2XP0A

C-terminal cysteine-rich domain of human chfr
Total Genus 64
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
64
sequence length
239
structure length
212
Chain Sequence
PYVVCRQCPEYRRQAAQPPHCPDYVCPLQGSHALCTCCFQPMPDRRVEREQDPRVAPQQCAVCLQPFCHLYWGCTRTGCYGCLAPFCELNLGDKCLDGVLNNNSYESDILKNYLATRGLTWKNMLTESLVALQRGVFLLSDYRVTGDTVLCYCCGLRSFRELTYQYRQNIPASELPVAVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQTRF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Ligase
source organism Homo sapiens
publication title Structural Basis of Poly(Adp-Ribose) Recognition by the Multizinc Binding Domain of Checkpoint with Forkhead-Associated and Ring Domains (Chfr).
pubmed doi rcsb
molecule keywords E3 UBIQUITIN-PROTEIN LIGASE CHFR
total genus 64
structure length 212
sequence length 239
chains with identical sequence B
ec nomenclature ec 2.3.2.27: RING-type E3 ubiquitin transferase.
pdb deposition date 2010-08-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF10283 zf-CCHH PBZ domain
A PF17979 zf-CRD Cysteine rich domain with multizinc binding regions
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.40.140 Alpha Beta 2-Layer Sandwich Herpes Virus-1 Herpes Virus-1 2xp0A01
2XOZA 2XP0A 2XOYA 2XOCA
chains in the Genus database with same CATH superfamily
3LQJA 2C2LA 1MBMA 2H0DA 3LJUX 2QICA 4F1PA 5LKXA 3RPGC 5D1KB 3PURA 2XB1A 5JG6A 4FJCA 2AN6A 2Y43A 3FJUB 4GB0A 1X4JA 3ZPV1 3LDYA 3IHPA 4WZ0A 2VJFB 5SVYA 4AUQB 5B79A 5D1MB 2IDAA 5SVIB 4UI9B 2YQLA 4NN2A 1RMDA 3L1ZB 4BBQA 2CKLA 1N87A 4OGCA 2VPGA 4ZUXU 3O33A 2LRIC 2MUMA 5LKTA 2M3HA 5B76A 3T6RA 2KIZA 3NG2A 1JM7A 3KV6A 5LCWB 5AIUA 2Y1MA 1LDJB 2FD4A 5G05B 5B8DA 4LJNA 4AYCA 2DSMA 3N9OA 4MVTA 4W4UA 2LDRA 2KWKA 2L0BA 3GL6A 5D1LB 3O47A 5FB0A 2KREA 2K17A 4Q6FA 4IC2A 3KNVA 2G6QA 1WEPA 4Z0OA 3T9KA 5KH3A 5TDWA 4YAXA 2RSDA 2FUUA 1JOCA 4LADB 2CRRA 2DJAA 4X3GA 2HDPA 2CSVA 4WZ3B 2VPEA 4GNGA 3V43A 3PUQA 4LKAA 4MSXA 2DX8A 3N9QA 5KH7A 4C9ZA 2ECJA 2YW8A 3C5KA 2VJFA 1MM3A 2CONA 4LLBA 2CRWA 3U5NA 2XOCA 2YSJA 1Z60A 2LGGA 2YHNA 1DCQA 2E61A 2JUNA 2VPBA 2YREA 3N9NA 3LQIA 3PLWA 4YADA 5TBNA 3U5PA 3ZTGA 2YYRA 1WENA 4B86C 3RTRB 3O37A 4GNEA 2B0OE 2LAUA 3M63A 2FSAA 1X4UA 4BHWA 4TKPB 3U5MA 2KFTA 5H1VA 2CSYA 2KGIA 3PHDA 1HYJA 2JM3A 2K16A 5DINA 3KQIA 4A4CA 4F52B 1WILA 2F6NA 1T1HA 2YQMA 3DQVR 4FO9A 1BORA 5G04B 4PTBA 4S3OB 1VFYA 2MKEA 2BAYA 1FBVA 1FP0A 2VNFA 2MA5A 2D8UA 4YABA 3I2DA 5FERA 2ECIA 4YC9A 4O62A 3SUBA 3N9LA 5C13A 2E6SA 5H1TA 2F6JA 2YU4A 3MDBC 4V3LC 4GNDA 2ECVA 4O64A 3SOXA 2ECWA 1K2FA 2KGGA 4L58A 2MD7B 3MHSA 5H1UA 2OXQC 2G45A 3HCUA 1WGMA 2YT5A 3JUEA 3N9PA 4I7CA 3C6WA 2KWJA 2L5UA 2EA6A 2RR4A 4A49A 2XOYA 4V3KC 2MNZA 1DVPA 2M85A 2YVRA 2ZETC 1X4IA 4L7XA 2HYED 3GV4A 2C2VS 2FFWA 1WEVA 2YSMA 1WEEA 2XEUA 2M1RA 5TABA 3DPLR 2YUCA 4A4BA 1G25A 1VD4A 4R2YA 1Z6UA 1V87A 1WE9A 3EB6A 4FK5A 5I3LA 4S3OC 2VP7A 3O35A 3SOWA 3ZYQA 3FEHA 4PPEA 2MNYA 4ZDTA 3L1XA 5C11A 3KDEC 3Q1DA 4I7DA 4N4FA 3LRQA 2MD8C 2L7PA 3FL2A 1XWHA 4P5OB 5SVIA 2VJEB 2RI7A 4Z0RA 3ZNIA 4R8PK 5B77A 4YBMA 5TRBA 4AYCB 2I50A 2P57A 2MT5A 2LGVA 2ECGA 4YATA 2VPDA 2QJ0A 2KWNA 4H9DA 2EGMA 1WEMA 3H7HA 5G0FA 2CSZA 2JMDA 1ZBDB 1HYIA 3M62A 2KWOA 4UP0A 2KKXA 2OWAA 2YHOA 1U6GB 2PUYA 4WZ2A 2JMJA 2MA6A 2L80A 2JMIA 2ECTA 5H9MA 3HCSA 4QF2A 2XP0A 2EODA 2M6MA 4AVXA 2LXPC 2NAAA 4LK9A 2LQ6A 2LGKA 3FM8C 4WA6A 2QIZA 5K3QA 2KU3A 4CCGX 3O7AA 1WEWA 5LKUA 5FEYA 5TDRA 1Z2QA 1MM2A 4OGEA 4QQ4A 3EB5A 4FIPA 1IYMA 1WFKA 2KE1A 2XOZA 5SVXA 2L43A 2UZGA 2VJEA 2EXUA 3QZVA 2IQJA 2CT2A 3O70A 2K4DA 2KKYA 3MHHA 4I7BA 4GNFA 1LDKC 4UP5A 3KV5A 3T7LA 4XI1A 2H0DB 3DWDA 3LVRE 3N9MA 4A0CD 3U5OA 2LXHC 4B7YC 4R7EA 3ZVYA 2K1JA 5J3XA 3ZVZB 3RPGB 1WEUA 1WIMA 2M13A 5B78A 2LN0A 2L75A 2PNXA 3SHBA 3HTKC 2KYUA 5EYAF 2D8SA 2FUIA 2G43A 3M99A 2CKLB 2E6RA 1WEQA 2LV9A 5KH9A 4QF3A 1E4UA 3E2DA 5B75A 1JM7B 5DKAA 2Y1NA 2KR4A 3FAOA 3HCTA 5LKZA 1WEOA 4ZQLA 3DDTA 4AP4A 2YURA 5FB1A 2LGLA 3O36A 2JRJA 3LQHA 4CA1A 3M7KA 2MIQA 4YBTA 4N3WA 5AITA 3SOUA 3ASLA 3FANA 1WESA 4YBSA 3ZPVE 3O34A 1F62A 1VYXA 3VK6A 3LVQE 3L11A 2EGPA 1CHCA 2F42A 2ECNA 4IC3A
chains in the Genus database with same CATH topology
2FFWA 2B0OE 2LAUA 3H7HA 3DWDA 4OGEA 5SVIB 3LVRE 2CRWA 3LJUX 4QQ4A 2XP0A 3KDEC 2XOCA 3M7KA 2CSVA 4F1PA 2XOZA 2L7PA 3O47A 5SVIA 5SVXA 2MKEA 4OGCA 4Z0RA 1DCQA 3E2DA 2E61A 2D8UA 2JUNA 2EXUA 2JM3A 2IQJA 2YREA 3JUEA 4Z0OA 2KKXA 3T9KA 3FJUB 3FM8C 2OWAA 3LVQE 4O62A 2M13A 4H9DA 2KKYA 3DDTA 3LDYA 3SUBA 5K3QA 2P57A 2RR4A 2XOYA 5SVYA 2CRRA 2FD4A 3PLWA 2YVRA 3FEHA 2CONA 2DJAA 3MDBC 2EGMA 3Q1DA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2XOZ A;  2XP0 A;  2XOY A;  2XOC A; 
#chains in the Genus database with same CATH topology
 3LQJ A;  2C2L A;  1MBM A;  2H0D A;  3LJU X;  2QIC A;  4F1P A;  5LKX A;  3RPG C;  5D1K B;  3PUR A;  2XB1 A;  5JG6 A;  4FJC A;  2AN6 A;  2Y43 A;  3FJU B;  4GB0 A;  1X4J A;  3ZPV 1;  3LDY A;  3IHP A;  4WZ0 A;  2VJF B;  5SVY A;  4AUQ B;  5B79 A;  5D1M B;  2IDA A;  5SVI B;  4UI9 B;  2YQL A;  4NN2 A;  1RMD A;  3L1Z B;  4BBQ A;  2CKL A;  1N87 A;  4OGC A;  2VPG A;  4ZUX U;  3O33 A;  2LRI C;  2MUM A;  5LKT A;  2M3H A;  5B76 A;  3T6R A;  2KIZ A;  3NG2 A;  1JM7 A;  3KV6 A;  5LCW B;  5AIU A;  2Y1M A;  1LDJ B;  2FD4 A;  5G05 B;  5B8D A;  4LJN A;  4AYC A;  2DSM A;  3N9O A;  4MVT A;  4W4U A;  2LDR A;  2KWK A;  2L0B A;  3GL6 A;  5D1L B;  3O47 A;  5FB0 A;  2KRE A;  2K17 A;  4Q6F A;  4IC2 A;  3KNV A;  2G6Q A;  1WEP A;  4Z0O A;  3T9K A;  5KH3 A;  5TDW A;  4YAX A;  2RSD A;  2FUU A;  1JOC A;  4LAD B;  2CRR A;  2DJA A;  4X3G A;  2HDP A;  2CSV A;  4WZ3 B;  2VPE A;  4GNG A;  3V43 A;  3PUQ A;  4LKA A;  4MSX A;  2DX8 A;  3N9Q A;  5KH7 A;  4C9Z A;  2ECJ A;  2YW8 A;  3C5K A;  2VJF A;  1MM3 A;  2CON A;  4LLB A;  2CRW A;  3U5N A;  2XOC A;  2YSJ A;  1Z60 A;  2LGG A;  2YHN A;  1DCQ A;  2E61 A;  2JUN A;  2VPB A;  2YRE A;  3N9N A;  3LQI A;  3PLW A;  4YAD A;  5TBN A;  3U5P A;  3ZTG A;  2YYR A;  1WEN A;  4B86 C;  3RTR B;  3O37 A;  4GNE A;  2B0O E;  2LAU A;  3M63 A;  2FSA A;  1X4U A;  4BHW A;  4TKP B;  3U5M A;  2KFT A;  5H1V A;  2CSY A;  2KGI A;  3PHD A;  1HYJ A;  2JM3 A;  2K16 A;  5DIN A;  3KQI A;  4A4C A;  4F52 B;  1WIL A;  2F6N A;  1T1H A;  2YQM A;  3DQV R;  4FO9 A;  1BOR A;  5G04 B;  4PTB A;  4S3O B;  1VFY A;  2MKE A;  2BAY A;  1FBV A;  1FP0 A;  2VNF A;  2MA5 A;  2D8U A;  4YAB A;  3I2D A;  5FER A;  2ECI A;  4YC9 A;  4O62 A;  3SUB A;  3N9L A;  5C13 A;  2E6S A;  5H1T A;  2F6J A;  2YU4 A;  3MDB C;  4V3L C;  4GND A;  2ECV A;  4O64 A;  3SOX A;  2ECW A;  1K2F A;  2KGG A;  4L58 A;  2MD7 B;  3MHS A;  5H1U A;  2OXQ C;  2G45 A;  3HCU A;  1WGM A;  2YT5 A;  3JUE A;  3N9P A;  4I7C A;  3C6W A;  2KWJ A;  2L5U A;  2EA6 A;  2RR4 A;  4A49 A;  2XOY A;  4V3K C;  2MNZ A;  1DVP A;  2M85 A;  2YVR A;  2ZET C;  1X4I A;  4L7X A;  2HYE D;  3GV4 A;  2C2V S;  2FFW A;  1WEV A;  2YSM A;  1WEE A;  2XEU A;  2M1R A;  5TAB A;  3DPL R;  2YUC A;  4A4B A;  1G25 A;  1VD4 A;  4R2Y A;  1Z6U A;  1V87 A;  1WE9 A;  3EB6 A;  4FK5 A;  5I3L A;  4S3O C;  2VP7 A;  3O35 A;  3SOW A;  3ZYQ A;  3FEH A;  4PPE A;  2MNY A;  4ZDT A;  3L1X A;  5C11 A;  3KDE C;  3Q1D A;  4I7D A;  4N4F A;  3LRQ A;  2MD8 C;  2L7P A;  3FL2 A;  1XWH A;  4P5O B;  5SVI A;  2VJE B;  2RI7 A;  4Z0R A;  3ZNI A;  4R8P K;  5B77 A;  4YBM A;  5TRB A;  4AYC B;  2I50 A;  2P57 A;  2MT5 A;  2LGV A;  2ECG A;  4YAT A;  2VPD A;  2QJ0 A;  2KWN A;  4H9D A;  2EGM A;  1WEM A;  3H7H A;  5G0F A;  2CSZ A;  2JMD A;  1ZBD B;  1HYI A;  3M62 A;  2KWO A;  4UP0 A;  2KKX A;  2OWA A;  2YHO A;  1U6G B;  2PUY A;  4WZ2 A;  2JMJ A;  2MA6 A;  2L80 A;  2JMI A;  2ECT A;  5H9M A;  3HCS A;  4QF2 A;  2XP0 A;  2EOD A;  2M6M A;  4AVX A;  2LXP C;  2NAA A;  4LK9 A;  2LQ6 A;  2LGK A;  3FM8 C;  4WA6 A;  2QIZ A;  5K3Q A;  2KU3 A;  4CCG X;  3O7A A;  1WEW A;  5LKU A;  5FEY A;  5TDR A;  1Z2Q A;  1MM2 A;  4OGE A;  4QQ4 A;  3EB5 A;  4FIP A;  1IYM A;  1WFK A;  2KE1 A;  2XOZ A;  5SVX A;  2L43 A;  2UZG A;  2VJE A;  2EXU A;  3QZV A;  2IQJ A;  2CT2 A;  3O70 A;  2K4D A;  2KKY A;  3MHH A;  4I7B A;  4GNF A;  1LDK C;  4UP5 A;  3KV5 A;  3T7L A;  4XI1 A;  2H0D B;  3DWD A;  3LVR E;  3N9M A;  4A0C D;  3U5O A;  2LXH C;  4B7Y C;  4R7E A;  3ZVY A;  2K1J A;  5J3X A;  3ZVZ B;  3RPG B;  1WEU A;  1WIM A;  2M13 A;  5B78 A;  2LN0 A;  2L75 A;  2PNX A;  3SHB A;  3HTK C;  2KYU A;  5EYA F;  2D8S A;  2FUI A;  2G43 A;  3M99 A;  2CKL B;  2E6R A;  1WEQ A;  2LV9 A;  5KH9 A;  4QF3 A;  1E4U A;  3E2D A;  5B75 A;  1JM7 B;  5DKA A;  2Y1N A;  2KR4 A;  3FAO A;  3HCT A;  5LKZ A;  1WEO A;  4ZQL A;  3DDT A;  4AP4 A;  2YUR A;  5FB1 A;  2LGL A;  3O36 A;  2JRJ A;  3LQH A;  4CA1 A;  3M7K A;  2MIQ A;  4YBT A;  4N3W A;  5AIT A;  3SOU A;  3ASL A;  3FAN A;  1WES A;  4YBS A;  3ZPV E;  3O34 A;  1F62 A;  1VYX A;  3VK6 A;  3LVQ E;  3L11 A;  2EGP A;  1CHC A;  2F42 A;  2ECN A;  4IC3 A; 
#chains in the Genus database with same CATH homology
 2FFW A;  2B0O E;  2LAU A;  3H7H A;  3DWD A;  4OGE A;  5SVI B;  3LVR E;  2CRW A;  3LJU X;  4QQ4 A;  2XP0 A;  3KDE C;  2XOC A;  3M7K A;  2CSV A;  4F1P A;  2XOZ A;  2L7P A;  3O47 A;  5SVI A;  5SVX A;  2MKE A;  4OGC A;  4Z0R A;  1DCQ A;  3E2D A;  2E61 A;  2D8U A;  2JUN A;  2EXU A;  2JM3 A;  2IQJ A;  2YRE A;  3JUE A;  4Z0O A;  2KKX A;  3T9K A;  3FJU B;  3FM8 C;  2OWA A;  3LVQ E;  4O62 A;  2M13 A;  4H9D A;  2KKY A;  3DDT A;  3LDY A;  3SUB A;  5K3Q A;  2P57 A;  2RR4 A;  2XOY A;  5SVY A;  2CRR A;  2FD4 A;  3PLW A;  2YVR A;  3FEH A;  2CON A;  2DJA A;  3MDB C;  2EGM A;  3Q1D A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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