5TMC | Genus

Total Genus 39

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	39
sequence length	231
structure length	231
Chain Sequence	MLDSKLKAPVFTVRTQGREYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYIEDVLHEFSTIPGVKEDVVEIILNLKELVVRFLNPSLQTVTLLLKAEGPKEVKARDFLPVADVEIMNPDLHIATLEEGGRLNMEVRVDRGVGYVPAEKHGIKDRINAIPVDAVFSPVRRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHLTYFSNPQAA

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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reading 231 atoms

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231 atoms created

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Transferase
publication title	On the validation of crystallographic symmetry and the quality of structures. pubmed doi rcsb
molecule keywords	DNA-directed RNA polymerase subunit alpha
total genus	39
structure length	231
sequence length	231
chains with identical sequence	B
ec nomenclature	ec 2.7.7.6: DNA-directed RNA polymerase.
pdb deposition date	2016-10-12

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF01000	RNA_pol_A_bac	RNA polymerase Rpb3/RpoA insert domain
A	PF01193	RNA_pol_L	RNA polymerase Rpb3/Rpb11 dimerisation domain
A	PF03118	RNA_pol_A_CTD	Bacterial RNA polymerase, alpha chain C terminal domain

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.170.120.12	Mainly Beta	Beta Complex	RNA Polymerase Alpha Subunit; Chain A, domain 2	DNA-directed RNA polymerase, insert domain	5tmcA02
3.30.1360.10	Alpha Beta	2-Layer Sandwich	Gyrase A; domain 2	RNA polymerase, RBP11-like subunit	5tmcA01

5FLMK 4AYBD 2NVXC 1K83K 2PA8L 3HOWK 1Y1WC 4A3BK 4A3DC 5M5XK 2R93K 5TMFA 3S17C 3GTJC 2E2JC 1TWFK 4YFXA 4NOIA 4A3GK 1ZYRA 3FKIK 2VUMK 4A3FC 4LK1A 2NVXK 4C2MC 5D4DA 3I4NC 1Y1WK 4A3DK 4BY7C 1I6HC 1TWAC 3GTPC 2O5JA 2JA6C 3S17K 1I50C 3H3VL 4KN4A 2BE5A 3GTJK 1TWHC 3HKZD 2E2JK 2E2HC 4A3FK 2WAQL 4C2MK 3I4NK 2A6HA 4MEXA 4Q5SA 1YNJA 4BY7K 4KMUA 2WB1D 1TWAK 3GTPK 1I6HK 3I4MC 5IP9C 2JA6K 1I50K 4BY1C 1TWHK 3S16C 5M5YK 2E2HK 1HQMA 3CQZC 1I6VA 4A3KC 4KN7A 3WODA 5C44C 3S2DC 3H0GC 4XLNA 2B63C 1Y1VC 2A68A 1YNNA 5C3EC 4OIPA 2PMZL 5IP9K 1XPPA 3I4MK 3HOZC 4BY1K 3HOUC 4YFNA 2Y0SL 4A3EC 3S16K 3HOYC 4QIWL 3M3YC 3CQZK 4A3KK 3S15C 5C44K 3S2DK 3H0GK 4G7OA 1Y1VK 2B63K 2A6EA 4A3MC 1SFOC 5C3EK 3GTOC 3HOZK 4C3JC 2A69A 3HOUK 4Q4ZA 1TWGC 2E2IC 4A3EK 3HOYK 5C4XC 3M3YK 3GTKC 1WCMC 5M3MK 3S15K 3H3VD 1R9TC 4A3MK 3S1QC 1SFOK 3S14C 3GTOK 4XSZA 3S2HC 1IW7A 2O5IA 4C3JK 1TWGK 3PO2C 2E2IK 4A93C 3GTLC 4ZH4A 4BXXC 2WAQD 5C4XK 2NVTC 3GTKK 1WCMK 2JA5C 1R9TK 3S1QK 5IYBC 3PO3C 3S14K 3DXJA 3S2HK 4C3IC 3PO2K 4A93K 2YU9C 4G7ZA 3GTLK 2PA8D 4G7HA 4A3JC 4BXXK 5M5WK 3K7AC 5IYCC 2NVTK 4BBSC 2PMZD 4AYBL 2JA5K 2Y0SD 4XSXA 5IYBK 2CW0A 3PO3K 4OIQA 4C3IK 4QIWD 2YU9K 1TWCC 4A3JK 4XLPA 2PPBA 3HOVC 3GTGC 3K7AK 5IYCK 5IYDC 4BBSK 4BBRC 5C4JC 4A3CC 5TMCA 3GTMC 4OINA 3S1RC 4Y7NC 1BDFA 2NVQC 3S1MC 2R93C 4YFKA 3S1NC 3HOXC 4A3IC 4QJVB 1SMYA 2R92C 1TWCK 3HKZL 2JA8C 4OIOA 3EQLA 5IP7C 3M4OC 4A3LC 3GTGK 3HOVK 5IYDK 4BBRK 5C4JK 4A3CK 3GTMK 3S1RK 4Y7NK 2NVYC 4QJVA 4C3HC 3GTQC 4X6AC 5M3FK 2NVQK 3S1MK 3HOXK 3RZOC 2WB1L 4A3IK 3S1NK 4LLGA 4OIRA 2JA7C 3RZDC 2R92K 4MQ9A 2R7ZC 4Y52C 2JA8K 4JK1A 1I3QC 5IP7K 3M4OK 4A3LK 5FLMC 1K83C 3HOWC 4A3BC 5FJ8K 2NVYK 4C3HK 3GTQK 4X6AK 4MEYA 4YG2A 3RZOK 4GZYA 4LK0A 1TWFC 4A3GC 2JA7K 4LJZA 3RZDK 2R7ZK 3FKIC 4Y52K 2VUMC 1I3QK
chains in the Genus database with same CATH superfamily

1K83K 4GTFA 1Y1WC 4PABA 4A3DC 2CFAA 3GTJC 4A3GK 2O5JA 3S17K 1I50C 2WAQL 4C2MK 4MEXA 4Q5SA 1YNJA 1IS1A 4KMUA 1O28A 3GTPK 4BY7K 1JOEA 2JA6K 5IP9C 3S16C 3GEIA 3CQZC 4XLNA 5C3EC 4OIPA 4YFNA 1XXBA 1F9NA 1WIHA 4WCES 3H0GK 2B63K 3GEEA 5JVOA 3HOUK 2A69A 4Q4ZA 3N3YA 2GAHC 1TWAA 1WOOA 3M3YK 2JA7A 4LOWA 1PJ7A 1R9TC 3L4JA 4XCHA 1TWGK 3AD7C 5C4XK 5EGEA 3GTKK 5IOQA 1WQHA 4BLAA 1VLOA 4G7ZA 4U67S 4BXXK 5M5WK 3K7AC 3QX3A 2NVTK 2W7VA 4RMFA 3VA7A 2Y0SD 4XSXA 3PO3K 2CW0A 1AB4A 1WORA 4C3IK 4QIWD 3GTPA 1TWCC 4A3JK 3AQOA 1SFOA 3S0XA 3GTOA 3SZYA 5C4JC 5TJ3A 1BDFA 2GSUA 2R93C 3GDZA 4BKWA 3S1NC 3HOXC 1SMYA 1WCMA 1J6WA 4BBRK 5IOSA 3T00A 5L46A 1F7UA 3GTLA 2NVYC 2KQ1A 2NVQK 3S1MK 3RZOC 4LLGA 1JVIA 2JA7C 3RZDC 2R7ZC 1WOSA 2JA5A 5IP7K 1ZVUA 1K83C 3TTGA 4C3HK 4X6AK 4AH6A 4A3GC 4LJZA 2L5NA 3HOWK 1TWGA 3A8JA 2PA8L 4BLBA 1EI6A 4WFAS 3S17C 2P8TA 4YFXA 4NOIA 4LR2A 3GTMA 1ZYRA 3BP8C 4LK1A 2NVXK 4C2MC 1JQWA 4BY7C 2FQOA 3GTPC 2KWAA 4WILA 2JA6C 2EBBA 2E2JK 1C0AA 1VGXA 1XZQB 2P5MA 2RH6A 3AD9C 1TWAK 4GTEA 2XCQA 4KATA 1VJEA 1WOPA 1XZQA 2V6TA 2E2HK 1O26A 5IORA 3WODA 4GTAA 3H0GC 4J3NA 2B63C 1O2AA 4GT9A 3I4MK 3HOUC 3IPJA 2Y0SL 4QIWL 3M3YC 1J6XA 3S2DK 4G7OA 4P5BA 1VRQC 4KM9A 1TWGC 3NUHA 4A3EK 2KXYA 3TFHA 3OREA 3HOYK 3OEPA 5C4XC 5E68A 3GTKC 3S15K 1TWHA 1DD5A 2JH3A 4A3MK 1DCHA 1SFOK 3GTOK 1IBAA 4C3JK 2Y3PA 4ZH4A 4BXXC 4WJ3M 2NVTC 1WCMK 1XZPA 4DDQA 3PO3C 2NVXA 3DLLS 3S2HK 2ZJRS 3G4CA 4C3IC 1Y1VA 2PA8D 4A3JC 3ERED 3GTLK 1O24A 5IOTA 5HL7S 3LAJA 2PMZD 4KMAA 2JA5K 5IYBK 1XXAA 2FQTA 5EGHA 2GAGC 3V4GA 4IO9S 2PPBA 1HI9A 4BBSK 4BBRC 5TMCA 2E2IA 4OINA 2NVQC 3S1MC 2E2HA 3ADAC 4G0WA 2ZJQS 4KARA 4OIOA 3EQLA 5IP7C 1PJ5A 1IL2A 3GTGK 4KAWX 3GTMK 4Y7NK 5M3FK 4C3HC 4X6AC 1GE9A 4A3IK 1BS2A 1WQGA 4KASA 3M4OK 4A3LK 3HOWC 4KB2A 2YU9A 4MEYA 4KMHA 4KDDA 3Q3QA 3LAPA 4WJ4A 4Y52K 5FLMK 2NVXC 4A3BK 5HL8A 4WFBS 1V5VA 1O29A 3JSTA 2E2JC 1VH2A 2VUMK 3AH5A 1TWAC 1F93A 4KN4A 5HQHA 1FEUA 4M1XA 1WQFA 3GTQA 2E2HC 4A3FK 3A8KA 3I4NK 1I6HK 3I4MC 1EK8A 4GTLA 1WSVA 1BJTA 1TWHK 2ZFZA 3GSIA 3OPFA 1HQMA 3S2DC 4GTCA 1YNNA 4GFQA 2V6UA 2PMZL 2ZUFA 5DM6S 1EH1A 1XPPA 4BY1K 3GTGA 4A3EC 1Y1WA 1YCLA 4C45A 3HOYC 4A3KK 3S15C 5C44K 4O2DA 3GTJA 4G0VA 1Y1VK 4A3MC 1SFOC 3GTOC 3HOZK 4C3JC 1O2BA 3G4AA 1IE0A 1UV7A 1I50A 1WCMC 4WF9S 5M3MK 1J98A 1WSRA 3H3VD 2ZJPS 3S2HC 1IW7A 2E2IK 3GTLC 2V6SA 2VUMA 2JA5C 3S1QK 5IYBC 3CQZA 3S14K 3DXJA 1O27A 1PJ6A 1EFWA 3PO2K 1O2FB 1X31C 4A93K 3GEHA 4BBSC 1KQ4A 4P9SA 4FZBA 5JVHS 2KPUA 4OIQA 1DCOA 2YU9K 4LQYA 3PIOS 3GTGC 5IYCK 3GTMC 1XZPB 4Y7NC 3A8IA 3T02A 1ISEA 1F7VA 4A3IC 1R9TA 3M4OC 4A3LC 3HOVK 5IYDK 4A3CK 3S1RK 4FM9A 2L3UA 2R92K 3TFJA 4Y52C 2JA8K 4JK1A 5JVGS 5FLMC 2XCRB 4A3BC 3GTQK 5DM7S 4YG2A 3BUEA 2D6FC 2VUMC 1I3QK 3FOFA 4AYBD 1RU0A 4IOCS 5M5XK 1TWCA 5TMFA 3AD8C 1TWFK 3FKIK 2R93A 4A3FC 1EQRA 1ZXOA 5D4DA 3I4NC 1DCPA 1Y1WK 4A3DK 1I6HC 1L0WA 1G51A 3H3VL 2BE5A 3GTJK 1TWHC 3HKZD 4KMDA 2NVYA 3HXAA 4G0UA 1O25A 4KB4A 2XCOA 5JFEA 2A6HA 1ZBSA 2PHCB 2WB1D 1BGWA 1USMA 2R7ZA 3FOEA 4ILDA 1I50K 4BY1C 5CHPA 4KC6A 1K83A 5M5YK 1ZQ1C 4GTDA 1B4BA 1I6VA 4PAAA 4A3KC 4KN7A 5C44C 3AQPA 1Y1VC 2A68A 3CF5S 5IP9K 3HOZC 3TFIA 3S16K 3MMLB 3CQZK 3N0BA 3SZZA 2R92A 1J6VA 2A6EA 5C3EK 2GSNA 2E2IC 3L4KA 4KM8A 2JA6A 4P5AA 2RGRA 3S1QC 1I3QA 3S14C 4XSZA 1INNA 2O5IA 3PO2C 4A93C 4IOAS 4GTBA 2WAQD 1TWFA 3FHZA 3FKIA 1YX2A 1R9TK 3H0GA 2YU9C 2B63A 4G7HA 3T01A 5IYCC 4AYBL 3GIRA 4XLPA 3HOVC 3K7AK 1IQ0A 5IYDC 4A3CC 3S1RC 2ZUEA 3LYWA 4YFKA 4QJVB 3GTKA 5CJ9A 3LPXA 2R92C 1TWCK 3PIPS 3HKZL 2JA8C 2GSOA 5C4JK 3CAGA 4QJVA 3GTQC 2R93K 4WFNS 3S1NK 3HOXK 2WB1L 3N0CA 4OIRA 1USOA 4MQ9A 1I3QC 3BP3A 5FJ8K 2NVYK 3RZOK 4GZYA 1B4AA 4LK0A 1TWFC 2JA7K 2CFAB 1XXCA 3RZDK 2R7ZK 3FKIC
chains in the Genus database with same CATH topology

#chains in the Genus database with same CATH superfamily
 5FLM K;  4AYB D;  2NVX C;  1K83 K;  2PA8 L;  3HOW K;  1Y1W C;  4A3B K;  4A3D C;  5M5X K;  2R93 K;  5TMF A;  3S17 C;  3GTJ C;  2E2J C;  1TWF K;  4YFX A;  4NOI A;  4A3G K;  1ZYR A;  3FKI K;  2VUM K;  4A3F C;  4LK1 A;  2NVX K;  4C2M C;  5D4D A;  3I4N C;  1Y1W K;  4A3D K;  4BY7 C;  1I6H C;  1TWA C;  3GTP C;  2O5J A;  2JA6 C;  3S17 K;  1I50 C;  3H3V L;  4KN4 A;  2BE5 A;  3GTJ K;  1TWH C;  3HKZ D;  2E2J K;  2E2H C;  4A3F K;  2WAQ L;  4C2M K;  3I4N K;  2A6H A;  4MEX A;  4Q5S A;  1YNJ A;  4BY7 K;  4KMU A;  2WB1 D;  1TWA K;  3GTP K;  1I6H K;  3I4M C;  5IP9 C;  2JA6 K;  1I50 K;  4BY1 C;  1TWH K;  3S16 C;  5M5Y K;  2E2H K;  1HQM A;  3CQZ C;  1I6V A;  4A3K C;  4KN7 A;  3WOD A;  5C44 C;  3S2D C;  3H0G C;  4XLN A;  2B63 C;  1Y1V C;  2A68 A;  1YNN A;  5C3E C;  4OIP A;  2PMZ L;  5IP9 K;  1XPP A;  3I4M K;  3HOZ C;  4BY1 K;  3HOU C;  4YFN A;  2Y0S L;  4A3E C;  3S16 K;  3HOY C;  4QIW L;  3M3Y C;  3CQZ K;  4A3K K;  3S15 C;  5C44 K;  3S2D K;  3H0G K;  4G7O A;  1Y1V K;  2B63 K;  2A6E A;  4A3M C;  1SFO C;  5C3E K;  3GTO C;  3HOZ K;  4C3J C;  2A69 A;  3HOU K;  4Q4Z A;  1TWG C;  2E2I C;  4A3E K;  3HOY K;  5C4X C;  3M3Y K;  3GTK C;  1WCM C;  5M3M K;  3S15 K;  3H3V D;  1R9T C;  4A3M K;  3S1Q C;  1SFO K;  3S14 C;  3GTO K;  4XSZ A;  3S2H C;  1IW7 A;  2O5I A;  4C3J K;  1TWG K;  3PO2 C;  2E2I K;  4A93 C;  3GTL C;  4ZH4 A;  4BXX C;  2WAQ D;  5C4X K;  2NVT C;  3GTK K;  1WCM K;  2JA5 C;  1R9T K;  3S1Q K;  5IYB C;  3PO3 C;  3S14 K;  3DXJ A;  3S2H K;  4C3I C;  3PO2 K;  4A93 K;  2YU9 C;  4G7Z A;  3GTL K;  2PA8 D;  4G7H A;  4A3J C;  4BXX K;  5M5W K;  3K7A C;  5IYC C;  2NVT K;  4BBS C;  2PMZ D;  4AYB L;  2JA5 K;  2Y0S D;  4XSX A;  5IYB K;  2CW0 A;  3PO3 K;  4OIQ A;  4C3I K;  4QIW D;  2YU9 K;  1TWC C;  4A3J K;  4XLP A;  2PPB A;  3HOV C;  3GTG C;  3K7A K;  5IYC K;  5IYD C;  4BBS K;  4BBR C;  5C4J C;  4A3C C;  5TMC A;  3GTM C;  4OIN A;  3S1R C;  4Y7N C;  1BDF A;  2NVQ C;  3S1M C;  2R93 C;  4YFK A;  3S1N C;  3HOX C;  4A3I C;  4QJV B;  1SMY A;  2R92 C;  1TWC K;  3HKZ L;  2JA8 C;  4OIO A;  3EQL A;  5IP7 C;  3M4O C;  4A3L C;  3GTG K;  3HOV K;  5IYD K;  4BBR K;  5C4J K;  4A3C K;  3GTM K;  3S1R K;  4Y7N K;  2NVY C;  4QJV A;  4C3H C;  3GTQ C;  4X6A C;  5M3F K;  2NVQ K;  3S1M K;  3HOX K;  3RZO C;  2WB1 L;  4A3I K;  3S1N K;  4LLG A;  4OIR A;  2JA7 C;  3RZD C;  2R92 K;  4MQ9 A;  2R7Z C;  4Y52 C;  2JA8 K;  4JK1 A;  1I3Q C;  5IP7 K;  3M4O K;  4A3L K;  5FLM C;  1K83 C;  3HOW C;  4A3B C;  5FJ8 K;  2NVY K;  4C3H K;  3GTQ K;  4X6A K;  4MEY A;  4YG2 A;  3RZO K;  4GZY A;  4LK0 A;  1TWF C;  4A3G C;  2JA7 K;  4LJZ A;  3RZD K;  2R7Z K;  3FKI C;  4Y52 K;  2VUM C;  1I3Q K; 
#chains in the Genus database with same CATH topology
 1K83 K;  4GTF A;  1Y1W C;  4PAB A;  4A3D C;  2CFA A;  3GTJ C;  4A3G K;  2O5J A;  3S17 K;  1I50 C;  2WAQ L;  4C2M K;  4MEX A;  4Q5S A;  1YNJ A;  1IS1 A;  4KMU A;  1O28 A;  3GTP K;  4BY7 K;  1JOE A;  2JA6 K;  5IP9 C;  3S16 C;  3GEI A;  3CQZ C;  4XLN A;  5C3E C;  4OIP A;  4YFN A;  1XXB A;  1F9N A;  1WIH A;  4WCE S;  3H0G K;  2B63 K;  3GEE A;  5JVO A;  3HOU K;  2A69 A;  4Q4Z A;  3N3Y A;  2GAH C;  1TWA A;  1WOO A;  3M3Y K;  2JA7 A;  4LOW A;  1PJ7 A;  1R9T C;  3L4J A;  4XCH A;  1TWG K;  3AD7 C;  5C4X K;  5EGE A;  3GTK K;  5IOQ A;  1WQH A;  4BLA A;  1VLO A;  4G7Z A;  4U67 S;  4BXX K;  5M5W K;  3K7A C;  3QX3 A;  2NVT K;  2W7V A;  4RMF A;  3VA7 A;  2Y0S D;  4XSX A;  3PO3 K;  2CW0 A;  1AB4 A;  1WOR A;  4C3I K;  4QIW D;  3GTP A;  1TWC C;  4A3J K;  3AQO A;  1SFO A;  3S0X A;  3GTO A;  3SZY A;  5C4J C;  5TJ3 A;  1BDF A;  2GSU A;  2R93 C;  3GDZ A;  4BKW A;  3S1N C;  3HOX C;  1SMY A;  1WCM A;  1J6W A;  4BBR K;  5IOS A;  3T00 A;  5L46 A;  1F7U A;  3GTL A;  2NVY C;  2KQ1 A;  2NVQ K;  3S1M K;  3RZO C;  4LLG A;  1JVI A;  2JA7 C;  3RZD C;  2R7Z C;  1WOS A;  2JA5 A;  5IP7 K;  1ZVU A;  1K83 C;  3TTG A;  4C3H K;  4X6A K;  4AH6 A;  4A3G C;  4LJZ A;  2L5N A;  3HOW K;  1TWG A;  3A8J A;  2PA8 L;  4BLB A;  1EI6 A;  4WFA S;  3S17 C;  2P8T A;  4YFX A;  4NOI A;  4LR2 A;  3GTM A;  1ZYR A;  3BP8 C;  4LK1 A;  2NVX K;  4C2M C;  1JQW A;  4BY7 C;  2FQO A;  3GTP C;  2KWA A;  4WIL A;  2JA6 C;  2EBB A;  2E2J K;  1C0A A;  1VGX A;  1XZQ B;  2P5M A;  2RH6 A;  3AD9 C;  1TWA K;  4GTE A;  2XCQ A;  4KAT A;  1VJE A;  1WOP A;  1XZQ A;  2V6T A;  2E2H K;  1O26 A;  5IOR A;  3WOD A;  4GTA A;  3H0G C;  4J3N A;  2B63 C;  1O2A A;  4GT9 A;  3I4M K;  3HOU C;  3IPJ A;  2Y0S L;  4QIW L;  3M3Y C;  1J6X A;  3S2D K;  4G7O A;  4P5B A;  1VRQ C;  4KM9 A;  1TWG C;  3NUH A;  4A3E K;  2KXY A;  3TFH A;  3ORE A;  3HOY K;  3OEP A;  5C4X C;  5E68 A;  3GTK C;  3S15 K;  1TWH A;  1DD5 A;  2JH3 A;  4A3M K;  1DCH A;  1SFO K;  3GTO K;  1IBA A;  4C3J K;  2Y3P A;  4ZH4 A;  4BXX C;  4WJ3 M;  2NVT C;  1WCM K;  1XZP A;  4DDQ A;  3PO3 C;  2NVX A;  3DLL S;  3S2H K;  2ZJR S;  3G4C A;  4C3I C;  1Y1V A;  2PA8 D;  4A3J C;  3ERE D;  3GTL K;  1O24 A;  5IOT A;  5HL7 S;  3LAJ A;  2PMZ D;  4KMA A;  2JA5 K;  5IYB K;  1XXA A;  2FQT A;  5EGH A;  2GAG C;  3V4G A;  4IO9 S;  2PPB A;  1HI9 A;  4BBS K;  4BBR C;  5TMC A;  2E2I A;  4OIN A;  2NVQ C;  3S1M C;  2E2H A;  3ADA C;  4G0W A;  2ZJQ S;  4KAR A;  4OIO A;  3EQL A;  5IP7 C;  1PJ5 A;  1IL2 A;  3GTG K;  4KAW X;  3GTM K;  4Y7N K;  5M3F K;  4C3H C;  4X6A C;  1GE9 A;  4A3I K;  1BS2 A;  1WQG A;  4KAS A;  3M4O K;  4A3L K;  3HOW C;  4KB2 A;  2YU9 A;  4MEY A;  4KMH A;  4KDD A;  3Q3Q A;  3LAP A;  4WJ4 A;  4Y52 K;  5FLM K;  2NVX C;  4A3B K;  5HL8 A;  4WFB S;  1V5V A;  1O29 A;  3JST A;  2E2J C;  1VH2 A;  2VUM K;  3AH5 A;  1TWA C;  1F93 A;  4KN4 A;  5HQH A;  1FEU A;  4M1X A;  1WQF A;  3GTQ A;  2E2H C;  4A3F K;  3A8K A;  3I4N K;  1I6H K;  3I4M C;  1EK8 A;  4GTL A;  1WSV A;  1BJT A;  1TWH K;  2ZFZ A;  3GSI A;  3OPF A;  1HQM A;  3S2D C;  4GTC A;  1YNN A;  4GFQ A;  2V6U A;  2PMZ L;  2ZUF A;  5DM6 S;  1EH1 A;  1XPP A;  4BY1 K;  3GTG A;  4A3E C;  1Y1W A;  1YCL A;  4C45 A;  3HOY C;  4A3K K;  3S15 C;  5C44 K;  4O2D A;  3GTJ A;  4G0V A;  1Y1V K;  4A3M C;  1SFO C;  3GTO C;  3HOZ K;  4C3J C;  1O2B A;  3G4A A;  1IE0 A;  1UV7 A;  1I50 A;  1WCM C;  4WF9 S;  5M3M K;  1J98 A;  1WSR A;  3H3V D;  2ZJP S;  3S2H C;  1IW7 A;  2E2I K;  3GTL C;  2V6S A;  2VUM A;  2JA5 C;  3S1Q K;  5IYB C;  3CQZ A;  3S14 K;  3DXJ A;  1O27 A;  1PJ6 A;  1EFW A;  3PO2 K;  1O2F B;  1X31 C;  4A93 K;  3GEH A;  4BBS C;  1KQ4 A;  4P9S A;  4FZB A;  5JVH S;  2KPU A;  4OIQ A;  1DCO A;  2YU9 K;  4LQY A;  3PIO S;  3GTG C;  5IYC K;  3GTM C;  1XZP B;  4Y7N C;  3A8I A;  3T02 A;  1ISE A;  1F7V A;  4A3I C;  1R9T A;  3M4O C;  4A3L C;  3HOV K;  5IYD K;  4A3C K;  3S1R K;  4FM9 A;  2L3U A;  2R92 K;  3TFJ A;  4Y52 C;  2JA8 K;  4JK1 A;  5JVG S;  5FLM C;  2XCR B;  4A3B C;  3GTQ K;  5DM7 S;  4YG2 A;  3BUE A;  2D6F C;  2VUM C;  1I3Q K;  3FOF A;  4AYB D;  1RU0 A;  4IOC S;  5M5X K;  1TWC A;  5TMF A;  3AD8 C;  1TWF K;  3FKI K;  2R93 A;  4A3F C;  1EQR A;  1ZXO A;  5D4D A;  3I4N C;  1DCP A;  1Y1W K;  4A3D K;  1I6H C;  1L0W A;  1G51 A;  3H3V L;  2BE5 A;  3GTJ K;  1TWH C;  3HKZ D;  4KMD A;  2NVY A;  3HXA A;  4G0U A;  1O25 A;  4KB4 A;  2XCO A;  5JFE A;  2A6H A;  1ZBS A;  2PHC B;  2WB1 D;  1BGW A;  1USM A;  2R7Z A;  3FOE A;  4ILD A;  1I50 K;  4BY1 C;  5CHP A;  4KC6 A;  1K83 A;  5M5Y K;  1ZQ1 C;  4GTD A;  1B4B A;  1I6V A;  4PAA A;  4A3K C;  4KN7 A;  5C44 C;  3AQP A;  1Y1V C;  2A68 A;  3CF5 S;  5IP9 K;  3HOZ C;  3TFI A;  3S16 K;  3MML B;  3CQZ K;  3N0B A;  3SZZ A;  2R92 A;  1J6V A;  2A6E A;  5C3E K;  2GSN A;  2E2I C;  3L4K A;  4KM8 A;  2JA6 A;  4P5A A;  2RGR A;  3S1Q C;  1I3Q A;  3S14 C;  4XSZ A;  1INN A;  2O5I A;  3PO2 C;  4A93 C;  4IOA S;  4GTB A;  2WAQ D;  1TWF A;  3FHZ A;  3FKI A;  1YX2 A;  1R9T K;  3H0G A;  2YU9 C;  2B63 A;  4G7H A;  3T01 A;  5IYC C;  4AYB L;  3GIR A;  4XLP A;  3HOV C;  3K7A K;  1IQ0 A;  5IYD C;  4A3C C;  3S1R C;  2ZUE A;  3LYW A;  4YFK A;  4QJV B;  3GTK A;  5CJ9 A;  3LPX A;  2R92 C;  1TWC K;  3PIP S;  3HKZ L;  2JA8 C;  2GSO A;  5C4J K;  3CAG A;  4QJV A;  3GTQ C;  2R93 K;  4WFN S;  3S1N K;  3HOX K;  2WB1 L;  3N0C A;  4OIR A;  1USO A;  4MQ9 A;  1I3Q C;  3BP3 A;  5FJ8 K;  2NVY K;  3RZO K;  4GZY A;  1B4A A;  4LK0 A;  1TWF C;  2JA7 K;  2CFA B;  1XXC A;  3RZD K;  2R7Z K;  3FKI C; 
#chains in the Genus database with same CATH homology
 5FLM K;  4AYB D;  2NVX C;  1K83 K;  2PA8 L;  3HOW K;  1Y1W C;  4A3B K;  4A3D C;  5M5X K;  2R93 K;  5TMF A;  3S17 C;  3GTJ C;  2E2J C;  1TWF K;  4YFX A;  4NOI A;  4A3G K;  1ZYR A;  3FKI K;  2VUM K;  4A3F C;  4LK1 A;  2NVX K;  4C2M C;  5D4D A;  3I4N C;  1Y1W K;  4A3D K;  4BY7 C;  1I6H C;  1TWA C;  3GTP C;  2O5J A;  2JA6 C;  3S17 K;  1I50 C;  3H3V L;  4KN4 A;  2BE5 A;  3GTJ K;  1TWH C;  3HKZ D;  2E2J K;  2E2H C;  4A3F K;  2WAQ L;  4C2M K;  3I4N K;  2A6H A;  4MEX A;  4Q5S A;  1YNJ A;  4BY7 K;  4KMU A;  2WB1 D;  1TWA K;  3GTP K;  1I6H K;  3I4M C;  5IP9 C;  2JA6 K;  1I50 K;  4BY1 C;  1TWH K;  3S16 C;  5M5Y K;  2E2H K;  1HQM A;  3CQZ C;  1I6V A;  4A3K C;  4KN7 A;  3WOD A;  5C44 C;  3S2D C;  3H0G C;  4XLN A;  2B63 C;  1Y1V C;  2A68 A;  1YNN A;  5C3E C;  4OIP A;  2PMZ L;  5IP9 K;  1XPP A;  3I4M K;  3HOZ C;  4BY1 K;  3HOU C;  4YFN A;  2Y0S L;  4A3E C;  3S16 K;  3HOY C;  4QIW L;  3M3Y C;  3CQZ K;  4A3K K;  3S15 C;  5C44 K;  3S2D K;  3H0G K;  4G7O A;  1Y1V K;  2B63 K;  2A6E A;  4A3M C;  1SFO C;  5C3E K;  3GTO C;  3HOZ K;  4C3J C;  2A69 A;  3HOU K;  4Q4Z A;  1TWG C;  2E2I C;  4A3E K;  3HOY K;  5C4X C;  3M3Y K;  3GTK C;  1WCM C;  5M3M K;  3S15 K;  3H3V D;  1R9T C;  4A3M K;  3S1Q C;  1SFO K;  3S14 C;  3GTO K;  4XSZ A;  3S2H C;  1IW7 A;  2O5I A;  4C3J K;  1TWG K;  3PO2 C;  2E2I K;  4A93 C;  3GTL C;  4ZH4 A;  4BXX C;  2WAQ D;  5C4X K;  2NVT C;  3GTK K;  1WCM K;  2JA5 C;  1R9T K;  3S1Q K;  5IYB C;  3PO3 C;  3S14 K;  3DXJ A;  3S2H K;  4C3I C;  3PO2 K;  4A93 K;  2YU9 C;  4G7Z A;  3GTL K;  2PA8 D;  4G7H A;  4A3J C;  4BXX K;  5M5W K;  3K7A C;  5IYC C;  2NVT K;  4BBS C;  2PMZ D;  4AYB L;  2JA5 K;  2Y0S D;  4XSX A;  5IYB K;  2CW0 A;  3PO3 K;  4OIQ A;  4C3I K;  4QIW D;  2YU9 K;  1TWC C;  4A3J K;  4XLP A;  2PPB A;  3HOV C;  3GTG C;  3K7A K;  5IYC K;  5IYD C;  4BBS K;  4BBR C;  5C4J C;  4A3C C;  5TMC A;  3GTM C;  4OIN A;  3S1R C;  4Y7N C;  1BDF A;  2NVQ C;  3S1M C;  2R93 C;  4YFK A;  3S1N C;  3HOX C;  4A3I C;  4QJV B;  1SMY A;  2R92 C;  1TWC K;  3HKZ L;  2JA8 C;  4OIO A;  3EQL A;  5IP7 C;  3M4O C;  4A3L C;  3GTG K;  3HOV K;  5IYD K;  4BBR K;  5C4J K;  4A3C K;  3GTM K;  3S1R K;  4Y7N K;  2NVY C;  4QJV A;  4C3H C;  3GTQ C;  4X6A C;  5M3F K;  2NVQ K;  3S1M K;  3HOX K;  3RZO C;  2WB1 L;  4A3I K;  3S1N K;  4LLG A;  4OIR A;  2JA7 C;  3RZD C;  2R92 K;  4MQ9 A;  2R7Z C;  4Y52 C;  2JA8 K;  4JK1 A;  1I3Q C;  5IP7 K;  3M4O K;  4A3L K;  5FLM C;  1K83 C;  3HOW C;  4A3B C;  5FJ8 K;  2NVY K;  4C3H K;  3GTQ K;  4X6A K;  4MEY A;  4YG2 A;  3RZO K;  4GZY A;  4LK0 A;  1TWF C;  4A3G C;  2JA7 K;  4LJZ A;  3RZD K;  2R7Z K;  3FKI C;  4Y52 K;  2VUM C;  1I3Q K;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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5TMCA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations