4O62A

Cw-type zinc finger of zcwpw2 in complex with the amino terminus of histone h3
Total Genus 10
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
10
sequence length
56
structure length
56
Chain Sequence
ENMYVNKVWVQCENENCLKWRLLSSEDSAKVDHDEPWYCFMNTDSRYNNCSISEED
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Metal/dna binding protein
source organism Homo sapiens
publication title Family-wide Characterization of Histone Binding Abilities of Human CW Domain-containing Proteins.
pubmed doi rcsb
molecule keywords Zinc finger CW-type PWWP domain protein 2
total genus 10
structure length 56
sequence length 56
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2013-12-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07496 zf-CW CW-type Zinc Finger
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.40.100 Alpha Beta 2-Layer Sandwich Herpes Virus-1 Herpes Virus-1 4o62A00
5SVXA 4Z0RA 2RR4A 5SVIB 4O62A 4Z0OA 2E61A 4QQ4A 5SVYA 5SVIA 2L7PA
chains in the Genus database with same CATH superfamily
2L43A 4QF3A 5LCWB 2G6QA 3DWDA 2QIZA 4YADA 2KWKA 4W4UA 2VPGA 2FUIA 3PUQA 4A4BA 2KGGA 4H9DA 1F62A 3HCUA 1DCQA 4Z0OA 5G0FA 3GL6A 4GNDA 1ZBDB 3RTRB 3LVQE 1G25A 5TBNA 2KE1A 3DDTA 5G04B 5I3LA 2EA6A 4I7CA 4I7BA 2CSZA 3M7KA 2XOYA 3LJUX 2YVRA 5TDRA 1DVPA 2KWJA 5H1TA 2MKEA 1N87A 4R7EA 4P5OB 1WEEA 3O34A 2M85A 5KH7A 3O33A 2CRRA 2MD7B 2XOZA 1T1HA 4AYCA 3ZNIA 4MVTA 3HCSA 5B8DA 2PUYA 5LKZA 1IYMA 2E6RA 2LXHC 3SOXA 4O64A 1WIMA 2LGGA 3JUEA 1E4UA 3LRQA 2VP7A 3N9QA 3ZPVE 2LDRA 4S3OB 2LN0A 4R2YA 1LDKC 2YUCA 4IC2A 4NN2A 3NG2A 3O37A 2DX8A 5FB0A 2LGKA 1WENA 3O35A 3QZVA 2LGVA 2EXUA 4C9ZA 2I50A 3HTKC 1Z6UA 1WEQA 4O62A 3SHBA 4YATA 2YQLA 2VNFA 5LKUA 1MBMA 1WEUA 2XP0A 4LADB 2VPBA 4WA6A 2YREA 2K1JA 4QF2A 3EB5A 1CHCA 5SVXA 1RMDA 3L1XA 4LLBA 2B0OE 2G45A 2D8UA 2LV9A 2KFTA 3N9PA 3GV4A 4OGCA 3ASLA 3N9LA 2RI7A 2EGMA 4OGEA 2L80A 5SVIA 3DPLR 3HCTA 1VFYA 4A0CD 2YURA 2K4DA 3MHHA 5DINA 4LKAA 4XI1A 2H0DA 3RPGC 3LQHA 2G43A 3N9OA 4A4CA 3SUBA 2QJ0A 3M62A 2ECJA 2M3HA 2VJEB 2MD8C 2FFWA 3MDBC 5TDWA 2KIZA 5AITA 2CKLA 3EB6A 1WEVA 3O36A 1JM7B 5G05B 2K16A 4IC3A 2MUMA 2KR4A 3LQJA 3L11A 4UP5A 1WESA 2ECIA 4WZ2A 2KWNA 2YSJA 2LGLA 3H7HA 2CONA 4PTBA 5K3QA 1FP0A 3FM8C 5LKXA 4YBMA 1Z60A 2VJFB 4PPEA 2Y1MA 4ZUXU 3O70A 2F6JA 2CT2A 2JMDA 5EYAF 4B7YC 4X3GA 5D1LB 5TABA 1JOCA 2KREA 2DSMA 4B86C 3T7LA 2CSVA 2IDAA 5JG6A 2MNYA 2RR4A 4GNFA 5H1UA 2M13A 2FUUA 4YBSA 1MM3A 2M1RA 2QICA 2JRJA 4YC9A 3N9MA 3ZVZB 3SOUA 4LJNA 2FD4A 4TKPB 1VD4A 3ZVYA 2ECNA 5D1MB 4FO9A 1WE9A 3KDEC 1BORA 2C2LA 3M63A 5FEYA 1Z2QA 3ZPV1 4MSXA 3N9NA 2JUNA 1WEMA 4L7XA 3FANA 1LDJB 2ECGA 5SVYA 4V3KC 2LXPC 2YW8A 2ECWA 5DKAA 2JM3A 5KH9A 2RSDA 3KNVA 3LQIA 1WEPA 3T9KA 3PHDA 2XEUA 4BHWA 4CCGX 3RPGB 3U5NA 4YBTA 4R8PK 2KYUA 5D1KB 4AYCB 3PLWA 4AUQB 2YYRA 3SOWA 2ECTA 1WGMA 2EGPA 2KKXA 3FJUB 1WFKA 2YQMA 3LDYA 2OWAA 4I7DA 5B79A 2LQ6A 2E61A 2MA5A 4FJCA 2VPEA 2JMIA 3DQVR 5C11A 5J3XA 2CSYA 2K17A 1MM2A 4FK5A 2AN6A 3C5KA 2CRWA 5H9MA 3E2DA 3MHSA 2YT5A 4FIPA 1FBVA 2KWOA 3M99A 4UP0A 1X4JA 3KV5A 2KU3A 2XB1A 3ZYQA 4CA1A 3VK6A 4F52B 3KV6A 2UZGA 3O47A 4YABA 2MT5A 2F6NA 2HDPA 3L1ZB 3I2DA 1V87A 2BAYA 2EODA 4BBQA 2JMJA 2HYED 4ZQLA 2P57A 3KQIA 2KKYA 4UI9B 3C6WA 5B75A 4A49A 2XOCA 2LAUA 2YSMA 3Q1DA 5SVIB 2L5UA 2OXQC 1HYJA 2E6SA 2C2VS 2M6MA 5KH3A 2H0DB 4V3LC 5H1VA 5C13A 4ZDTA 2FSAA 4Z0RA 2VJEA 4GB0A 4LK9A 2MIQA 1XWHA 4AP4A 1VYXA 3U5MA 1HYIA 4N4FA 1JM7A 1X4UA 3IHPA 2CKLB 4S3OC 2MNZA 3ZTGA 3LVRE 4QQ4A 1X4IA 5TRBA 3O7AA 2YHNA 2L0BA 2Y1NA 2YHOA 3V43A 2VPDA 3U5OA 4AVXA 1WEWA 1WEOA 2L7PA 3FAOA 2DJAA 2VJFA 3T6RA 4WZ0A 1U6GB 3FL2A 1K2FA 2NAAA 4GNEA 3PURA 4N3WA 5B78A 4GNGA 5FERA 2MA6A 3U5PA 4WZ3B 5B77A 2KGIA 5B76A 3FEHA 2YU4A 4YAXA 4F1PA 4Q6FA 5AIUA 2ECVA 2D8SA 1WILA 2IQJA 2L75A 4L58A 2F42A 2PNXA 5FB1A 2ZETC 5LKTA 2Y43A 2LRIC
chains in the Genus database with same CATH topology
2CRRA 5SVXA 2RR4A 2XOZA 3LVRE 2B0OE 3DWDA 4QQ4A 2D8UA 2EXUA 3DDTA 2JUNA 3SUBA 3PLWA 2M13A 4Z0RA 3FEHA 3M7KA 4F1PA 2XOYA 3JUEA 2CRWA 3LJUX 4OGCA 5SVYA 4H9DA 2P57A 2YVRA 3E2DA 2KKXA 1DCQA 2KKYA 3FJUB 2FD4A 4O62A 2EGMA 2FFWA 3H7HA 3MDBC 4Z0OA 2CONA 2JM3A 2MKEA 4OGEA 5K3QA 2L7PA 2IQJA 2DJAA 2XOCA 5SVIA 2OWAA 2LAUA 3FM8C 3LDYA 3Q1DA 5SVIB 2CSVA 2XP0A 3T9KA 2E61A 3KDEC 2YREA 3LVQE 3O47A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5SVX A;  4Z0R A;  2RR4 A;  5SVI B;  4O62 A;  4Z0O A;  2E61 A;  4QQ4 A;  5SVY A;  5SVI A;  2L7P A; 
#chains in the Genus database with same CATH topology
 2L43 A;  4QF3 A;  5LCW B;  2G6Q A;  3DWD A;  2QIZ A;  4YAD A;  2KWK A;  4W4U A;  2VPG A;  2FUI A;  3PUQ A;  4A4B A;  2KGG A;  4H9D A;  1F62 A;  3HCU A;  1DCQ A;  4Z0O A;  5G0F A;  3GL6 A;  4GND A;  1ZBD B;  3RTR B;  3LVQ E;  1G25 A;  5TBN A;  2KE1 A;  3DDT A;  5G04 B;  5I3L A;  2EA6 A;  4I7C A;  4I7B A;  2CSZ A;  3M7K A;  2XOY A;  3LJU X;  2YVR A;  5TDR A;  1DVP A;  2KWJ A;  5H1T A;  2MKE A;  1N87 A;  4R7E A;  4P5O B;  1WEE A;  3O34 A;  2M85 A;  5KH7 A;  3O33 A;  2CRR A;  2MD7 B;  2XOZ A;  1T1H A;  4AYC A;  3ZNI A;  4MVT A;  3HCS A;  5B8D A;  2PUY A;  5LKZ A;  1IYM A;  2E6R A;  2LXH C;  3SOX A;  4O64 A;  1WIM A;  2LGG A;  3JUE A;  1E4U A;  3LRQ A;  2VP7 A;  3N9Q A;  3ZPV E;  2LDR A;  4S3O B;  2LN0 A;  4R2Y A;  1LDK C;  2YUC A;  4IC2 A;  4NN2 A;  3NG2 A;  3O37 A;  2DX8 A;  5FB0 A;  2LGK A;  1WEN A;  3O35 A;  3QZV A;  2LGV A;  2EXU A;  4C9Z A;  2I50 A;  3HTK C;  1Z6U A;  1WEQ A;  4O62 A;  3SHB A;  4YAT A;  2YQL A;  2VNF A;  5LKU A;  1MBM A;  1WEU A;  2XP0 A;  4LAD B;  2VPB A;  4WA6 A;  2YRE A;  2K1J A;  4QF2 A;  3EB5 A;  1CHC A;  5SVX A;  1RMD A;  3L1X A;  4LLB A;  2B0O E;  2G45 A;  2D8U A;  2LV9 A;  2KFT A;  3N9P A;  3GV4 A;  4OGC A;  3ASL A;  3N9L A;  2RI7 A;  2EGM A;  4OGE A;  2L80 A;  5SVI A;  3DPL R;  3HCT A;  1VFY A;  4A0C D;  2YUR A;  2K4D A;  3MHH A;  5DIN A;  4LKA A;  4XI1 A;  2H0D A;  3RPG C;  3LQH A;  2G43 A;  3N9O A;  4A4C A;  3SUB A;  2QJ0 A;  3M62 A;  2ECJ A;  2M3H A;  2VJE B;  2MD8 C;  2FFW A;  3MDB C;  5TDW A;  2KIZ A;  5AIT A;  2CKL A;  3EB6 A;  1WEV A;  3O36 A;  1JM7 B;  5G05 B;  2K16 A;  4IC3 A;  2MUM A;  2KR4 A;  3LQJ A;  3L11 A;  4UP5 A;  1WES A;  2ECI A;  4WZ2 A;  2KWN A;  2YSJ A;  2LGL A;  3H7H A;  2CON A;  4PTB A;  5K3Q A;  1FP0 A;  3FM8 C;  5LKX A;  4YBM A;  1Z60 A;  2VJF B;  4PPE A;  2Y1M A;  4ZUX U;  3O70 A;  2F6J A;  2CT2 A;  2JMD A;  5EYA F;  4B7Y C;  4X3G A;  5D1L B;  5TAB A;  1JOC A;  2KRE A;  2DSM A;  4B86 C;  3T7L A;  2CSV A;  2IDA A;  5JG6 A;  2MNY A;  2RR4 A;  4GNF A;  5H1U A;  2M13 A;  2FUU A;  4YBS A;  1MM3 A;  2M1R A;  2QIC A;  2JRJ A;  4YC9 A;  3N9M A;  3ZVZ B;  3SOU A;  4LJN A;  2FD4 A;  4TKP B;  1VD4 A;  3ZVY A;  2ECN A;  5D1M B;  4FO9 A;  1WE9 A;  3KDE C;  1BOR A;  2C2L A;  3M63 A;  5FEY A;  1Z2Q A;  3ZPV 1;  4MSX A;  3N9N A;  2JUN A;  1WEM A;  4L7X A;  3FAN A;  1LDJ B;  2ECG A;  5SVY A;  4V3K C;  2LXP C;  2YW8 A;  2ECW A;  5DKA A;  2JM3 A;  5KH9 A;  2RSD A;  3KNV A;  3LQI A;  1WEP A;  3T9K A;  3PHD A;  2XEU A;  4BHW A;  4CCG X;  3RPG B;  3U5N A;  4YBT A;  4R8P K;  2KYU A;  5D1K B;  4AYC B;  3PLW A;  4AUQ B;  2YYR A;  3SOW A;  2ECT A;  1WGM A;  2EGP A;  2KKX A;  3FJU B;  1WFK A;  2YQM A;  3LDY A;  2OWA A;  4I7D A;  5B79 A;  2LQ6 A;  2E61 A;  2MA5 A;  4FJC A;  2VPE A;  2JMI A;  3DQV R;  5C11 A;  5J3X A;  2CSY A;  2K17 A;  1MM2 A;  4FK5 A;  2AN6 A;  3C5K A;  2CRW A;  5H9M A;  3E2D A;  3MHS A;  2YT5 A;  4FIP A;  1FBV A;  2KWO A;  3M99 A;  4UP0 A;  1X4J A;  3KV5 A;  2KU3 A;  2XB1 A;  3ZYQ A;  4CA1 A;  3VK6 A;  4F52 B;  3KV6 A;  2UZG A;  3O47 A;  4YAB A;  2MT5 A;  2F6N A;  2HDP A;  3L1Z B;  3I2D A;  1V87 A;  2BAY A;  2EOD A;  4BBQ A;  2JMJ A;  2HYE D;  4ZQL A;  2P57 A;  3KQI A;  2KKY A;  4UI9 B;  3C6W A;  5B75 A;  4A49 A;  2XOC A;  2LAU A;  2YSM A;  3Q1D A;  5SVI B;  2L5U A;  2OXQ C;  1HYJ A;  2E6S A;  2C2V S;  2M6M A;  5KH3 A;  2H0D B;  4V3L C;  5H1V A;  5C13 A;  4ZDT A;  2FSA A;  4Z0R A;  2VJE A;  4GB0 A;  4LK9 A;  2MIQ A;  1XWH A;  4AP4 A;  1VYX A;  3U5M A;  1HYI A;  4N4F A;  1JM7 A;  1X4U A;  3IHP A;  2CKL B;  4S3O C;  2MNZ A;  3ZTG A;  3LVR E;  4QQ4 A;  1X4I A;  5TRB A;  3O7A A;  2YHN A;  2L0B A;  2Y1N A;  2YHO A;  3V43 A;  2VPD A;  3U5O A;  4AVX A;  1WEW A;  1WEO A;  2L7P A;  3FAO A;  2DJA A;  2VJF A;  3T6R A;  4WZ0 A;  1U6G B;  3FL2 A;  1K2F A;  2NAA A;  4GNE A;  3PUR A;  4N3W A;  5B78 A;  4GNG A;  5FER A;  2MA6 A;  3U5P A;  4WZ3 B;  5B77 A;  2KGI A;  5B76 A;  3FEH A;  2YU4 A;  4YAX A;  4F1P A;  4Q6F A;  5AIU A;  2ECV A;  2D8S A;  1WIL A;  2IQJ A;  2L75 A;  4L58 A;  2F42 A;  2PNX A;  5FB1 A;  2ZET C;  5LKT A;  2Y43 A;  2LRI C; 
#chains in the Genus database with same CATH homology
 2CRR A;  5SVX A;  2RR4 A;  2XOZ A;  3LVR E;  2B0O E;  3DWD A;  4QQ4 A;  2D8U A;  2EXU A;  3DDT A;  2JUN A;  3SUB A;  3PLW A;  2M13 A;  4Z0R A;  3FEH A;  3M7K A;  4F1P A;  2XOY A;  3JUE A;  2CRW A;  3LJU X;  4OGC A;  5SVY A;  4H9D A;  2P57 A;  2YVR A;  3E2D A;  2KKX A;  1DCQ A;  2KKY A;  3FJU B;  2FD4 A;  4O62 A;  2EGM A;  2FFW A;  3H7H A;  3MDB C;  4Z0O A;  2CON A;  2JM3 A;  2MKE A;  4OGE A;  5K3Q A;  2L7P A;  2IQJ A;  2DJA A;  2XOC A;  5SVI A;  2OWA A;  2LAU A;  3FM8 C;  3LDY A;  3Q1D A;  5SVI B;  2CSV A;  2XP0 A;  3T9K A;  2E61 A;  3KDE C;  2YRE A;  3LVQ E;  3O47 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...