5D4DA

Crystal structure of thermus thermophilus product complex for transcription initiation with nad and ctp
Total Genus 52
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
52
sequence length
229
structure length
229
Chain Sequence
SKLKAPVFTVRTQGREYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYIEDVLHEFSTIPGVKEDVVEIILNLKELVVRFLNPSLQTVTLLLKAEGPKEVKARDFLPVADVEIMNPDLHIATLEEGGRLNMEVRVDRGVGYVPAEKHGIKDRINAIPVDAVFSPVRRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHLTYFSNPQAAA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title The mechanism of RNA 5' capping with NAD(+), NADH and desphospho-CoA.
pubmed doi rcsb
molecule tags Transcription/dna
source organism Thermus thermophilus (strain hb27 / atcc baa-163 / dsm 7039)
molecule keywords DNA-directed RNA polymerase subunit alpha
total genus 52
structure length 229
sequence length 229
chains with identical sequence B, K, L
ec nomenclature ec 2.7.7.6: DNA-directed RNA polymerase.
pdb deposition date 2015-08-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
A PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
A PF03118 RNA_pol_A_CTD Bacterial RNA polymerase, alpha chain C terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 5d4dA02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 5d4dA01
3K7AC 3S1RC 3RZDC 4OIQA 2R7ZC 4Q5SA 3GTQC 4LLGA 5IP7K 1Y1WC 1I3QK 2NVXC 4KMUA 2E2HC 3WODA 5FJ8K 2JA5K 4A3LC 1I6HC 1TWFC 4YFNA 5C44C 5TMCA 5C4XK 1TWHC 4XSXA 4QIWL 4A3EK 4GZYA 4C3IK 4QJVA 4A3MC 3GTPK 4C3HC 5C3EK 2R92K 4A3KC 1Y1VC 2YU9K 2JA8C 3M4OC 2NVYC 4AYBL 5M5YK 4C2MC 5M5XK 2JA7C 2E2IK 3S1MC 1I50K 1SFOC 1TWCK 3RZOK 4QIWD 3I4MC 4C3JC 1WCMC 3S1QK 3HOVK 4A3FC 5C4JK 4A3CC 4BBRK 4A3GC 4G7ZA 1TWAK 5IYCC 4KN4A 4Y52C 3HOZC 5FLMK 2O5IA 2E2JC 2WB1L 1BDFA 4MEXA 3GTLK 4LK1A 3EQLA 5IYBC 3H3VD 4A3IC 3S16K 4JK1A 2JA6K 4OINA 2R93K 2NVTK 2O5JA 2WB1D 2Y0SL 3GTJK 1R9TK 2PA8L 2BE5A 4QJVB 4BY1K 3S14K 3S15K 4Y7NK 5IYDK 4MEYA 5IP7C 4Q4ZA 1I3QC 2WAQL 2JA5C 4LK0A 3FKIC 4YFXA 4XLNA 4X6AK 2Y0SD 1SMYA 3GTOC 2PA8D 5C4XC 3S1NK 3H0GK 3S17K 4A3EC 4BXXK 3M3YK 4C3IC 3S2DK 4A3DK 3GTPC 1TWGK 5M5WK 5C3EC 2WAQD 2R92C 1ZYRA 2YU9C 3PO2C 3H3VL 4XLPA 2E2IC 4G7HA 1I50C 1K83K 1TWCC 3RZOC 3HKZL 3GTGK 4ZH4A 3S1QC 3HOVC 3PO3C 2NVQC 5C4JC 4BBRC 2VUMC 4A93K 1Y1VK 3CQZK 4A3BK 3HOWK 2NVYK 5IP9K 1TWAC 3GTMK 3GTKK 5FLMC 3S2HK 1SFOK 3HKZD 4A3JK 4C3JK 1XPPA 2A68A 4A3FK 2B63K 4BBSK 1IW7A 5D4DA 3I4NK 3S16C 2A6HA 3M4OK 2JA6C 4MQ9A 3HOXK 3HOUK 3HOZK 4YFKA 2R93C 2NVTC 4BY7K 3HOYK 4OIOA 3GTJC 1R9TC 4BY1C 4XSZA 3S14C 3S15C 3K7AK 3S1RK 5IYDC 4Y7NC 3RZDK 2R7ZK 3GTQK 5TMFA 1Y1WK 1YNNA 1YNJA 2NVXK 2CW0A 4X6AC 2E2HK 4A3LK 3S1NC 3H0GC 3S17C 4KN7A 4BXXC 1TWFK 2PMZD 3M3YC 3S2DC 2A69A 4A3DC 1TWHK 5C44K 1TWGC 4A3MK 4C3HK 4A3KK 3FKIK 4OIRA 1I6VA 4LJZA 4NOIA 2JA8K 1K83C 4G7OA 2PPBA 4C2MK 2JA7K 3GTOK 3GTGC 3S1MK 1I6HK 3I4MK 3GTLC 1WCMK 2A6EA 4A93C 3CQZC 4A3BC 3HOWC 3PO2K 3DXJA 5IP9C 4A3CK 4A3GK 3GTMC 1HQMA 3GTKC 3S2HC 5IYCK 4Y52K 4A3JC 4YG2A 2E2JK 3PO3K 2B63C 4BBSC 2NVQK 3I4NC 5IYBK 2VUMK 2PMZL 4AYBD 3HOXC 4OIPA 3HOUC 4A3IK 5M3FK 5M3MK 4BY7C 3HOYC
chains in the Genus database with same CATH superfamily
2GSOA 1EK8A 1VRQC 3AH5A 4OIQA 3LYWA 2KWAA 5IP7K 1I3QK 1XZPA 5FJ8K 1TWGA 4KASA 1TWHC 4XSXA 4C3IK 5JVHS 1XXCA 2R92K 2YU9K 2JA8C 1WQFA 2JA7C 2E2IK 1SFOC 3RZOK 3L4JA 1WCMC 3G4AA 3HOVK 4A3CC 1EI6A 4A3GC 4Y52C 3HOZC 3AD8C 1XZQA 2WB1L 4MEXA 3GTLK 1IBAA 4WF9S 3H3VD 1XZPB 4OINA 2XCOA 2V6UA 3PIOS 1J98A 2O5JA 2WB1D 1L0WA 2PA8L 4FM9A 4Q4ZA 4G0VA 5IOSA 4AH6A 3FKIC 4YFXA 5JVGS 2PA8D 3HXAA 3S1NK 1Y1VA 3S2DK 1J6XA 2NVYA 4G7HA 1XZQB 1I50C 1K83K 1EFWA 3HKZL 3GTGK 3S1QC 2ZUFA 3PO3C 4KM8A 5DM6S 1ZXOA 5JVOA 4DDQA 1TWAC 3S2HK 5FLMC 4PAAA 3HKZD 2ZJRS 5IOTA 3AD7C 2RH6A 4A3FK 5D4DA 5E68A 3I4NK 1J6WA 4YFKA 2R93C 3GTJC 1R9TC 4XSZA 3S15C 3L4KA 3S1RK 1I3QA 1KQ4A 1JOEA 2R7ZK 3GTQK 1X31C 1Y1WK 1YNNA 2ZFZA 2NVXK 3GEEA 2KQ1A 4X6AC 2E2HK 3QX3A 1B4BA 5CJ9A 1TWFK 1C0AA 2R92A 2PMZD 4A3DC 2YU9A 3SZZA 1TWGC 2E2IA 4A3KK 4P5BA 4LJZA 3M4OK 3GTOK 4XCHA 1WOOA 4J3NA 1PJ5A 1WQHA 1JVIA 2A6EA 2PHCB 4A3BC 4KMDA 3HOWC 2GAHC 3DXJA 5IP9C 3PO2K 1O28A 3PIPS 1HQMA 3GTLA 5IYCK 4A3JC 2E2JK 1PJ6A 1IE0A 4AYBD 3HOXC 2JH3A 3K7AC 1G51A 5CHPA 4KATA 3GSIA 2JA5K 5HQHA 1O26A 5TMCA 3ERED 4QIWL 4GZYA 1WORA 1DD5A 3GTPK 1K83A 2ZJPS 5C3EK 1Y1VC 1O2BA 3GTGA 5M5YK 2NVYC 5M5XK 4GTDA 4QIWD 3I4MC 4C3JC 1IL2A 4BBRK 4G7ZA 4GTCA 2O5IA 1BDFA 3GEHA 3EQLA 5IYBC 3LPXA 4A3IC 3S16K 2RGRA 4WFBS 1WSRA 2JA6K 3TFIA 4WILA 2NVTK 2R7ZA 2V6SA 4BY1K 3GTQA 1Y1WA 4KAWX 2NVXA 4WFAS 4KM9A 2E2HA 5IP7C 1I3QC 2FQOA 1TWFA 4WCES 4GFQA 4KARA 3FHZA 1VH2A 3H0GK 3S17K 3LAPA 4WJ4A 4C3IC 2CFAA 5M5WK 3GTOA 2R92C 2FQTA 2YU9C 5EGHA 4XLPA 3H3VL 2E2IC 4WFNS 1ISEA 3MMLB 3RZOC 3HOVC 4RMFA 2NVQC 4IOCS 2VUMC 3Q3QA 3DLLS 1F7VA 4A93K 4GT9A 3ADAC 1IQ0A 1SFOK 1XXBA 4GTEA 2A68A 1WIHA 1UV7A 1IW7A 3GIRA 4C45A 4MQ9A 3HOUK 1WSVA 3HOZK 1YCLA 3HOYK 4OIOA 1YX2A 2CFAB 3CAGA 3RZDK 2JA5A 3BUEA 4KB4A 5DM7S 3N3YA 4PABA 5HL8A 4A3LK 3GTPA 3S1NC 1I6HK 5C44K 3S2DC 3G4CA 1WQGA 4A3MK 4G0UA 4WJ3M 4C3HK 3FKIK 1K83C 1VGXA 4LQYA 4C2MK 3S1MK 3GTGC 4KMAA 4G0WA 3GDZA 1PJ7A 3S2HC 4BLAA 1ZVUA 2JA6A 3PO3K 3I4NC 2PMZL 4OIPA 5M3FK 1VLOA 3AQPA 2L5NA 4O2DA 4M1XA 3TFHA 4BLBA 4LR2A 3S1RC 1USMA 3N0BA 2R7ZC 3GTQC 4LLGA 1Y1WC 2NVXC 3H0GA 2E2HC 3WODA 2ZUEA 2KXYA 1TWFC 4YFNA 3SZYA 5C4XK 4P9SA 4A3EK 4A3KC 3M4OC 1FEUA 4AYBL 1TWCK 2L3UA 2XCRB 1SFOA 5C4JK 5IYCC 4BKWA 2E2JC 1WOSA 1BJTA 1GE9A 4KB2A 2Y0SL 3S14K 2BE5A 4Y7NK 5IYDK 4MEYA 5JFEA 2WAQL 2JA5C 4LK0A 4XLNA 1EQRA 2Y0SD 1SMYA 4BXXK 3M3YK 3FKIA 4KDDA 3GTPC 5C3EC 2WAQD 3JSTA 4IO9S 4GTBA 1O25A 4ZH4A 3T02A 2GAGC 4BBRC 1Y1VK 3CQZK 2NVYK 4FZBA 4GTAA 3GTMK 3GTKK 4C3JK 1XPPA 2B63K 4BBSK 3S16C 2A6HA 2JA6C 2NVTC 1V5VA 4BY7K 4BY1C 1F93A 2D6FC 3OEPA 3IPJA 3S0XA 3NUHA 4P5AA 3CF5S 5TMFA 1YNJA 3H0GC 3S17C 3AQOA 2A69A 1TWHK 3TTGA 2GSNA 1TWCA 2JA8K 2GSUA 2PPBA 2JA7K 2V6TA 1BGWA 2ZJQS 2KPUA 3GTLC 1WCMK 4A93C 4A3CK 2Y3PA 4A3GK 4LOWA 4Y52K 1B4AA 4YG2A 3AD9C 4IOAS 2NVQK 2VUMK 2W7VA 3HOUC 3A8IA 5M3MK 5HL7S 1WOPA 3HOYC 1O2FB 3RZDC 4Q5SA 1JQWA 4KMUA 1HI9A 5L46A 4A3LC 1RU0A 1I6HC 5C44C 3BP8C 3T01A 1O29A 4QJVA 4A3MC 3LAJA 4C3HC 1VJEA 3T00A 4C2MC 3S1MC 1I50K 3CQZA 3S1QK 1INNA 4A3FC 3GTKA 3GTMA 3FOEA 1F9NA 4KN4A 1TWAK 1BS2A 2B63A 5FLMK 4LK1A 1AB4A 1EH1A 4JK1A 5EGEA 2R93K 3GTJK 1R9TK 4QJVB 3S15K 3OREA 3GEIA 3FOFA 1O24A 1TWHA 4X6AK 3GTOC 5C4XC 3TFJA 4A3EC 4A3DK 1TWGK 2JA7A 1ZYRA 1F7UA 5IORA 3PO2C 1ZBSA 1WCMA 1TWCC 1J6VA 2XCQA 1O2AA 2P8TA 5C4JC 4A3BK 3HOWK 5IP9K 3V4GA 3A8KA 4GTLA 2VUMA 1DCHA 4A3JK 1DCOA 1DCPA 4GTFA 3HOXK 4ILDA 3S14C 3K7AK 5IYDC 4Y7NC 2CW0A 1XXAA 1ZQ1C 4U67S 3N0CA 1IS1A 1USOA 4KN7A 4BXXC 3M3YC 2P5MA 4KC6A 5TJ3A 4KMHA 1I50A 4OIRA 1I6VA 4NOIA 4G7OA 3A8JA 2EBBA 3I4MK 3BP3A 1TWAA 3CQZC 3OPFA 3GTMC 3GTKC 3VA7A 1O27A 2B63C 4BBSC 5IYBK 2R93A 4A3IK 1R9TA 5IOQA 3GTJA 4BY7C
chains in the Genus database with same CATH topology
3K7AC 3S1RC 3RZDC 4OIQA 2R7ZC 4Q5SA 3GTQC 4LLGA 5IP7K 1Y1WC 1I3QK 2NVXC 4KMUA 2E2HC 3WODA 5FJ8K 2JA5K 4A3LC 1I6HC 1TWFC 4YFNA 5C44C 5TMCA 5C4XK 1TWHC 4XSXA 4QIWL 4A3EK 4GZYA 4C3IK 4QJVA 4A3MC 3GTPK 4C3HC 5C3EK 2R92K 4A3KC 1Y1VC 2YU9K 2JA8C 3M4OC 2NVYC 4AYBL 5M5YK 4C2MC 5M5XK 2JA7C 2E2IK 3S1MC 1I50K 1SFOC 1TWCK 3RZOK 4QIWD 3I4MC 4C3JC 1WCMC 3S1QK 3HOVK 4A3FC 5C4JK 4A3CC 4BBRK 4A3GC 4G7ZA 1TWAK 5IYCC 4KN4A 4Y52C 3HOZC 5FLMK 2O5IA 2E2JC 2WB1L 1BDFA 4MEXA 3GTLK 4LK1A 3EQLA 5IYBC 3H3VD 4A3IC 3S16K 4JK1A 2JA6K 4OINA 2R93K 2NVTK 2O5JA 2WB1D 2Y0SL 3GTJK 1R9TK 2PA8L 2BE5A 4QJVB 4BY1K 3S14K 3S15K 4Y7NK 5IYDK 4MEYA 5IP7C 4Q4ZA 1I3QC 2WAQL 2JA5C 4LK0A 3FKIC 4YFXA 4XLNA 4X6AK 2Y0SD 1SMYA 3GTOC 2PA8D 5C4XC 3S1NK 3H0GK 3S17K 4A3EC 4BXXK 3M3YK 4C3IC 3S2DK 4A3DK 3GTPC 1TWGK 5M5WK 5C3EC 2WAQD 2R92C 1ZYRA 2YU9C 3PO2C 3H3VL 4XLPA 2E2IC 4G7HA 1I50C 1K83K 1TWCC 3RZOC 3HKZL 3GTGK 4ZH4A 3S1QC 3HOVC 3PO3C 2NVQC 5C4JC 4BBRC 2VUMC 4A93K 1Y1VK 3CQZK 4A3BK 3HOWK 2NVYK 5IP9K 1TWAC 3GTMK 3GTKK 5FLMC 3S2HK 1SFOK 3HKZD 4A3JK 4C3JK 1XPPA 2A68A 4A3FK 2B63K 4BBSK 1IW7A 5D4DA 3I4NK 3S16C 2A6HA 3M4OK 2JA6C 4MQ9A 3HOXK 3HOUK 3HOZK 4YFKA 2R93C 2NVTC 4BY7K 3HOYK 4OIOA 3GTJC 1R9TC 4BY1C 4XSZA 3S14C 3S15C 3K7AK 3S1RK 5IYDC 4Y7NC 3RZDK 2R7ZK 3GTQK 5TMFA 1Y1WK 1YNNA 1YNJA 2NVXK 2CW0A 4X6AC 2E2HK 4A3LK 3S1NC 3H0GC 3S17C 4KN7A 4BXXC 1TWFK 2PMZD 3M3YC 3S2DC 2A69A 4A3DC 1TWHK 5C44K 1TWGC 4A3MK 4C3HK 4A3KK 3FKIK 4OIRA 1I6VA 4LJZA 4NOIA 2JA8K 1K83C 4G7OA 2PPBA 4C2MK 2JA7K 3GTOK 3GTGC 3S1MK 1I6HK 3I4MK 3GTLC 1WCMK 2A6EA 4A93C 3CQZC 4A3BC 3HOWC 3PO2K 3DXJA 5IP9C 4A3CK 4A3GK 3GTMC 1HQMA 3GTKC 3S2HC 5IYCK 4Y52K 4A3JC 4YG2A 2E2JK 3PO3K 2B63C 4BBSC 2NVQK 3I4NC 5IYBK 2VUMK 2PMZL 4AYBD 3HOXC 4OIPA 3HOUC 4A3IK 5M3FK 5M3MK 4BY7C 3HOYC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3K7A C;  3S1R C;  3RZD C;  4OIQ A;  2R7Z C;  4Q5S A;  3GTQ C;  4LLG A;  5IP7 K;  1Y1W C;  1I3Q K;  2NVX C;  4KMU A;  2E2H C;  3WOD A;  5FJ8 K;  2JA5 K;  4A3L C;  1I6H C;  1TWF C;  4YFN A;  5C44 C;  5TMC A;  5C4X K;  1TWH C;  4XSX A;  4QIW L;  4A3E K;  4GZY A;  4C3I K;  4QJV A;  4A3M C;  3GTP K;  4C3H C;  5C3E K;  2R92 K;  4A3K C;  1Y1V C;  2YU9 K;  2JA8 C;  3M4O C;  2NVY C;  4AYB L;  5M5Y K;  4C2M C;  5M5X K;  2JA7 C;  2E2I K;  3S1M C;  1I50 K;  1SFO C;  1TWC K;  3RZO K;  4QIW D;  3I4M C;  4C3J C;  1WCM C;  3S1Q K;  3HOV K;  4A3F C;  5C4J K;  4A3C C;  4BBR K;  4A3G C;  4G7Z A;  1TWA K;  5IYC C;  4KN4 A;  4Y52 C;  3HOZ C;  5FLM K;  2O5I A;  2E2J C;  2WB1 L;  1BDF A;  4MEX A;  3GTL K;  4LK1 A;  3EQL A;  5IYB C;  3H3V D;  4A3I C;  3S16 K;  4JK1 A;  2JA6 K;  4OIN A;  2R93 K;  2NVT K;  2O5J A;  2WB1 D;  2Y0S L;  3GTJ K;  1R9T K;  2PA8 L;  2BE5 A;  4QJV B;  4BY1 K;  3S14 K;  3S15 K;  4Y7N K;  5IYD K;  4MEY A;  5IP7 C;  4Q4Z A;  1I3Q C;  2WAQ L;  2JA5 C;  4LK0 A;  3FKI C;  4YFX A;  4XLN A;  4X6A K;  2Y0S D;  1SMY A;  3GTO C;  2PA8 D;  5C4X C;  3S1N K;  3H0G K;  3S17 K;  4A3E C;  4BXX K;  3M3Y K;  4C3I C;  3S2D K;  4A3D K;  3GTP C;  1TWG K;  5M5W K;  5C3E C;  2WAQ D;  2R92 C;  1ZYR A;  2YU9 C;  3PO2 C;  3H3V L;  4XLP A;  2E2I C;  4G7H A;  1I50 C;  1K83 K;  1TWC C;  3RZO C;  3HKZ L;  3GTG K;  4ZH4 A;  3S1Q C;  3HOV C;  3PO3 C;  2NVQ C;  5C4J C;  4BBR C;  2VUM C;  4A93 K;  1Y1V K;  3CQZ K;  4A3B K;  3HOW K;  2NVY K;  5IP9 K;  1TWA C;  3GTM K;  3GTK K;  5FLM C;  3S2H K;  1SFO K;  3HKZ D;  4A3J K;  4C3J K;  1XPP A;  2A68 A;  4A3F K;  2B63 K;  4BBS K;  1IW7 A;  5D4D A;  3I4N K;  3S16 C;  2A6H A;  3M4O K;  2JA6 C;  4MQ9 A;  3HOX K;  3HOU K;  3HOZ K;  4YFK A;  2R93 C;  2NVT C;  4BY7 K;  3HOY K;  4OIO A;  3GTJ C;  1R9T C;  4BY1 C;  4XSZ A;  3S14 C;  3S15 C;  3K7A K;  3S1R K;  5IYD C;  4Y7N C;  3RZD K;  2R7Z K;  3GTQ K;  5TMF A;  1Y1W K;  1YNN A;  1YNJ A;  2NVX K;  2CW0 A;  4X6A C;  2E2H K;  4A3L K;  3S1N C;  3H0G C;  3S17 C;  4KN7 A;  4BXX C;  1TWF K;  2PMZ D;  3M3Y C;  3S2D C;  2A69 A;  4A3D C;  1TWH K;  5C44 K;  1TWG C;  4A3M K;  4C3H K;  4A3K K;  3FKI K;  4OIR A;  1I6V A;  4LJZ A;  4NOI A;  2JA8 K;  1K83 C;  4G7O A;  2PPB A;  4C2M K;  2JA7 K;  3GTO K;  3GTG C;  3S1M K;  1I6H K;  3I4M K;  3GTL C;  1WCM K;  2A6E A;  4A93 C;  3CQZ C;  4A3B C;  3HOW C;  3PO2 K;  3DXJ A;  5IP9 C;  4A3C K;  4A3G K;  3GTM C;  1HQM A;  3GTK C;  3S2H C;  5IYC K;  4Y52 K;  4A3J C;  4YG2 A;  2E2J K;  3PO3 K;  2B63 C;  4BBS C;  2NVQ K;  3I4N C;  5IYB K;  2VUM K;  2PMZ L;  4AYB D;  3HOX C;  4OIP A;  3HOU C;  4A3I K;  5M3F K;  5M3M K;  4BY7 C;  3HOY C; 
#chains in the Genus database with same CATH topology
 2GSO A;  1EK8 A;  1VRQ C;  3AH5 A;  4OIQ A;  3LYW A;  2KWA A;  5IP7 K;  1I3Q K;  1XZP A;  5FJ8 K;  1TWG A;  4KAS A;  1TWH C;  4XSX A;  4C3I K;  5JVH S;  1XXC A;  2R92 K;  2YU9 K;  2JA8 C;  1WQF A;  2JA7 C;  2E2I K;  1SFO C;  3RZO K;  3L4J A;  1WCM C;  3G4A A;  3HOV K;  4A3C C;  1EI6 A;  4A3G C;  4Y52 C;  3HOZ C;  3AD8 C;  1XZQ A;  2WB1 L;  4MEX A;  3GTL K;  1IBA A;  4WF9 S;  3H3V D;  1XZP B;  4OIN A;  2XCO A;  2V6U A;  3PIO S;  1J98 A;  2O5J A;  2WB1 D;  1L0W A;  2PA8 L;  4FM9 A;  4Q4Z A;  4G0V A;  5IOS A;  4AH6 A;  3FKI C;  4YFX A;  5JVG S;  2PA8 D;  3HXA A;  3S1N K;  1Y1V A;  3S2D K;  1J6X A;  2NVY A;  4G7H A;  1XZQ B;  1I50 C;  1K83 K;  1EFW A;  3HKZ L;  3GTG K;  3S1Q C;  2ZUF A;  3PO3 C;  4KM8 A;  5DM6 S;  1ZXO A;  5JVO A;  4DDQ A;  1TWA C;  3S2H K;  5FLM C;  4PAA A;  3HKZ D;  2ZJR S;  5IOT A;  3AD7 C;  2RH6 A;  4A3F K;  5D4D A;  5E68 A;  3I4N K;  1J6W A;  4YFK A;  2R93 C;  3GTJ C;  1R9T C;  4XSZ A;  3S15 C;  3L4K A;  3S1R K;  1I3Q A;  1KQ4 A;  1JOE A;  2R7Z K;  3GTQ K;  1X31 C;  1Y1W K;  1YNN A;  2ZFZ A;  2NVX K;  3GEE A;  2KQ1 A;  4X6A C;  2E2H K;  3QX3 A;  1B4B A;  5CJ9 A;  1TWF K;  1C0A A;  2R92 A;  2PMZ D;  4A3D C;  2YU9 A;  3SZZ A;  1TWG C;  2E2I A;  4A3K K;  4P5B A;  4LJZ A;  3M4O K;  3GTO K;  4XCH A;  1WOO A;  4J3N A;  1PJ5 A;  1WQH A;  1JVI A;  2A6E A;  2PHC B;  4A3B C;  4KMD A;  3HOW C;  2GAH C;  3DXJ A;  5IP9 C;  3PO2 K;  1O28 A;  3PIP S;  1HQM A;  3GTL A;  5IYC K;  4A3J C;  2E2J K;  1PJ6 A;  1IE0 A;  4AYB D;  3HOX C;  2JH3 A;  3K7A C;  1G51 A;  5CHP A;  4KAT A;  3GSI A;  2JA5 K;  5HQH A;  1O26 A;  5TMC A;  3ERE D;  4QIW L;  4GZY A;  1WOR A;  1DD5 A;  3GTP K;  1K83 A;  2ZJP S;  5C3E K;  1Y1V C;  1O2B A;  3GTG A;  5M5Y K;  2NVY C;  5M5X K;  4GTD A;  4QIW D;  3I4M C;  4C3J C;  1IL2 A;  4BBR K;  4G7Z A;  4GTC A;  2O5I A;  1BDF A;  3GEH A;  3EQL A;  5IYB C;  3LPX A;  4A3I C;  3S16 K;  2RGR A;  4WFB S;  1WSR A;  2JA6 K;  3TFI A;  4WIL A;  2NVT K;  2R7Z A;  2V6S A;  4BY1 K;  3GTQ A;  1Y1W A;  4KAW X;  2NVX A;  4WFA S;  4KM9 A;  2E2H A;  5IP7 C;  1I3Q C;  2FQO A;  1TWF A;  4WCE S;  4GFQ A;  4KAR A;  3FHZ A;  1VH2 A;  3H0G K;  3S17 K;  3LAP A;  4WJ4 A;  4C3I C;  2CFA A;  5M5W K;  3GTO A;  2R92 C;  2FQT A;  2YU9 C;  5EGH A;  4XLP A;  3H3V L;  2E2I C;  4WFN S;  1ISE A;  3MML B;  3RZO C;  3HOV C;  4RMF A;  2NVQ C;  4IOC S;  2VUM C;  3Q3Q A;  3DLL S;  1F7V A;  4A93 K;  4GT9 A;  3ADA C;  1IQ0 A;  1SFO K;  1XXB A;  4GTE A;  2A68 A;  1WIH A;  1UV7 A;  1IW7 A;  3GIR A;  4C45 A;  4MQ9 A;  3HOU K;  1WSV A;  3HOZ K;  1YCL A;  3HOY K;  4OIO A;  1YX2 A;  2CFA B;  3CAG A;  3RZD K;  2JA5 A;  3BUE A;  4KB4 A;  5DM7 S;  3N3Y A;  4PAB A;  5HL8 A;  4A3L K;  3GTP A;  3S1N C;  1I6H K;  5C44 K;  3S2D C;  3G4C A;  1WQG A;  4A3M K;  4G0U A;  4WJ3 M;  4C3H K;  3FKI K;  1K83 C;  1VGX A;  4LQY A;  4C2M K;  3S1M K;  3GTG C;  4KMA A;  4G0W A;  3GDZ A;  1PJ7 A;  3S2H C;  4BLA A;  1ZVU A;  2JA6 A;  3PO3 K;  3I4N C;  2PMZ L;  4OIP A;  5M3F K;  1VLO A;  3AQP A;  2L5N A;  4O2D A;  4M1X A;  3TFH A;  4BLB A;  4LR2 A;  3S1R C;  1USM A;  3N0B A;  2R7Z C;  3GTQ C;  4LLG A;  1Y1W C;  2NVX C;  3H0G A;  2E2H C;  3WOD A;  2ZUE A;  2KXY A;  1TWF C;  4YFN A;  3SZY A;  5C4X K;  4P9S A;  4A3E K;  4A3K C;  3M4O C;  1FEU A;  4AYB L;  1TWC K;  2L3U A;  2XCR B;  1SFO A;  5C4J K;  5IYC C;  4BKW A;  2E2J C;  1WOS A;  1BJT A;  1GE9 A;  4KB2 A;  2Y0S L;  3S14 K;  2BE5 A;  4Y7N K;  5IYD K;  4MEY A;  5JFE A;  2WAQ L;  2JA5 C;  4LK0 A;  4XLN A;  1EQR A;  2Y0S D;  1SMY A;  4BXX K;  3M3Y K;  3FKI A;  4KDD A;  3GTP C;  5C3E C;  2WAQ D;  3JST A;  4IO9 S;  4GTB A;  1O25 A;  4ZH4 A;  3T02 A;  2GAG C;  4BBR C;  1Y1V K;  3CQZ K;  2NVY K;  4FZB A;  4GTA A;  3GTM K;  3GTK K;  4C3J K;  1XPP A;  2B63 K;  4BBS K;  3S16 C;  2A6H A;  2JA6 C;  2NVT C;  1V5V A;  4BY7 K;  4BY1 C;  1F93 A;  2D6F C;  3OEP A;  3IPJ A;  3S0X A;  3NUH A;  4P5A A;  3CF5 S;  5TMF A;  1YNJ A;  3H0G C;  3S17 C;  3AQO A;  2A69 A;  1TWH K;  3TTG A;  2GSN A;  1TWC A;  2JA8 K;  2GSU A;  2PPB A;  2JA7 K;  2V6T A;  1BGW A;  2ZJQ S;  2KPU A;  3GTL C;  1WCM K;  4A93 C;  4A3C K;  2Y3P A;  4A3G K;  4LOW A;  4Y52 K;  1B4A A;  4YG2 A;  3AD9 C;  4IOA S;  2NVQ K;  2VUM K;  2W7V A;  3HOU C;  3A8I A;  5M3M K;  5HL7 S;  1WOP A;  3HOY C;  1O2F B;  3RZD C;  4Q5S A;  1JQW A;  4KMU A;  1HI9 A;  5L46 A;  4A3L C;  1RU0 A;  1I6H C;  5C44 C;  3BP8 C;  3T01 A;  1O29 A;  4QJV A;  4A3M C;  3LAJ A;  4C3H C;  1VJE A;  3T00 A;  4C2M C;  3S1M C;  1I50 K;  3CQZ A;  3S1Q K;  1INN A;  4A3F C;  3GTK A;  3GTM A;  3FOE A;  1F9N A;  4KN4 A;  1TWA K;  1BS2 A;  2B63 A;  5FLM K;  4LK1 A;  1AB4 A;  1EH1 A;  4JK1 A;  5EGE A;  2R93 K;  3GTJ K;  1R9T K;  4QJV B;  3S15 K;  3ORE A;  3GEI A;  3FOF A;  1O24 A;  1TWH A;  4X6A K;  3GTO C;  5C4X C;  3TFJ A;  4A3E C;  4A3D K;  1TWG K;  2JA7 A;  1ZYR A;  1F7U A;  5IOR A;  3PO2 C;  1ZBS A;  1WCM A;  1TWC C;  1J6V A;  2XCQ A;  1O2A A;  2P8T A;  5C4J C;  4A3B K;  3HOW K;  5IP9 K;  3V4G A;  3A8K A;  4GTL A;  2VUM A;  1DCH A;  4A3J K;  1DCO A;  1DCP A;  4GTF A;  3HOX K;  4ILD A;  3S14 C;  3K7A K;  5IYD C;  4Y7N C;  2CW0 A;  1XXA A;  1ZQ1 C;  4U67 S;  3N0C A;  1IS1 A;  1USO A;  4KN7 A;  4BXX C;  3M3Y C;  2P5M A;  4KC6 A;  5TJ3 A;  4KMH A;  1I50 A;  4OIR A;  1I6V A;  4NOI A;  4G7O A;  3A8J A;  2EBB A;  3I4M K;  3BP3 A;  1TWA A;  3CQZ C;  3OPF A;  3GTM C;  3GTK C;  3VA7 A;  1O27 A;  2B63 C;  4BBS C;  5IYB K;  2R93 A;  4A3I K;  1R9T A;  5IOQ A;  3GTJ A;  4BY7 C; 
#chains in the Genus database with same CATH homology
 3K7A C;  3S1R C;  3RZD C;  4OIQ A;  2R7Z C;  4Q5S A;  3GTQ C;  4LLG A;  5IP7 K;  1Y1W C;  1I3Q K;  2NVX C;  4KMU A;  2E2H C;  3WOD A;  5FJ8 K;  2JA5 K;  4A3L C;  1I6H C;  1TWF C;  4YFN A;  5C44 C;  5TMC A;  5C4X K;  1TWH C;  4XSX A;  4QIW L;  4A3E K;  4GZY A;  4C3I K;  4QJV A;  4A3M C;  3GTP K;  4C3H C;  5C3E K;  2R92 K;  4A3K C;  1Y1V C;  2YU9 K;  2JA8 C;  3M4O C;  2NVY C;  4AYB L;  5M5Y K;  4C2M C;  5M5X K;  2JA7 C;  2E2I K;  3S1M C;  1I50 K;  1SFO C;  1TWC K;  3RZO K;  4QIW D;  3I4M C;  4C3J C;  1WCM C;  3S1Q K;  3HOV K;  4A3F C;  5C4J K;  4A3C C;  4BBR K;  4A3G C;  4G7Z A;  1TWA K;  5IYC C;  4KN4 A;  4Y52 C;  3HOZ C;  5FLM K;  2O5I A;  2E2J C;  2WB1 L;  1BDF A;  4MEX A;  3GTL K;  4LK1 A;  3EQL A;  5IYB C;  3H3V D;  4A3I C;  3S16 K;  4JK1 A;  2JA6 K;  4OIN A;  2R93 K;  2NVT K;  2O5J A;  2WB1 D;  2Y0S L;  3GTJ K;  1R9T K;  2PA8 L;  2BE5 A;  4QJV B;  4BY1 K;  3S14 K;  3S15 K;  4Y7N K;  5IYD K;  4MEY A;  5IP7 C;  4Q4Z A;  1I3Q C;  2WAQ L;  2JA5 C;  4LK0 A;  3FKI C;  4YFX A;  4XLN A;  4X6A K;  2Y0S D;  1SMY A;  3GTO C;  2PA8 D;  5C4X C;  3S1N K;  3H0G K;  3S17 K;  4A3E C;  4BXX K;  3M3Y K;  4C3I C;  3S2D K;  4A3D K;  3GTP C;  1TWG K;  5M5W K;  5C3E C;  2WAQ D;  2R92 C;  1ZYR A;  2YU9 C;  3PO2 C;  3H3V L;  4XLP A;  2E2I C;  4G7H A;  1I50 C;  1K83 K;  1TWC C;  3RZO C;  3HKZ L;  3GTG K;  4ZH4 A;  3S1Q C;  3HOV C;  3PO3 C;  2NVQ C;  5C4J C;  4BBR C;  2VUM C;  4A93 K;  1Y1V K;  3CQZ K;  4A3B K;  3HOW K;  2NVY K;  5IP9 K;  1TWA C;  3GTM K;  3GTK K;  5FLM C;  3S2H K;  1SFO K;  3HKZ D;  4A3J K;  4C3J K;  1XPP A;  2A68 A;  4A3F K;  2B63 K;  4BBS K;  1IW7 A;  5D4D A;  3I4N K;  3S16 C;  2A6H A;  3M4O K;  2JA6 C;  4MQ9 A;  3HOX K;  3HOU K;  3HOZ K;  4YFK A;  2R93 C;  2NVT C;  4BY7 K;  3HOY K;  4OIO A;  3GTJ C;  1R9T C;  4BY1 C;  4XSZ A;  3S14 C;  3S15 C;  3K7A K;  3S1R K;  5IYD C;  4Y7N C;  3RZD K;  2R7Z K;  3GTQ K;  5TMF A;  1Y1W K;  1YNN A;  1YNJ A;  2NVX K;  2CW0 A;  4X6A C;  2E2H K;  4A3L K;  3S1N C;  3H0G C;  3S17 C;  4KN7 A;  4BXX C;  1TWF K;  2PMZ D;  3M3Y C;  3S2D C;  2A69 A;  4A3D C;  1TWH K;  5C44 K;  1TWG C;  4A3M K;  4C3H K;  4A3K K;  3FKI K;  4OIR A;  1I6V A;  4LJZ A;  4NOI A;  2JA8 K;  1K83 C;  4G7O A;  2PPB A;  4C2M K;  2JA7 K;  3GTO K;  3GTG C;  3S1M K;  1I6H K;  3I4M K;  3GTL C;  1WCM K;  2A6E A;  4A93 C;  3CQZ C;  4A3B C;  3HOW C;  3PO2 K;  3DXJ A;  5IP9 C;  4A3C K;  4A3G K;  3GTM C;  1HQM A;  3GTK C;  3S2H C;  5IYC K;  4Y52 K;  4A3J C;  4YG2 A;  2E2J K;  3PO3 K;  2B63 C;  4BBS C;  2NVQ K;  3I4N C;  5IYB K;  2VUM K;  2PMZ L;  4AYB D;  3HOX C;  4OIP A;  3HOU C;  4A3I K;  5M3F K;  5M3M K;  4BY7 C;  3HOY C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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