 3PO2K 2Y0SL 3S1QK 4C3JC 1TWGC 4A3EC 1TWCC 3PO3C 2JA5K 1K83C 4X6AK 5IYDK 4LLGA 4XLNA 2NVYC 2O5JA 4A3KC 1Y1VC 3GTKC 3HOUC 2A6EA 4A3JC 4AYBL 3GTJK 4C3JK 1HQMA 2WAQD 4C3HC 4Y52C 2E2HK 4MEXA 4Y7NK 1TWHK 3RZDC 4XSZA 2A68A 2PPBA 4A3IC 3HOUK 5IYBK 3K7AC 5C44K 5TMCA 2WB1D 2NVXC 3HKZL 4Q4ZA 4G7ZA 5C4XK 4A3GC 2JA7C 3PO2C 3S1QC 4A3MK 1YNNA 3GTMC 3WODA 3HOZC 3CQZK 4A93K 5IYDC 4X6AC 4BY7K 4QIWD 2R92C 2PA8L 4A3FK 3I4MC 3S15K 2R7ZC 3GTQK 4A3CC 3HOYK 3GTJC 2B63K 3GTMK 2E2HC 4A3BC 3HOZK 4Y7NC 3H3VD 1TWHC 4BBSK 1I3QC 4C2MK 4YFKA 2R92K 3S14K 3I4MK 4XLPA 5IYBC 4OIPA 5C44C 3GTGK 5FLMK 4A3BK 1R9TK 5C4XC 1I3QK 3M4OK 5M5XK 3GTPK 4NOIA 4A3MC 1ZYRA 4YFXA 4BY1K 1SFOC 5TMFA 2Y0SD 3CQZC 4A93C 4A3KK 1WCMC 4BY7C 3S1RK 2VUMK 3S2HK 4YG2A 4A3FC 4XSXA 4LK0A 3S1NK 5IYCK 3S15C 2PMZL 3GTQC 3HOYC 3RZOK 2B63C 3GTLK 1SFOK 2CW0A 4YFNA 4OINA 4BBRK 1SMYA 4AYBD 5C3EK 4BBSC 1WCMK 2E2JK 3GTOK 3S17K 4C2MC 4OIRA 4A3DC 3FKIK 3S14C 1TWFK 3S1MK 3GTGC 2YU9K 5FLMC 5M3FK 4KN7A 1R9TC 4GZYA 3M4OC 2R7ZK 3HKZD 2R93K 4C3IK 3GTPC 2JA8K 3M3YK 4A3DK 3HOWK 4BY1C 4G7OA 2VUMC 3S2HC 5C4JK 3S1RC 4KN4A 3DXJA 4QJVA 3S1NC 5IYCC 3RZOC 2E2IK 5IP9K 1I6HC 2PA8D 2NVQK 3I4NC 5M5WK 2JA6K 5D4DA 3GTLC 2WAQL 5C3EC 4BBRC 3H0GK 1TWAK 3S16K 3GTOC 2E2JC 3S17C 1I50K 3FKIC 4BXXK 4OIQA 4MEYA 1TWFC 1I6HK 3S1MC 5IP7C 3I4NK 2YU9C 2NVTC 5M5YK 3HOVK 1Y1VK 2WB1L 4LK1A 1I6VA 2R93C 4ZH4A 4C3IC 4G7HA 2JA8C 3M3YC 1BDFA 1Y1WC 5FJ8K 2A6HA 3HOXK 3HOWC 3GTKK 4KMUA 3S2DK 5IP7K 2NVTK 5C4JC 4JK1A 2A69A 2BE5A 1TWGK 4A3EK 1TWCK 4LJZA 4QIWL 2NVQC 2E2IC 4MQ9A 5IP9C 1Y1WK 1K83K 3PO3K 1IW7A 2NVYK 2JA6C 2PMZD 3H0GC 3S16C 1TWAC 4A3LC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1I50 C;  3H3V L;  4OIO A;  4C3H K;  4QJV B;  4Y52 K;  4BXX C;  4A3C K;  1YNJ A;  3EQL A;  3RZD K;  5M3M K;  4A3J K;  3HOV C;  4A3I K;  4A3L K;  1XPP A;  3K7A K;  2O5I A;  2NVX K;  2JA5 C;  3HOX C;  3S2D C;  4A3G K;  2JA7 K;  4Q5S A;  3PO2 K;  2Y0S L;  3S1Q K;  4C3J C;  1TWG C;  4A3E C;  1TWC C;  3PO3 C;  2JA5 K;  1K83 C;  4X6A K;  5IYD K;  4LLG A;  4XLN A;  2NVY C;  2O5J A;  4A3K C;  1Y1V C;  3GTK C;  3HOU C;  2A6E A;  4A3J C;  4AYB L;  3GTJ K;  4C3J K;  1HQM A;  2WAQ D;  4C3H C;  4Y52 C;  2E2H K;  4MEX A;  4Y7N K;  1TWH K;  3RZD C;  4XSZ A;  2A68 A;  2PPB A;  4A3I C;  3HOU K;  5IYB K;  3K7A C;  5C44 K;  5TMC A;  2WB1 D;  2NVX C;  3HKZ L;  4Q4Z A;  4G7Z A;  5C4X K;  4A3G C;  2JA7 C;  3PO2 C;  3S1Q C;  4A3M K;  1YNN A;  3GTM C;  3WOD A;  3HOZ C;  3CQZ K;  4A93 K;  5IYD C;  4X6A C;  4BY7 K;  4QIW D;  2R92 C;  2PA8 L;  4A3F K;  3I4M C;  3S15 K;  2R7Z C;  3GTQ K;  4A3C C;  3HOY K;  3GTJ C;  2B63 K;  3GTM K;  2E2H C;  4A3B C;  3HOZ K;  4Y7N C;  3H3V D;  1TWH C;  4BBS K;  1I3Q C;  4C2M K;  4YFK A;  2R92 K;  3S14 K;  3I4M K;  4XLP A;  5IYB C;  4OIP A;  5C44 C;  3GTG K;  5FLM K;  4A3B K;  1R9T K;  5C4X C;  1I3Q K;  3M4O K;  5M5X K;  3GTP K;  4NOI A;  4A3M C;  1ZYR A;  4YFX A;  4BY1 K;  1SFO C;  5TMF A;  2Y0S D;  3CQZ C;  4A93 C;  4A3K K;  1WCM C;  4BY7 C;  3S1R K;  2VUM K;  3S2H K;  4YG2 A;  4A3F C;  4XSX A;  4LK0 A;  3S1N K;  5IYC K;  3S15 C;  2PMZ L;  3GTQ C;  3HOY C;  3RZO K;  2B63 C;  3GTL K;  1SFO K;  2CW0 A;  4YFN A;  4OIN A;  4BBR K;  1SMY A;  4AYB D;  5C3E K;  4BBS C;  1WCM K;  2E2J K;  3GTO K;  3S17 K;  4C2M C;  4OIR A;  4A3D C;  3FKI K;  3S14 C;  1TWF K;  3S1M K;  3GTG C;  2YU9 K;  5FLM C;  5M3F K;  4KN7 A;  1R9T C;  4GZY A;  3M4O C;  2R7Z K;  3HKZ D;  2R93 K;  4C3I K;  3GTP C;  2JA8 K;  3M3Y K;  4A3D K;  3HOW K;  4BY1 C;  4G7O A;  2VUM C;  3S2H C;  5C4J K;  3S1R C;  4KN4 A;  3DXJ A;  4QJV A;  3S1N C;  5IYC C;  3RZO C;  2E2I K;  5IP9 K;  1I6H C;  2PA8 D;  2NVQ K;  3I4N C;  5M5W K;  2JA6 K;  5D4D A;  3GTL C;  2WAQ L;  5C3E C;  4BBR C;  3H0G K;  1TWA K;  3S16 K;  3GTO C;  2E2J C;  3S17 C;  1I50 K;  3FKI C;  4BXX K;  4OIQ A;  4MEY A;  1TWF C;  1I6H K;  3S1M C;  5IP7 C;  3I4N K;  2YU9 C;  2NVT C;  5M5Y K;  3HOV K;  1Y1V K;  2WB1 L;  4LK1 A;  1I6V A;  2R93 C;  4ZH4 A;  4C3I C;  4G7H A;  2JA8 C;  3M3Y C;  1BDF A;  1Y1W C;  5FJ8 K;  2A6H A;  3HOX K;  3HOW C;  3GTK K;  4KMU A;  3S2D K;  5IP7 K;  2NVT K;  5C4J C;  4JK1 A;  2A69 A;  2BE5 A;  1TWG K;  4A3E K;  1TWC K;  4LJZ A;  4QIW L;  2NVQ C;  2E2I C;  4MQ9 A;  5IP9 C;  1Y1W K;  1K83 K;  3PO3 K;  1IW7 A;  2NVY K;  2JA6 C;  2PMZ D;  3H0G C;  3S16 C;  1TWA C;  4A3L C; 
#chains in the Genus database with same CATH topology
 3PIO S;  3FHZ A;  4OIO A;  4BXX C;  3N0C A;  3RZD K;  3AH5 A;  2XCR B;  1VRQ C;  1XPP A;  1IL2 A;  4GT9 A;  2R92 A;  2NVX K;  3GTG A;  2JA7 K;  4IOC S;  4C3J C;  1TWC C;  2FQO A;  2W7V A;  4LLG A;  4XLN A;  1FEU A;  3HOU C;  2R7Z K;  2A6E A;  4C3J K;  4Y52 C;  2ZUE A;  3SZY A;  2PPB A;  1WQG A;  3HOU K;  4KMA A;  3MML B;  4G0U A;  4DDQ A;  5C44 K;  1TWF A;  5C4X K;  1USO A;  2YU9 A;  1XXA A;  3S1Q C;  1YNN A;  2R93 A;  3A8K A;  3CQZ K;  5EGH A;  4A3F K;  4Y7N C;  1I3Q C;  4YFK A;  1F7U A;  2FQT A;  5IYB C;  2XCO A;  1R9T K;  1I3Q K;  3CF5 S;  2GAG C;  3GTP K;  1DCP A;  3AQP A;  1BJT A;  4YFX A;  4BY1 K;  2Y0S D;  2VUM K;  4BY7 C;  3S1R K;  4YG2 A;  1O26 A;  4LK0 A;  1DCH A;  1XZQ B;  2PMZ L;  3GTQ C;  3HOY C;  2B63 C;  3IPJ A;  1TWC A;  4YFN A;  4C2M C;  2ZUF A;  3ORE A;  4GZY A;  3HKZ D;  3M3Y K;  1O29 A;  5TJ3 A;  2JH3 A;  3LYW A;  3NUH A;  4QJV A;  3G4A A;  2PA8 D;  4KAW X;  4G0V A;  2JA6 K;  1GE9 A;  3H0G K;  4WIL A;  3T02 A;  3DLL S;  3FKI C;  3GEE A;  4OIQ A;  4MEY A;  3AD9 C;  1JOE A;  2NVT C;  5EGE A;  4LK1 A;  3G4C A;  3HOW C;  3S2D K;  2NVT K;  3VA7 A;  4JK1 A;  2P8T A;  4QIW L;  2NVQ C;  2E2I C;  3GEI A;  1YCL A;  4A3J C;  1WQH A;  3CAG A;  1Y1V K;  1TWA C;  1VGX A;  1I50 C;  3JST A;  4GTB A;  3GTQ A;  1YNJ A;  1UV7 A;  2B63 A;  3GTM A;  3EQL A;  5IOT A;  1XXB A;  5E68 A;  4A3J K;  1IE0 A;  2O5I A;  4AH6 A;  4IO9 S;  2JA5 C;  3HOX C;  4KAR A;  2RGR A;  4A3G K;  1F9N A;  5HL8 A;  1EH1 A;  3PO3 C;  2JA5 K;  4X6A K;  4A3K C;  5JVH S;  3BP8 C;  3GTJ K;  4AYB L;  3V4G A;  1TWH K;  2ZJP S;  3RZD C;  1O2B A;  4GTF A;  1WSR A;  1WCM A;  3GSI A;  3FKI A;  5TMC A;  2WB1 D;  2NVX C;  1USM A;  2JA7 C;  1F93 A;  4A3M K;  1WOR A;  3WOD A;  4A93 K;  4ILD A;  4IOA S;  1WOS A;  2R7Z C;  3S15 K;  2GAH C;  4LQY A;  4A3B C;  2E2I A;  3FOF A;  3H3V D;  1O25 A;  4BLA A;  1TWA A;  3FOE A;  3S14 K;  1I50 A;  5C44 C;  1O27 A;  4A3B K;  4KB2 A;  1WOO A;  5C4X C;  3S0X A;  1KQ4 A;  3M4O K;  4WF9 S;  1SFO C;  4GFQ A;  3CQZ C;  3S2H K;  5L46 A;  4A3F C;  4XSX A;  4GTL A;  3S1N K;  5HQH A;  1V5V A;  1ZXO A;  1J6X A;  3GTL K;  1SFO K;  3GTO K;  4OIR A;  4A3D C;  1XXC A;  3PIP S;  5JVO A;  1O24 A;  5M3F K;  2L5N A;  4KN7 A;  1R9T C;  4PAA A;  3GTP C;  4C3I K;  2JA8 K;  4A3D K;  1JQW A;  2XCQ A;  4BY1 C;  3AQO A;  4G7O A;  2NVX A;  2VUM C;  3S1R C;  3BP3 A;  2JA7 A;  1C0A A;  5IP9 K;  1I6H C;  4GTC A;  1INN A;  5M5W K;  3S16 K;  2L3U A;  3OEP A;  2R7Z A;  1I6H K;  3N0B A;  5M5Y K;  3HOV K;  2KWA A;  4ZH4 A;  3M3Y C;  2V6S A;  3LPX A;  1BDF A;  1Y1W C;  1IS1 A;  2A6H A;  2A69 A;  3L4J A;  1ISE A;  1TWG K;  4A3E K;  1PJ6 A;  4GTD A;  4KMH A;  4LJZ A;  4KM8 A;  1B4A A;  1K83 K;  1Y1W K;  1IW7 A;  1AB4 A;  2JA6 C;  2NVY K;  1PJ7 A;  3H0G C;  3CQZ A;  4A3L C;  3GTK K;  4C3H K;  4QJV B;  1VJE A;  4PAB A;  3TFI A;  1VH2 A;  4A3I K;  4A3L K;  3GDZ A;  3K7A K;  1BS2 A;  5IOR A;  3TFJ A;  4KM9 A;  3S2D C;  3PO2 K;  4Q5S A;  1R9T A;  2Y0S L;  1I3Q A;  4BLB A;  3LAJ A;  4WFB S;  1ZBS A;  3GTP A;  4M1X A;  5IYD K;  3A8J A;  4KAS A;  2VUM A;  1Y1V C;  3GEH A;  4A3C K;  1B4B A;  2WAQ D;  2E2H K;  2GSN A;  3T00 A;  3HKZ L;  4G7Z A;  2GSU A;  4A3G C;  4X6A C;  1L0W A;  2R92 C;  2PA8 L;  1J98 A;  3I4M C;  3GTJ C;  1DCO A;  4FM9 A;  3AD8 C;  1TWH C;  1J6W A;  4BBS K;  2JA6 A;  3H0G A;  2R92 K;  3I4M K;  4WJ3 M;  4OIP A;  3GTG K;  5FLM K;  3TFH A;  5M5X K;  4A3M C;  1ZYR A;  3HXA A;  3QX3 A;  5TMF A;  4BKW A;  4A93 C;  5IYC K;  3S15 C;  3RZO K;  4WJ4 A;  5DM6 S;  4P5A A;  4BBR K;  5C3E K;  1SMY A;  2E2J K;  5JVG S;  3S17 K;  1Y1V A;  3S14 C;  1TWF K;  3S1M K;  2YU9 K;  4KDD A;  5IOQ A;  3ADA C;  2R93 K;  3M4O C;  4GTE A;  3S2H C;  1F7V A;  5C4J K;  3DXJ A;  5HL7 S;  3S1N C;  3BUE A;  3N3Y A;  3GTL C;  3ERE D;  2JA5 A;  4WCE S;  3GTO C;  3AD7 C;  4BXX K;  3GTJ A;  1VLO A;  5IP7 C;  1TWH A;  2WB1 L;  4XCH A;  3L4K A;  4C3I C;  2JA8 C;  1EFW A;  4KMU A;  2V6T A;  5IP7 K;  4FZB A;  3SZZ A;  3Q3Q A;  1TWC K;  4MQ9 A;  5IP9 C;  1JVI A;  5JFE A;  2PMZ D;  4WFA S;  2PHC B;  3S16 C;  3OPF A;  5CJ9 A;  3H3V L;  4Y52 K;  5IOS A;  4P9S A;  3GIR A;  1G51 A;  5M3M K;  2V6U A;  2ZJQ S;  3HOV C;  1RU0 A;  1DD5 A;  4LOW A;  3S1Q K;  1PJ5 A;  1YX2 A;  1TWG C;  4A3E C;  2KXY A;  4P5B A;  2EBB A;  2D6F C;  1K83 C;  3TTG A;  2NVY C;  2O5J A;  4LR2 A;  3GTK C;  4KC6 A;  1HQM A;  4C3H C;  4WFN S;  1BGW A;  4MEX A;  4Y7N K;  1ZVU A;  4RMF A;  4XSZ A;  2A68 A;  1WSV A;  1SFO A;  3GTL A;  1XZP B;  1IBA A;  4A3I C;  3GTO A;  1XZP A;  5IYB K;  3K7A C;  2RH6 A;  4Q4Z A;  2P5M A;  5CHP A;  3PO2 C;  1XZQ A;  3GTM C;  3HOZ C;  2KPU A;  5IYD C;  4BY7 K;  4QIW D;  3GTQ K;  4A3C C;  1X31 C;  2B63 K;  3HOY K;  3GTM K;  2E2H C;  3HOZ K;  4C2M K;  4O2D A;  2ZFZ A;  4XLP A;  1O28 A;  1WQF A;  4U67 S;  4KMD A;  1J6V A;  4NOI A;  4C45 A;  5DM7 S;  2ZJR S;  1WCM C;  2CFA B;  2CFA A;  1TWG A;  1O2F B;  1EK8 A;  3A8I A;  2CW0 A;  4OIN A;  4AYB D;  1K83 A;  1Y1W A;  4BBS C;  1WCM K;  2NVY A;  3FKI K;  2Y3P A;  3GTK A;  4GTA A;  3GTG C;  5FLM C;  3T01 A;  1EQR A;  1HI9 A;  3HOW K;  4KN4 A;  2GSO A;  4KAT A;  5IYC C;  3RZO C;  3LAP A;  2E2I K;  2NVQ K;  3I4N C;  5D4D A;  2WAQ L;  5C3E C;  4BBR C;  1TWA K;  1WOP A;  2E2J C;  3S17 C;  1I50 K;  1ZQ1 C;  1TWF C;  2E2H A;  3S1M C;  3I4N K;  2YU9 C;  1WIH A;  4KB4 A;  1I6V A;  2R93 C;  4G7H A;  4G0W A;  1O2A A;  1IQ0 A;  5FJ8 K;  3HOX K;  5C4J C;  2KQ1 A;  2BE5 A;  1EI6 A;  3PO3 K;  4J3N A;  4A3K K; 
#chains in the Genus database with same CATH homology
 1I50 C;  3H3V L;  4OIO A;  4C3H K;  4QJV B;  4Y52 K;  4BXX C;  4A3C K;  1YNJ A;  3EQL A;  3RZD K;  5M3M K;  4A3J K;  3HOV C;  4A3I K;  4A3L K;  1XPP A;  3K7A K;  2O5I A;  2NVX K;  2JA5 C;  3HOX C;  3S2D C;  4A3G K;  2JA7 K;  4Q5S A;  3PO2 K;  2Y0S L;  3S1Q K;  4C3J C;  1TWG C;  4A3E C;  1TWC C;  3PO3 C;  2JA5 K;  1K83 C;  4X6A K;  5IYD K;  4LLG A;  4XLN A;  2NVY C;  2O5J A;  4A3K C;  1Y1V C;  3GTK C;  3HOU C;  2A6E A;  4A3J C;  4AYB L;  3GTJ K;  4C3J K;  1HQM A;  2WAQ D;  4C3H C;  4Y52 C;  2E2H K;  4MEX A;  4Y7N K;  1TWH K;  3RZD C;  4XSZ A;  2A68 A;  2PPB A;  4A3I C;  3HOU K;  5IYB K;  3K7A C;  5C44 K;  5TMC A;  2WB1 D;  2NVX C;  3HKZ L;  4Q4Z A;  4G7Z A;  5C4X K;  4A3G C;  2JA7 C;  3PO2 C;  3S1Q C;  4A3M K;  1YNN A;  3GTM C;  3WOD A;  3HOZ C;  3CQZ K;  4A93 K;  5IYD C;  4X6A C;  4BY7 K;  4QIW D;  2R92 C;  2PA8 L;  4A3F K;  3I4M C;  3S15 K;  2R7Z C;  3GTQ K;  4A3C C;  3HOY K;  3GTJ C;  2B63 K;  3GTM K;  2E2H C;  4A3B C;  3HOZ K;  4Y7N C;  3H3V D;  1TWH C;  4BBS K;  1I3Q C;  4C2M K;  4YFK A;  2R92 K;  3S14 K;  3I4M K;  4XLP A;  5IYB C;  4OIP A;  5C44 C;  3GTG K;  5FLM K;  4A3B K;  1R9T K;  5C4X C;  1I3Q K;  3M4O K;  5M5X K;  3GTP K;  4NOI A;  4A3M C;  1ZYR A;  4YFX A;  4BY1 K;  1SFO C;  5TMF A;  2Y0S D;  3CQZ C;  4A93 C;  4A3K K;  1WCM C;  4BY7 C;  3S1R K;  2VUM K;  3S2H K;  4YG2 A;  4A3F C;  4XSX A;  4LK0 A;  3S1N K;  5IYC K;  3S15 C;  2PMZ L;  3GTQ C;  3HOY C;  3RZO K;  2B63 C;  3GTL K;  1SFO K;  2CW0 A;  4YFN A;  4OIN A;  4BBR K;  1SMY A;  4AYB D;  5C3E K;  4BBS C;  1WCM K;  2E2J K;  3GTO K;  3S17 K;  4C2M C;  4OIR A;  4A3D C;  3FKI K;  3S14 C;  1TWF K;  3S1M K;  3GTG C;  2YU9 K;  5FLM C;  5M3F K;  4KN7 A;  1R9T C;  4GZY A;  3M4O C;  2R7Z K;  3HKZ D;  2R93 K;  4C3I K;  3GTP C;  2JA8 K;  3M3Y K;  4A3D K;  3HOW K;  4BY1 C;  4G7O A;  2VUM C;  3S2H C;  5C4J K;  3S1R C;  4KN4 A;  3DXJ A;  4QJV A;  3S1N C;  5IYC C;  3RZO C;  2E2I K;  5IP9 K;  1I6H C;  2PA8 D;  2NVQ K;  3I4N C;  5M5W K;  2JA6 K;  5D4D A;  3GTL C;  2WAQ L;  5C3E C;  4BBR C;  3H0G K;  1TWA K;  3S16 K;  3GTO C;  2E2J C;  3S17 C;  1I50 K;  3FKI C;  4BXX K;  4OIQ A;  4MEY A;  1TWF C;  1I6H K;  3S1M C;  5IP7 C;  3I4N K;  2YU9 C;  2NVT C;  5M5Y K;  3HOV K;  1Y1V K;  2WB1 L;  4LK1 A;  1I6V A;  2R93 C;  4ZH4 A;  4C3I C;  4G7H A;  2JA8 C;  3M3Y C;  1BDF A;  1Y1W C;  5FJ8 K;  2A6H A;  3HOX K;  3HOW C;  3GTK K;  4KMU A;  3S2D K;  5IP7 K;  2NVT K;  5C4J C;  4JK1 A;  2A69 A;  2BE5 A;  1TWG K;  4A3E K;  1TWC K;  4LJZ A;  4QIW L;  2NVQ C;  2E2I C;  4MQ9 A;  5IP9 C;  1Y1W K;  1K83 K;  3PO3 K;  1IW7 A;  2NVY K;  2JA6 C;  2PMZ D;  3H0G C;  3S16 C;  1TWA C;  4A3L C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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