2KKXA

Solution structure of c-terminal domain of reduced nleg2-3 (residues 90-191) from pathogenic e. coli o157:h7. northeast structural genomics consortium and midwest center for structural genomics target et109a
Total Genus 19

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
19
sequence length
102
structure length
102
Chain Sequence
SQESIQNKISQCKFSVCPERLQCPLEAIQCPITLEQPEKGIFVKNSDGSDVCTLFDAAAFSRLVGEGLPHPLTREPITASIIVKHEECIYDDTRGNFIIKGN

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (91-101)EMPTYUpdating...
connected with : NaN
molecule tags Structural genomics, unknown function
source organism Escherichia coli
publication title NleG Type 3 effectors from enterohaemorrhagic Escherichia coli are U-Box E3 ubiquitin ligases.
pubmed doi rcsb
molecule keywords Uncharacterized protein ECs2156
total genus 19
structure length 102
sequence length 102
ec nomenclature
pdb deposition date 2009-06-29
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.40.80 Alpha Beta 2-Layer Sandwich Herpes Virus-1 Herpes Virus-1 2kkxA00
2KKXA 2KKYA
chains in the Genus database with same CATH superfamily
3KQIA 3U5OA 5B79A 4NN2A 2FUUA 3LVRE 3EB5A 4MVTA 2EODA 4MSXA 2DSMA 3O7AA 4FIPA 4YBMA 4A4BA 3ASLA 4GNGA 1U6GB 3HCUA 1MBMA 4QQ4A 2HYED 4WA6A 4I7BA 4QF3A 5TBNA 1X4JA 2L5UA 4WZ2A 2QIZA 4BBQA 5SVYA 4FO9A 2KGGA 2L43A 3N9QA 4LADB 2LRIC 2M6MA 2CRWA 3LDYA 4Z0RA 5B76A 5K3QA 2E6SA 2KKXA 3SUBA 3MHSA 2KWOA 2JMJA 5DKAA 2L0BA 2LGLA 3Q1DA 4Z0OA 4H9DA 2DX8A 2YUCA 2VJFA 2CKLB 4OGEA 2CT2A 3KNVA 4LK9A 2CSZA 2Y1MA 3ZPV1 5LKZA 4F1PA 4AUQB 5D1LB 2MA6A 2YQMA 2E6RA 2OWAA 2RI7A 3KV5A 2ZETC 1WEUA 2QICA 5B78A 3JUEA 3GV4A 2M1RA 2CONA 4YBSA 4IC2A 3O36A 5G0FA 4YBTA 2YHNA 2MA5A 4WZ0A 3O70A 3ZVZB 5H9MA 5TRBA 1T1HA 2YQLA 2F42A 2VNFA 2LAUA 1MM3A 2JMIA 3T9KA 1WEWA 4UI9B 4X3GA 4BHWA 2D8UA 2LGKA 3PHDA 2KE1A 4PPEA 4ZQLA 3N9OA 2F6JA 3O37A 2XOYA 4S3OB 2B0OE 4ZDTA 2IDAA 2QJ0A 3I2DA 4O64A 4R7EA 2Y1NA 5TDWA 2XOCA 3N9MA 3FJUB 2JRJA 3C5KA 2HDPA 3EB6A 3MDBC 4IC3A 4UP0A 1MM2A 2VPBA 5D1MB 5G05B 2VPDA 3LQJA 2ECNA 4R8PK 3T7LA 2MD7B 1WILA 2MNZA 3DQVR 2YW8A 3T6RA 2VJFB 4YC9A 2P57A 2EGMA 4PTBA 3FL2A 3FEHA 3VK6A 5B8DA 3O35A 3L11A 2FUIA 2DJAA 3ZYQA 1X4IA 1DVPA 2D8SA 1WFKA 3N9NA 2LV9A 2ECGA 2LQ6A 4AYCA 4CCGX 5H1VA 5AITA 3DPLR 4ZUXU 2M85A 4QF2A 2LN0A 3O34A 4GNDA 5KH7A 4F52B 5JG6A 5TDRA 3E2DA 3L1XA 3SOUA 3O33A 5AIUA 2EXUA 4OGCA 2PUYA 3DDTA 1G25A 2YREA 3QZVA 4S3OC 5KH3A 3PUQA 2LXPC 3HTKC 1HYIA 1Z60A 1WEQA 4AP4A 4A4CA 3O47A 1WEVA 4N4FA 1F62A 5LKXA 4YADA 2CSYA 2XEUA 2IQJA 3LVQE 4XI1A 2PNXA 2M3HA 1WE9A 2KWJA 2H0DA 3SOXA 3ZNIA 1VFYA 5I3LA 2KFTA 4FJCA 1WGMA 5LCWB 2LDRA 4V3LC 4TKPB 1XWHA 4WZ3B 2KKYA 1WEPA 3LJUX 2VPEA 2FFWA 5TABA 2AN6A 2JUNA 1JM7B 1RMDA 5B75A 1VYXA 1ZBDB 2KREA 5H1TA 5FEYA 2MD8C 4LJNA 3HCTA 2F6NA 3ZPVE 1WEEA 1Z2QA 4AYCB 2ECWA 4A0CD 3ZVYA 5H1UA 2CSVA 2YURA 2VPGA 1FBVA 3U5PA 2LXHC 3HCSA 2KU3A 2L7PA 3H7HA 2KIZA 1LDJB 2JM3A 4UP5A 2YVRA 1JM7A 1JOCA 2LGGA 2LGVA 2VJEA 2Y43A 3SHBA 2YT5A 1CHCA 4P5OB 4YABA 2I50A 1WENA 2KWNA 3LQHA 4R2YA 1WEMA 4I7CA 3NG2A 4O62A 2KGIA 4AVXA 4V3KC 1WESA 3N9PA 2E61A 4Q6FA 4I7DA 5SVIA 2YSMA 3ZTGA 3FAOA 4N3WA 2CRRA 2MKEA 1BORA 2H0DB 5DINA 2G6QA 2XP0A 2KWKA 3RPGB 3MHHA 4FK5A 2YYRA 4GNFA 4C9ZA 4CA1A 5C11A 2ECVA 2JMDA 4GNEA 5J3XA 4A49A 3PLWA 2C2LA 2FSAA 3KDEC 2ECTA 3M62A 2K16A 2OXQC 3U5NA 3L1ZB 4LKAA 1FP0A 3FANA 2K17A 2C2VS 2M13A 5B77A 2YU4A 1IYMA 3N9LA 3PURA 5LKTA 3IHPA 2XOZA 2KYUA 2RSDA 3LRQA 2G43A 2MT5A 5FERA 3DWDA 2XB1A 1N87A 2BAYA 4LLBA 2K1JA 2UZGA 2YSJA 3M63A 5C13A 1Z6UA 2MNYA 2K4DA 1WEOA 3LQIA 2G45A 1K2FA 2FD4A 5D1KB 2ECIA 4B86C 4B7YC 3M7KA 5SVXA 2VJEB 3SOWA 2RR4A 3KV6A 3M99A 2ECJA 1X4UA 5FB0A 4YAXA 2YHOA 2EA6A 2MUMA 2L75A 2CKLA 2L80A 4YATA 1WIMA 3C6WA 5SVIB 5LKUA 5EYAF 5FB1A 2EGPA 3RPGC 1V87A 4L7XA 1E4UA 2KR4A 5G04B 4W4UA 4GB0A 1LDKC 2MIQA 1DCQA 3FM8C 3U5MA 1VD4A 3V43A 2NAAA 5KH9A 4L58A 3GL6A 3RTRB 2VP7A 1HYJA
chains in the Genus database with same CATH topology
2XOZA 4O62A 5SVXA 4OGEA 3DDTA 2CONA 2L7PA 3H7HA 2XOYA 3DWDA 2RR4A 2E61A 2YREA 3PLWA 2B0OE 5SVIA 2CRWA 3LVRE 3LDYA 2JM3A 4Z0RA 3KDEC 4F1PA 2YVRA 5K3QA 1DCQA 2P57A 2CRRA 2KKXA 2MKEA 2EGMA 3FM8C 3SUBA 2KKYA 3O47A 2M13A 3LJUX 4QQ4A 2LAUA 2FFWA 3Q1DA 2OWAA 2XP0A 2XOCA 3E2DA 4Z0OA 3FJUB 4H9DA 5SVYA 5SVIB 3T9KA 3FEHA 2IQJA 2CSVA 2D8UA 3LVQE 2FD4A 2JUNA 3MDBC 3M7KA 2DJAA 3JUEA 2EXUA 4OGCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2KKX A;  2KKY A; 
#chains in the Genus database with same CATH topology
 3KQI A;  3U5O A;  5B79 A;  4NN2 A;  2FUU A;  3LVR E;  3EB5 A;  4MVT A;  2EOD A;  4MSX A;  2DSM A;  3O7A A;  4FIP A;  4YBM A;  4A4B A;  3ASL A;  4GNG A;  1U6G B;  3HCU A;  1MBM A;  4QQ4 A;  2HYE D;  4WA6 A;  4I7B A;  4QF3 A;  5TBN A;  1X4J A;  2L5U A;  4WZ2 A;  2QIZ A;  4BBQ A;  5SVY A;  4FO9 A;  2KGG A;  2L43 A;  3N9Q A;  4LAD B;  2LRI C;  2M6M A;  2CRW A;  3LDY A;  4Z0R A;  5B76 A;  5K3Q A;  2E6S A;  2KKX A;  3SUB A;  3MHS A;  2KWO A;  2JMJ A;  5DKA A;  2L0B A;  2LGL A;  3Q1D A;  4Z0O A;  4H9D A;  2DX8 A;  2YUC A;  2VJF A;  2CKL B;  4OGE A;  2CT2 A;  3KNV A;  4LK9 A;  2CSZ A;  2Y1M A;  3ZPV 1;  5LKZ A;  4F1P A;  4AUQ B;  5D1L B;  2MA6 A;  2YQM A;  2E6R A;  2OWA A;  2RI7 A;  3KV5 A;  2ZET C;  1WEU A;  2QIC A;  5B78 A;  3JUE A;  3GV4 A;  2M1R A;  2CON A;  4YBS A;  4IC2 A;  3O36 A;  5G0F A;  4YBT A;  2YHN A;  2MA5 A;  4WZ0 A;  3O70 A;  3ZVZ B;  5H9M A;  5TRB A;  1T1H A;  2YQL A;  2F42 A;  2VNF A;  2LAU A;  1MM3 A;  2JMI A;  3T9K A;  1WEW A;  4UI9 B;  4X3G A;  4BHW A;  2D8U A;  2LGK A;  3PHD A;  2KE1 A;  4PPE A;  4ZQL A;  3N9O A;  2F6J A;  3O37 A;  2XOY A;  4S3O B;  2B0O E;  4ZDT A;  2IDA A;  2QJ0 A;  3I2D A;  4O64 A;  4R7E A;  2Y1N A;  5TDW A;  2XOC A;  3N9M A;  3FJU B;  2JRJ A;  3C5K A;  2HDP A;  3EB6 A;  3MDB C;  4IC3 A;  4UP0 A;  1MM2 A;  2VPB A;  5D1M B;  5G05 B;  2VPD A;  3LQJ A;  2ECN A;  4R8P K;  3T7L A;  2MD7 B;  1WIL A;  2MNZ A;  3DQV R;  2YW8 A;  3T6R A;  2VJF B;  4YC9 A;  2P57 A;  2EGM A;  4PTB A;  3FL2 A;  3FEH A;  3VK6 A;  5B8D A;  3O35 A;  3L11 A;  2FUI A;  2DJA A;  3ZYQ A;  1X4I A;  1DVP A;  2D8S A;  1WFK A;  3N9N A;  2LV9 A;  2ECG A;  2LQ6 A;  4AYC A;  4CCG X;  5H1V A;  5AIT A;  3DPL R;  4ZUX U;  2M85 A;  4QF2 A;  2LN0 A;  3O34 A;  4GND A;  5KH7 A;  4F52 B;  5JG6 A;  5TDR A;  3E2D A;  3L1X A;  3SOU A;  3O33 A;  5AIU A;  2EXU A;  4OGC A;  2PUY A;  3DDT A;  1G25 A;  2YRE A;  3QZV A;  4S3O C;  5KH3 A;  3PUQ A;  2LXP C;  3HTK C;  1HYI A;  1Z60 A;  1WEQ A;  4AP4 A;  4A4C A;  3O47 A;  1WEV A;  4N4F A;  1F62 A;  5LKX A;  4YAD A;  2CSY A;  2XEU A;  2IQJ A;  3LVQ E;  4XI1 A;  2PNX A;  2M3H A;  1WE9 A;  2KWJ A;  2H0D A;  3SOX A;  3ZNI A;  1VFY A;  5I3L A;  2KFT A;  4FJC A;  1WGM A;  5LCW B;  2LDR A;  4V3L C;  4TKP B;  1XWH A;  4WZ3 B;  2KKY A;  1WEP A;  3LJU X;  2VPE A;  2FFW A;  5TAB A;  2AN6 A;  2JUN A;  1JM7 B;  1RMD A;  5B75 A;  1VYX A;  1ZBD B;  2KRE A;  5H1T A;  5FEY A;  2MD8 C;  4LJN A;  3HCT A;  2F6N A;  3ZPV E;  1WEE A;  1Z2Q A;  4AYC B;  2ECW A;  4A0C D;  3ZVY A;  5H1U A;  2CSV A;  2YUR A;  2VPG A;  1FBV A;  3U5P A;  2LXH C;  3HCS A;  2KU3 A;  2L7P A;  3H7H A;  2KIZ A;  1LDJ B;  2JM3 A;  4UP5 A;  2YVR A;  1JM7 A;  1JOC A;  2LGG A;  2LGV A;  2VJE A;  2Y43 A;  3SHB A;  2YT5 A;  1CHC A;  4P5O B;  4YAB A;  2I50 A;  1WEN A;  2KWN A;  3LQH A;  4R2Y A;  1WEM A;  4I7C A;  3NG2 A;  4O62 A;  2KGI A;  4AVX A;  4V3K C;  1WES A;  3N9P A;  2E61 A;  4Q6F A;  4I7D A;  5SVI A;  2YSM A;  3ZTG A;  3FAO A;  4N3W A;  2CRR A;  2MKE A;  1BOR A;  2H0D B;  5DIN A;  2G6Q A;  2XP0 A;  2KWK A;  3RPG B;  3MHH A;  4FK5 A;  2YYR A;  4GNF A;  4C9Z A;  4CA1 A;  5C11 A;  2ECV A;  2JMD A;  4GNE A;  5J3X A;  4A49 A;  3PLW A;  2C2L A;  2FSA A;  3KDE C;  2ECT A;  3M62 A;  2K16 A;  2OXQ C;  3U5N A;  3L1Z B;  4LKA A;  1FP0 A;  3FAN A;  2K17 A;  2C2V S;  2M13 A;  5B77 A;  2YU4 A;  1IYM A;  3N9L A;  3PUR A;  5LKT A;  3IHP A;  2XOZ A;  2KYU A;  2RSD A;  3LRQ A;  2G43 A;  2MT5 A;  5FER A;  3DWD A;  2XB1 A;  1N87 A;  2BAY A;  4LLB A;  2K1J A;  2UZG A;  2YSJ A;  3M63 A;  5C13 A;  1Z6U A;  2MNY A;  2K4D A;  1WEO A;  3LQI A;  2G45 A;  1K2F A;  2FD4 A;  5D1K B;  2ECI A;  4B86 C;  4B7Y C;  3M7K A;  5SVX A;  2VJE B;  3SOW A;  2RR4 A;  3KV6 A;  3M99 A;  2ECJ A;  1X4U A;  5FB0 A;  4YAX A;  2YHO A;  2EA6 A;  2MUM A;  2L75 A;  2CKL A;  2L80 A;  4YAT A;  1WIM A;  3C6W A;  5SVI B;  5LKU A;  5EYA F;  5FB1 A;  2EGP A;  3RPG C;  1V87 A;  4L7X A;  1E4U A;  2KR4 A;  5G04 B;  4W4U A;  4GB0 A;  1LDK C;  2MIQ A;  1DCQ A;  3FM8 C;  3U5M A;  1VD4 A;  3V43 A;  2NAA A;  5KH9 A;  4L58 A;  3GL6 A;  3RTR B;  2VP7 A;  1HYJ A; 
#chains in the Genus database with same CATH homology
 2XOZ A;  4O62 A;  5SVX A;  4OGE A;  3DDT A;  2CON A;  2L7P A;  3H7H A;  2XOY A;  3DWD A;  2RR4 A;  2E61 A;  2YRE A;  3PLW A;  2B0O E;  5SVI A;  2CRW A;  3LVR E;  3LDY A;  2JM3 A;  4Z0R A;  3KDE C;  4F1P A;  2YVR A;  5K3Q A;  1DCQ A;  2P57 A;  2CRR A;  2KKX A;  2MKE A;  2EGM A;  3FM8 C;  3SUB A;  2KKY A;  3O47 A;  2M13 A;  3LJU X;  4QQ4 A;  2LAU A;  2FFW A;  3Q1D A;  2OWA A;  2XP0 A;  2XOC A;  3E2D A;  4Z0O A;  3FJU B;  4H9D A;  5SVY A;  5SVI B;  3T9K A;  3FEH A;  2IQJ A;  2CSV A;  2D8U A;  3LVQ E;  2FD4 A;  2JUN A;  3MDB C;  3M7K A;  2DJA A;  3JUE A;  2EXU A;  4OGC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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