3M62A

Crystal structure of ufd2 in complex with the ubiquitin-like (ubl) domain of rad23
Total Genus 368
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
368
sequence length
961
structure length
955
Chain Sequence
SPEFRSMTAIEDILQITTDPSDTRGYSLLKSEEVPQGSTLGVDFIDTLLLYQLTENEKLDKPFEYLNDCFRRNQQQKRITKNKPNAESLHSTFQEIDRLVIGYGVVALQIENFCMNGAFINYITGIVSNVNSYTDFLSQIIQRAILEGTALDLLNAVFPTLLEYCNKHVSHFDLNESVIYNNVLTIFELFVTFKPIAEIFTKIDGFFADYSCKPQDFERKTILGPILSLSPIEAAVAIRNYGDNLLRSKQQTAMIHESLQAEHKVVIDRLFFIVDKLVRGSLNSRTDMISYFAHIANKNHLRRADHPPFKELSSNGFMSNITLLLVRFSQPFLDISYKKIDKIDANYFNNPSLFIDLSGETRLNSDFKEADAFYDKNRKTADSKPNFISDCFFLTLTYLHYGLGGTLSFEEKMGSEIKALKEEIEKVKKIAANHDVFARFITAQLSKMEKALKTTESLRFALQGFFAHRSLQLEVFDFICGASTFLIRVVDPEHEFPFKQIKLPLIPDQIVDNADFLRAHAPVPFKYYPEFVVEGPVNYSLYISKYQTSPIFRNPRLGSFVEFTTMVLRCPELVSNPHLKGKLVQLLSVGAMPLTDNSPGFMMDIFEHDELVNKNLLYALLDFYVIVEKTGSSSQFYDKFNSRYSISIILEELYYKIPSYKNQLIWQSQNNADFFVRFVARMLNDLTFLLDEGLSNLAEVHNIQNELDNRARGAPREEEDKELQTRLASASRQAKSSCGLADKSMKLFEIYSKDIPAAFVTPEIVYRLASMLNYNLESLVGPKCGELKVKDPQSYSFNPKDLLKALTTVYINLSEQSEFISAVAKDERSFNRNLFVRAVDILGRKTGLASPEFIEKLLNFANKAEEQRKADEEEDLEYGDVPDEFLDPLMYTIMKDPVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDVTPNEELRQKILCFKKQKKEEA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title The yeast E4 ubiquitin ligase Ufd2 interacts with the ubiquitin-like domains of Rad23 and Dsk2 via a novel and distinct ubiquitin-like binding domain.
pubmed doi rcsb
molecule tags Ligase/protein binding
source organism Saccharomyces cerevisiae
molecule keywords Ubiquitin conjugation factor E4
total genus 368
structure length 955
sequence length 961
ec nomenclature ec 2.3.2.27: RING-type E3 ubiquitin transferase.
pdb deposition date 2010-03-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF04564 U-box U-box domain
A PF10408 Ufd2P_core Ubiquitin elongating factor core
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.40.10 Alpha Beta 2-Layer Sandwich Herpes Virus-1 Zinc/RING finger domain, C3HC4 (zinc finger) 3m62A02
2VPDA 4F52B 4A49A 5G05B 5B77A 3ZPV1 3GL6A 3N9QA 2MD8C 4B86C 3N9LA 4N4FA 2E6RA 2LGKA 2M3HA 4A0CD 4B7YC 3O35A 4W4UA 2M1RA 4YABA 3L1XA 2KWOA 5TDRA 5FB0A 3N9PA 5G0FA 2YQLA 2LV9A 3MHSA 3KNVA 2LN0A 2FUUA 2YU4A 5LKUA 2AN6A 3KV5A 2E6SA 1FBVA 1LDJB 3ZTGA 5B79A 1Z60A 2JMIA 2LGVA 1WEOA 4C9ZA 1WEMA 4AP4A 3ZVYA 2VJFB 2YW8A 2M6MA 3PHDA 1RMDA 1X4IA 2MA5A 3N9NA 3ZNIA 2KFTA 2HDPA 2LDRA 4LLBA 1WEPA 2ECIA 3O70A 2YHNA 2KIZA 2JMJA 2PUYA 1E4UA 3RTRB 2G45A 3HCUA 2KYUA 4X3GA 3M62A 1VYXA 3N9MA 2Y1MA 4YADA 5TDWA 1V87A 3L1ZB 2EODA 5D1KB 4UI9B 1JOCA 1WFKA 2QJ0A 2KWNA 1VFYA 2L75A 1G25A 2LGGA 2KREA 4YBSA 2YT5A 4WA6A 5G04B 4O64A 5H1TA 2VPBA 2YQMA 4Q6FA 4UP0A 2VPGA 2CSZA 3N9OA 2D8SA 1BORA 2QIZA 2LQ6A 4V3KC 5B75A 4GB0A 3LQIA 5FEYA 2KE1A 2RI7A 1VD4A 2IDAA 2OXQC 5AIUA 2LGLA 3M99A 2ECJA 4PPEA 3GV4A 4FJCA 2RSDA 2F6JA 4QF2A 2BAYA 2H0DA 2YHOA 5J3XA 5H9MA 5KH3A 3DPLR 1IYMA 4ZDTA 3U5MA 3L11A 1WEQA 2YUCA 3SOWA 4L7XA 2G6QA 5FB1A 4V3LC 3O36A 5EYAF 3QZVA 4CCGX 2K4DA 5DINA 4GNGA 2CKLA 2MD7B 4R8PK 2KR4A 2YURA 2VPEA 1WGMA 4YC9A 4YATA 4GNDA 1FP0A 2HYED 2JRJA 4ZQLA 4A4CA 1CHCA 4GNEA 2VP7A 4YBTA 1WENA 2ECVA 3NG2A 3KV6A 2FUIA 4FO9A 2Y1NA 2DX8A 3C6WA 1N87A 4IC3A 5B76A 4NN2A 1JM7A 4BBQA 2EA6A 2F42A 2ECNA 5H1UA 3T7LA 3U5PA 2MT5A 4MVTA 1U6GB 2CSYA 4WZ0A 2PNXA 1K2FA 4UP5A 3FL2A 4S3OC 3V43A 3C5KA 2VJEA 1Z2QA 4WZ3B 5JG6A 4AYCA 5C11A 3EB5A 5TBNA 2L80A 2LXPC 3MHHA 3ZVZB 4S3OB 2YSJA 1MM3A 4AUQB 4YBMA 4N3WA 5TRBA 4PTBA 3O7AA 2C2LA 2CT2A 3KQIA 4FK5A 3PUQA 2C2VS 1LDKC 2JMDA 2XB1A 3EB6A 5LKZA 3O34A 5B8DA 4ZUXU 3O37A 1WILA 2MA6A 1HYJA 5LKXA 3ASLA 2YYRA 4LK9A 4YAXA 2G43A 4AVXA 5B78A 2MIQA 4LADB 5TABA 5LKTA 2L5UA 1WEEA 3U5NA 2MNZA 4I7CA 2KWJA 2K16A 2H0DB 2KWKA 2FSAA 1WESA 2ECTA 2NAAA 3LQJA 2L0BA 2VJFA 3HCTA 3T6RA 1XWHA 5C13A 2KU3A 3I2DA 5D1LB 1MM2A 2F6NA 3ZYQA 4I7DA 3LQHA 3M63A 1HYIA 2ECWA 5AITA 2XEUA 2ZETC 4A4BA 4LKAA 2Y43A 2YSMA 2CKLB 3SOXA 3VK6A 1WEVA 5DKAA 2KGIA 3PURA 1F62A 2LXHC 4WZ2A 3U5OA 5KH7A 3HCSA 4R7EA 5I3LA 4GNFA 2VNFA 1X4UA 4LJNA 4I7BA 2QICA 2M85A 2UZGA 4FIPA 4P5OB 1ZBDB 2MNYA 2MUMA 3IHPA 2LRIC 3O33A 1X4JA 1Z6UA 1JM7B 1WEWA 2EGPA 4XI1A 3LRQA 4BHWA 3RPGC 1WE9A 5H1VA 4TKPB 5FERA 1DVPA 2L43A 4R2YA 2K1JA 2KGGA 4L58A 4CA1A 3HTKC 3DQVR 3RPGB 1WIMA 4QF3A 2YREA 3ZPVE 2VJEB 2I50A 4MSXA 1WEUA 2K17A 5KH9A 4AYCB 2ECGA 5LCWB 3SOUA 3SHBA 1T1HA 4IC2A 5D1MB
chains in the Genus database with same CATH superfamily
2VPDA 4F52B 2E61A 4A49A 5G05B 2CRWA 5B77A 3ZPV1 3GL6A 3N9QA 2MD8C 2XOCA 3M7KA 4B86C 3N9LA 4N4FA 2E6RA 2JUNA 2LGKA 2M3HA 3DDTA 4A0CD 3T9KA 4B7YC 3O35A 4W4UA 2KKYA 2M1RA 4YABA 3L1XA 2KWOA 5TDRA 5FB0A 3N9PA 5SVIA 5G0FA 2YQLA 2LV9A 3MHSA 3KNVA 2LN0A 2FUUA 2YU4A 5LKUA 2AN6A 3KV5A 2E6SA 1FBVA 1LDJB 3ZTGA 5B79A 3MDBC 1Z60A 2JMIA 2LGVA 1WEOA 4C9ZA 1WEMA 4AP4A 3ZVYA 2VJFB 2YW8A 2M6MA 3PHDA 1RMDA 1X4IA 3LDYA 2MA5A 2M13A 3N9NA 3ZNIA 2KFTA 2HDPA 2LDRA 4LLBA 1WEPA 2ECIA 3O70A 2YHNA 2KIZA 2JMJA 3FANA 2PUYA 1E4UA 3RTRB 2G45A 3HCUA 2KYUA 4X3GA 4Z0RA 3M62A 1VYXA 3N9MA 2Y1MA 4YADA 5TDWA 1V87A 3L1ZB 2EGMA 2EODA 5D1KB 4UI9B 1JOCA 1WFKA 2QJ0A 2KWNA 1VFYA 2L75A 1G25A 2LGGA 2KREA 4YBSA 5SVYA 2YT5A 4WA6A 3E2DA 3O47A 4O64A 5G04B 5H1TA 5K3QA 2VPBA 2YQMA 4Q6FA 4UP0A 2VPGA 2CSZA 3N9OA 2D8SA 1BORA 2QIZA 2LQ6A 4V3KC 5B75A 4GB0A 3LQIA 3FJUB 5FEYA 2B0OE 2KE1A 2RI7A 1VD4A 2IDAA 2OXQC 5AIUA 2LGLA 3M99A 2ECJA 4PPEA 3GV4A 4FJCA 3H7HA 2RSDA 2F6JA 4QF2A 2BAYA 2H0DA 2YHOA 5J3XA 5H9MA 5KH3A 3DPLR 1IYMA 2IQJA 4ZDTA 3U5MA 3L11A 1WEQA 2YUCA 3SOWA 2XP0A 4L7XA 2G6QA 5FB1A 4V3LC 3O36A 5EYAF 3QZVA 4CCGX 2K4DA 5DINA 4GNGA 2CKLA 2MD7B 4R8PK 2KR4A 2YURA 2JM3A 1MBMA 2VPEA 1WGMA 4YC9A 4YATA 5SVIB 4GNDA 1FP0A 2HYED 2JRJA 2P57A 4ZQLA 3LVQE 4A4CA 2MKEA 1CHCA 4GNEA 2VP7A 4YBTA 1WENA 2ECVA 3NG2A 3KV6A 2FUIA 4FO9A 2Y1NA 2DX8A 3C6WA 1N87A 4IC3A 5B76A 4NN2A 1JM7A 4BBQA 2D8UA 2EA6A 2F42A 2ECNA 5H1UA 2XOYA 3T7LA 3U5PA 2MT5A 4MVTA 1U6GB 2CSYA 2OWAA 4WZ0A 2PNXA 1K2FA 4UP5A 2DJAA 3FL2A 4S3OC 3V43A 3C5KA 2VJEA 1Z2QA 4WZ3B 5JG6A 3DWDA 4AYCA 5C11A 3FEHA 3EB5A 4F1PA 5TBNA 2L80A 2LXPC 3MHHA 3ZVZB 2CSVA 2YSJA 4S3OB 1MM3A 4AUQB 4YBMA 3JUEA 4N3WA 2XOZA 5TRBA 4PTBA 3Q1DA 3O7AA 2C2LA 2CT2A 3KQIA 4FK5A 3PUQA 2C2VS 3KDEC 1LDKC 2JMDA 2XB1A 3EB6A 5LKZA 3O34A 5B8DA 4ZUXU 3FM8C 3O37A 1WILA 2MA6A 1HYJA 2YVRA 4Z0OA 5LKXA 3ASLA 2YYRA 4LK9A 4YAXA 2G43A 4AVXA 5SVXA 5B78A 2MIQA 4LADB 5TABA 5LKTA 2L5UA 1WEEA 3LJUX 3U5NA 2MNZA 4I7CA 2KWJA 2KKXA 2K16A 2H0DB 2KWKA 2FSAA 1WESA 2ECTA 2NAAA 3LQJA 2L0BA 2VJFA 3HCTA 3T6RA 1XWHA 4QQ4A 5C13A 2KU3A 3I2DA 5D1LB 1MM2A 2F6NA 3ZYQA 4I7DA 3LQHA 3M63A 1HYIA 2ECWA 3FAOA 4OGCA 5AITA 2XEUA 2ZETC 4H9DA 4A4BA 4LKAA 2Y43A 2YSMA 2CKLB 3SOXA 3VK6A 1WEVA 2FD4A 2KGIA 3PURA 4OGEA 5DKAA 1F62A 2LXHC 2DSMA 2EXUA 4WZ2A 3U5OA 5KH7A 3PLWA 3HCSA 4R7EA 5I3LA 4GNFA 2VNFA 1X4UA 4LJNA 2L7PA 2LAUA 4O62A 4I7BA 2QICA 2M85A 2UZGA 4FIPA 2CONA 4P5OB 1ZBDB 2MNYA 2MUMA 3IHPA 1DCQA 2LRIC 3O33A 1X4JA 1Z6UA 1JM7B 1WEWA 2EGPA 4XI1A 3LRQA 4BHWA 3RPGC 1WE9A 5H1VA 4TKPB 5FERA 1DVPA 2L43A 4R2YA 2K1JA 2KGGA 4L58A 4CA1A 2FFWA 3HTKC 3DQVR 3RPGB 1WIMA 2CRRA 4QF3A 3SUBA 2YREA 3LVRE 3ZPVE 2VJEB 4MSXA 2I50A 1WEUA 2K17A 5KH9A 4AYCB 2ECGA 5LCWB 3SOUA 3SHBA 1T1HA 4IC2A 5D1MB 2RR4A
chains in the Genus database with same CATH topology
2VPDA 4F52B 4A49A 5G05B 5B77A 3ZPV1 3GL6A 3N9QA 2MD8C 4B86C 3N9LA 4N4FA 2E6RA 2LGKA 2M3HA 4A0CD 4B7YC 3O35A 4W4UA 2M1RA 4YABA 3L1XA 2KWOA 5TDRA 5FB0A 3N9PA 5G0FA 2YQLA 2LV9A 3MHSA 3KNVA 2LN0A 2FUUA 2YU4A 5LKUA 2AN6A 3KV5A 2E6SA 1FBVA 1LDJB 3ZTGA 5B79A 1Z60A 2JMIA 2LGVA 1WEOA 4C9ZA 1WEMA 4AP4A 3ZVYA 2VJFB 2YW8A 2M6MA 3PHDA 1RMDA 1X4IA 2MA5A 3N9NA 3ZNIA 2KFTA 2HDPA 2LDRA 4LLBA 1WEPA 2ECIA 3O70A 2YHNA 2KIZA 2JMJA 2PUYA 1E4UA 3RTRB 2G45A 3HCUA 2KYUA 4X3GA 3M62A 1VYXA 3N9MA 2Y1MA 4YADA 5TDWA 1V87A 3L1ZB 2EODA 5D1KB 4UI9B 1JOCA 1WFKA 2QJ0A 2KWNA 1VFYA 2L75A 1G25A 2LGGA 2KREA 4YBSA 2YT5A 4WA6A 5G04B 4O64A 5H1TA 2VPBA 2YQMA 4Q6FA 4UP0A 2VPGA 2CSZA 3N9OA 2D8SA 1BORA 2QIZA 2LQ6A 4V3KC 5B75A 4GB0A 3LQIA 5FEYA 2KE1A 2RI7A 1VD4A 2IDAA 2OXQC 5AIUA 2LGLA 3M99A 2ECJA 4PPEA 3GV4A 4FJCA 2RSDA 2F6JA 4QF2A 2BAYA 2H0DA 2YHOA 5J3XA 5H9MA 5KH3A 3DPLR 1IYMA 4ZDTA 3U5MA 3L11A 1WEQA 2YUCA 3SOWA 4L7XA 2G6QA 5FB1A 4V3LC 3O36A 5EYAF 3QZVA 4CCGX 2K4DA 5DINA 4GNGA 2CKLA 2MD7B 4R8PK 2KR4A 2YURA 2VPEA 1WGMA 4YC9A 4YATA 4GNDA 1FP0A 2HYED 2JRJA 4ZQLA 4A4CA 1CHCA 4GNEA 2VP7A 4YBTA 1WENA 2ECVA 3NG2A 3KV6A 2FUIA 4FO9A 2Y1NA 2DX8A 3C6WA 1N87A 4IC3A 5B76A 4NN2A 1JM7A 4BBQA 2EA6A 2F42A 2ECNA 5H1UA 3T7LA 3U5PA 2MT5A 4MVTA 1U6GB 2CSYA 4WZ0A 2PNXA 1K2FA 4UP5A 3FL2A 4S3OC 3V43A 3C5KA 2VJEA 1Z2QA 4WZ3B 5JG6A 4AYCA 5C11A 3EB5A 5TBNA 2L80A 2LXPC 3MHHA 3ZVZB 4S3OB 2YSJA 1MM3A 4AUQB 4YBMA 4N3WA 5TRBA 4PTBA 3O7AA 2C2LA 2CT2A 3KQIA 4FK5A 3PUQA 2C2VS 1LDKC 2JMDA 2XB1A 3EB6A 5LKZA 3O34A 5B8DA 4ZUXU 3O37A 1WILA 2MA6A 1HYJA 5LKXA 3ASLA 2YYRA 4LK9A 4YAXA 2G43A 4AVXA 5B78A 2MIQA 4LADB 5TABA 5LKTA 2L5UA 1WEEA 3U5NA 2MNZA 4I7CA 2KWJA 2K16A 2H0DB 2KWKA 2FSAA 1WESA 2ECTA 2NAAA 3LQJA 2L0BA 2VJFA 3HCTA 3T6RA 1XWHA 5C13A 2KU3A 3I2DA 5D1LB 1MM2A 2F6NA 3ZYQA 4I7DA 3LQHA 3M63A 1HYIA 2ECWA 5AITA 2XEUA 2ZETC 4A4BA 4LKAA 2Y43A 2YSMA 2CKLB 3SOXA 3VK6A 1WEVA 5DKAA 2KGIA 3PURA 1F62A 2LXHC 4WZ2A 3U5OA 5KH7A 3HCSA 4R7EA 5I3LA 4GNFA 2VNFA 1X4UA 4LJNA 4I7BA 2QICA 2M85A 2UZGA 4FIPA 4P5OB 1ZBDB 2MNYA 2MUMA 3IHPA 2LRIC 3O33A 1X4JA 1Z6UA 1JM7B 1WEWA 2EGPA 4XI1A 3LRQA 4BHWA 3RPGC 1WE9A 5H1VA 4TKPB 5FERA 1DVPA 2L43A 4R2YA 2K1JA 2KGGA 4L58A 4CA1A 3HTKC 3DQVR 3RPGB 1WIMA 4QF3A 2YREA 3ZPVE 2VJEB 2I50A 4MSXA 1WEUA 2K17A 5KH9A 4AYCB 2ECGA 5LCWB 3SOUA 3SHBA 1T1HA 4IC2A 5D1MB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2VPD A;  4F52 B;  4A49 A;  5G05 B;  5B77 A;  3ZPV 1;  3GL6 A;  3N9Q A;  2MD8 C;  4B86 C;  3N9L A;  4N4F A;  2E6R A;  2LGK A;  2M3H A;  4A0C D;  4B7Y C;  3O35 A;  4W4U A;  2M1R A;  4YAB A;  3L1X A;  2KWO A;  5TDR A;  5FB0 A;  3N9P A;  5G0F A;  2YQL A;  2LV9 A;  3MHS A;  3KNV A;  2LN0 A;  2FUU A;  2YU4 A;  5LKU A;  2AN6 A;  3KV5 A;  2E6S A;  1FBV A;  1LDJ B;  3ZTG A;  5B79 A;  1Z60 A;  2JMI A;  2LGV A;  1WEO A;  4C9Z A;  1WEM A;  4AP4 A;  3ZVY A;  2VJF B;  2YW8 A;  2M6M A;  3PHD A;  1RMD A;  1X4I A;  2MA5 A;  3N9N A;  3ZNI A;  2KFT A;  2HDP A;  2LDR A;  4LLB A;  1WEP A;  2ECI A;  3O70 A;  2YHN A;  2KIZ A;  2JMJ A;  2PUY A;  1E4U A;  3RTR B;  2G45 A;  3HCU A;  2KYU A;  4X3G A;  3M62 A;  1VYX A;  3N9M A;  2Y1M A;  4YAD A;  5TDW A;  1V87 A;  3L1Z B;  2EOD A;  5D1K B;  4UI9 B;  1JOC A;  1WFK A;  2QJ0 A;  2KWN A;  1VFY A;  2L75 A;  1G25 A;  2LGG A;  2KRE A;  4YBS A;  2YT5 A;  4WA6 A;  5G04 B;  4O64 A;  5H1T A;  2VPB A;  2YQM A;  4Q6F A;  4UP0 A;  2VPG A;  2CSZ A;  3N9O A;  2D8S A;  1BOR A;  2QIZ A;  2LQ6 A;  4V3K C;  5B75 A;  4GB0 A;  3LQI A;  5FEY A;  2KE1 A;  2RI7 A;  1VD4 A;  2IDA A;  2OXQ C;  5AIU A;  2LGL A;  3M99 A;  2ECJ A;  4PPE A;  3GV4 A;  4FJC A;  2RSD A;  2F6J A;  4QF2 A;  2BAY A;  2H0D A;  2YHO A;  5J3X A;  5H9M A;  5KH3 A;  3DPL R;  1IYM A;  4ZDT A;  3U5M A;  3L11 A;  1WEQ A;  2YUC A;  3SOW A;  4L7X A;  2G6Q A;  5FB1 A;  4V3L C;  3O36 A;  5EYA F;  3QZV A;  4CCG X;  2K4D A;  5DIN A;  4GNG A;  2CKL A;  2MD7 B;  4R8P K;  2KR4 A;  2YUR A;  2VPE A;  1WGM A;  4YC9 A;  4YAT A;  4GND A;  1FP0 A;  2HYE D;  2JRJ A;  4ZQL A;  4A4C A;  1CHC A;  4GNE A;  2VP7 A;  4YBT A;  1WEN A;  2ECV A;  3NG2 A;  3KV6 A;  2FUI A;  4FO9 A;  2Y1N A;  2DX8 A;  3C6W A;  1N87 A;  4IC3 A;  5B76 A;  4NN2 A;  1JM7 A;  4BBQ A;  2EA6 A;  2F42 A;  2ECN A;  5H1U A;  3T7L A;  3U5P A;  2MT5 A;  4MVT A;  1U6G B;  2CSY A;  4WZ0 A;  2PNX A;  1K2F A;  4UP5 A;  3FL2 A;  4S3O C;  3V43 A;  3C5K A;  2VJE A;  1Z2Q A;  4WZ3 B;  5JG6 A;  4AYC A;  5C11 A;  3EB5 A;  5TBN A;  2L80 A;  2LXP C;  3MHH A;  3ZVZ B;  4S3O B;  2YSJ A;  1MM3 A;  4AUQ B;  4YBM A;  4N3W A;  5TRB A;  4PTB A;  3O7A A;  2C2L A;  2CT2 A;  3KQI A;  4FK5 A;  3PUQ A;  2C2V S;  1LDK C;  2JMD A;  2XB1 A;  3EB6 A;  5LKZ A;  3O34 A;  5B8D A;  4ZUX U;  3O37 A;  1WIL A;  2MA6 A;  1HYJ A;  5LKX A;  3ASL A;  2YYR A;  4LK9 A;  4YAX A;  2G43 A;  4AVX A;  5B78 A;  2MIQ A;  4LAD B;  5TAB A;  5LKT A;  2L5U A;  1WEE A;  3U5N A;  2MNZ A;  4I7C A;  2KWJ A;  2K16 A;  2H0D B;  2KWK A;  2FSA A;  1WES A;  2ECT A;  2NAA A;  3LQJ A;  2L0B A;  2VJF A;  3HCT A;  3T6R A;  1XWH A;  5C13 A;  2KU3 A;  3I2D A;  5D1L B;  1MM2 A;  2F6N A;  3ZYQ A;  4I7D A;  3LQH A;  3M63 A;  1HYI A;  2ECW A;  5AIT A;  2XEU A;  2ZET C;  4A4B A;  4LKA A;  2Y43 A;  2YSM A;  2CKL B;  3SOX A;  3VK6 A;  1WEV A;  5DKA A;  2KGI A;  3PUR A;  1F62 A;  2LXH C;  4WZ2 A;  3U5O A;  5KH7 A;  3HCS A;  4R7E A;  5I3L A;  4GNF A;  2VNF A;  1X4U A;  4LJN A;  4I7B A;  2QIC A;  2M85 A;  2UZG A;  4FIP A;  4P5O B;  1ZBD B;  2MNY A;  2MUM A;  3IHP A;  2LRI C;  3O33 A;  1X4J A;  1Z6U A;  1JM7 B;  1WEW A;  2EGP A;  4XI1 A;  3LRQ A;  4BHW A;  3RPG C;  1WE9 A;  5H1V A;  4TKP B;  5FER A;  1DVP A;  2L43 A;  4R2Y A;  2K1J A;  2KGG A;  4L58 A;  4CA1 A;  3HTK C;  3DQV R;  3RPG B;  1WIM A;  4QF3 A;  2YRE A;  3ZPV E;  2VJE B;  2I50 A;  4MSX A;  1WEU A;  2K17 A;  5KH9 A;  4AYC B;  2ECG A;  5LCW B;  3SOU A;  3SHB A;  1T1H A;  4IC2 A;  5D1M B; 
#chains in the Genus database with same CATH topology
 2VPD A;  4F52 B;  2E61 A;  4A49 A;  5G05 B;  2CRW A;  5B77 A;  3ZPV 1;  3GL6 A;  3N9Q A;  2MD8 C;  2XOC A;  3M7K A;  4B86 C;  3N9L A;  4N4F A;  2E6R A;  2JUN A;  2LGK A;  2M3H A;  3DDT A;  4A0C D;  3T9K A;  4B7Y C;  3O35 A;  4W4U A;  2KKY A;  2M1R A;  4YAB A;  3L1X A;  2KWO A;  5TDR A;  5FB0 A;  3N9P A;  5SVI A;  5G0F A;  2YQL A;  2LV9 A;  3MHS A;  3KNV A;  2LN0 A;  2FUU A;  2YU4 A;  5LKU A;  2AN6 A;  3KV5 A;  2E6S A;  1FBV A;  1LDJ B;  3ZTG A;  5B79 A;  3MDB C;  1Z60 A;  2JMI A;  2LGV A;  1WEO A;  4C9Z A;  1WEM A;  4AP4 A;  3ZVY A;  2VJF B;  2YW8 A;  2M6M A;  3PHD A;  1RMD A;  1X4I A;  3LDY A;  2MA5 A;  2M13 A;  3N9N A;  3ZNI A;  2KFT A;  2HDP A;  2LDR A;  4LLB A;  1WEP A;  2ECI A;  3O70 A;  2YHN A;  2KIZ A;  2JMJ A;  3FAN A;  2PUY A;  1E4U A;  3RTR B;  2G45 A;  3HCU A;  2KYU A;  4X3G A;  4Z0R A;  3M62 A;  1VYX A;  3N9M A;  2Y1M A;  4YAD A;  5TDW A;  1V87 A;  3L1Z B;  2EGM A;  2EOD A;  5D1K B;  4UI9 B;  1JOC A;  1WFK A;  2QJ0 A;  2KWN A;  1VFY A;  2L75 A;  1G25 A;  2LGG A;  2KRE A;  4YBS A;  5SVY A;  2YT5 A;  4WA6 A;  3E2D A;  3O47 A;  4O64 A;  5G04 B;  5H1T A;  5K3Q A;  2VPB A;  2YQM A;  4Q6F A;  4UP0 A;  2VPG A;  2CSZ A;  3N9O A;  2D8S A;  1BOR A;  2QIZ A;  2LQ6 A;  4V3K C;  5B75 A;  4GB0 A;  3LQI A;  3FJU B;  5FEY A;  2B0O E;  2KE1 A;  2RI7 A;  1VD4 A;  2IDA A;  2OXQ C;  5AIU A;  2LGL A;  3M99 A;  2ECJ A;  4PPE A;  3GV4 A;  4FJC A;  3H7H A;  2RSD A;  2F6J A;  4QF2 A;  2BAY A;  2H0D A;  2YHO A;  5J3X A;  5H9M A;  5KH3 A;  3DPL R;  1IYM A;  2IQJ A;  4ZDT A;  3U5M A;  3L11 A;  1WEQ A;  2YUC A;  3SOW A;  2XP0 A;  4L7X A;  2G6Q A;  5FB1 A;  4V3L C;  3O36 A;  5EYA F;  3QZV A;  4CCG X;  2K4D A;  5DIN A;  4GNG A;  2CKL A;  2MD7 B;  4R8P K;  2KR4 A;  2YUR A;  2JM3 A;  1MBM A;  2VPE A;  1WGM A;  4YC9 A;  4YAT A;  5SVI B;  4GND A;  1FP0 A;  2HYE D;  2JRJ A;  2P57 A;  4ZQL A;  3LVQ E;  4A4C A;  2MKE A;  1CHC A;  4GNE A;  2VP7 A;  4YBT A;  1WEN A;  2ECV A;  3NG2 A;  3KV6 A;  2FUI A;  4FO9 A;  2Y1N A;  2DX8 A;  3C6W A;  1N87 A;  4IC3 A;  5B76 A;  4NN2 A;  1JM7 A;  4BBQ A;  2D8U A;  2EA6 A;  2F42 A;  2ECN A;  5H1U A;  2XOY A;  3T7L A;  3U5P A;  2MT5 A;  4MVT A;  1U6G B;  2CSY A;  2OWA A;  4WZ0 A;  2PNX A;  1K2F A;  4UP5 A;  2DJA A;  3FL2 A;  4S3O C;  3V43 A;  3C5K A;  2VJE A;  1Z2Q A;  4WZ3 B;  5JG6 A;  3DWD A;  4AYC A;  5C11 A;  3FEH A;  3EB5 A;  4F1P A;  5TBN A;  2L80 A;  2LXP C;  3MHH A;  3ZVZ B;  2CSV A;  2YSJ A;  4S3O B;  1MM3 A;  4AUQ B;  4YBM A;  3JUE A;  4N3W A;  2XOZ A;  5TRB A;  4PTB A;  3Q1D A;  3O7A A;  2C2L A;  2CT2 A;  3KQI A;  4FK5 A;  3PUQ A;  2C2V S;  3KDE C;  1LDK C;  2JMD A;  2XB1 A;  3EB6 A;  5LKZ A;  3O34 A;  5B8D A;  4ZUX U;  3FM8 C;  3O37 A;  1WIL A;  2MA6 A;  1HYJ A;  2YVR A;  4Z0O A;  5LKX A;  3ASL A;  2YYR A;  4LK9 A;  4YAX A;  2G43 A;  4AVX A;  5SVX A;  5B78 A;  2MIQ A;  4LAD B;  5TAB A;  5LKT A;  2L5U A;  1WEE A;  3LJU X;  3U5N A;  2MNZ A;  4I7C A;  2KWJ A;  2KKX A;  2K16 A;  2H0D B;  2KWK A;  2FSA A;  1WES A;  2ECT A;  2NAA A;  3LQJ A;  2L0B A;  2VJF A;  3HCT A;  3T6R A;  1XWH A;  4QQ4 A;  5C13 A;  2KU3 A;  3I2D A;  5D1L B;  1MM2 A;  2F6N A;  3ZYQ A;  4I7D A;  3LQH A;  3M63 A;  1HYI A;  2ECW A;  3FAO A;  4OGC A;  5AIT A;  2XEU A;  2ZET C;  4H9D A;  4A4B A;  4LKA A;  2Y43 A;  2YSM A;  2CKL B;  3SOX A;  3VK6 A;  1WEV A;  2FD4 A;  2KGI A;  3PUR A;  4OGE A;  5DKA A;  1F62 A;  2LXH C;  2DSM A;  2EXU A;  4WZ2 A;  3U5O A;  5KH7 A;  3PLW A;  3HCS A;  4R7E A;  5I3L A;  4GNF A;  2VNF A;  1X4U A;  4LJN A;  2L7P A;  2LAU A;  4O62 A;  4I7B A;  2QIC A;  2M85 A;  2UZG A;  4FIP A;  2CON A;  4P5O B;  1ZBD B;  2MNY A;  2MUM A;  3IHP A;  1DCQ A;  2LRI C;  3O33 A;  1X4J A;  1Z6U A;  1JM7 B;  1WEW A;  2EGP A;  4XI1 A;  3LRQ A;  4BHW A;  3RPG C;  1WE9 A;  5H1V A;  4TKP B;  5FER A;  1DVP A;  2L43 A;  4R2Y A;  2K1J A;  2KGG A;  4L58 A;  4CA1 A;  2FFW A;  3HTK C;  3DQV R;  3RPG B;  1WIM A;  2CRR A;  4QF3 A;  3SUB A;  2YRE A;  3LVR E;  3ZPV E;  2VJE B;  4MSX A;  2I50 A;  1WEU A;  2K17 A;  5KH9 A;  4AYC B;  2ECG A;  5LCW B;  3SOU A;  3SHB A;  1T1H A;  4IC2 A;  5D1M B;  2RR4 A; 
#chains in the Genus database with same CATH homology
 2VPD A;  4F52 B;  4A49 A;  5G05 B;  5B77 A;  3ZPV 1;  3GL6 A;  3N9Q A;  2MD8 C;  4B86 C;  3N9L A;  4N4F A;  2E6R A;  2LGK A;  2M3H A;  4A0C D;  4B7Y C;  3O35 A;  4W4U A;  2M1R A;  4YAB A;  3L1X A;  2KWO A;  5TDR A;  5FB0 A;  3N9P A;  5G0F A;  2YQL A;  2LV9 A;  3MHS A;  3KNV A;  2LN0 A;  2FUU A;  2YU4 A;  5LKU A;  2AN6 A;  3KV5 A;  2E6S A;  1FBV A;  1LDJ B;  3ZTG A;  5B79 A;  1Z60 A;  2JMI A;  2LGV A;  1WEO A;  4C9Z A;  1WEM A;  4AP4 A;  3ZVY A;  2VJF B;  2YW8 A;  2M6M A;  3PHD A;  1RMD A;  1X4I A;  2MA5 A;  3N9N A;  3ZNI A;  2KFT A;  2HDP A;  2LDR A;  4LLB A;  1WEP A;  2ECI A;  3O70 A;  2YHN A;  2KIZ A;  2JMJ A;  2PUY A;  1E4U A;  3RTR B;  2G45 A;  3HCU A;  2KYU A;  4X3G A;  3M62 A;  1VYX A;  3N9M A;  2Y1M A;  4YAD A;  5TDW A;  1V87 A;  3L1Z B;  2EOD A;  5D1K B;  4UI9 B;  1JOC A;  1WFK A;  2QJ0 A;  2KWN A;  1VFY A;  2L75 A;  1G25 A;  2LGG A;  2KRE A;  4YBS A;  2YT5 A;  4WA6 A;  5G04 B;  4O64 A;  5H1T A;  2VPB A;  2YQM A;  4Q6F A;  4UP0 A;  2VPG A;  2CSZ A;  3N9O A;  2D8S A;  1BOR A;  2QIZ A;  2LQ6 A;  4V3K C;  5B75 A;  4GB0 A;  3LQI A;  5FEY A;  2KE1 A;  2RI7 A;  1VD4 A;  2IDA A;  2OXQ C;  5AIU A;  2LGL A;  3M99 A;  2ECJ A;  4PPE A;  3GV4 A;  4FJC A;  2RSD A;  2F6J A;  4QF2 A;  2BAY A;  2H0D A;  2YHO A;  5J3X A;  5H9M A;  5KH3 A;  3DPL R;  1IYM A;  4ZDT A;  3U5M A;  3L11 A;  1WEQ A;  2YUC A;  3SOW A;  4L7X A;  2G6Q A;  5FB1 A;  4V3L C;  3O36 A;  5EYA F;  3QZV A;  4CCG X;  2K4D A;  5DIN A;  4GNG A;  2CKL A;  2MD7 B;  4R8P K;  2KR4 A;  2YUR A;  2VPE A;  1WGM A;  4YC9 A;  4YAT A;  4GND A;  1FP0 A;  2HYE D;  2JRJ A;  4ZQL A;  4A4C A;  1CHC A;  4GNE A;  2VP7 A;  4YBT A;  1WEN A;  2ECV A;  3NG2 A;  3KV6 A;  2FUI A;  4FO9 A;  2Y1N A;  2DX8 A;  3C6W A;  1N87 A;  4IC3 A;  5B76 A;  4NN2 A;  1JM7 A;  4BBQ A;  2EA6 A;  2F42 A;  2ECN A;  5H1U A;  3T7L A;  3U5P A;  2MT5 A;  4MVT A;  1U6G B;  2CSY A;  4WZ0 A;  2PNX A;  1K2F A;  4UP5 A;  3FL2 A;  4S3O C;  3V43 A;  3C5K A;  2VJE A;  1Z2Q A;  4WZ3 B;  5JG6 A;  4AYC A;  5C11 A;  3EB5 A;  5TBN A;  2L80 A;  2LXP C;  3MHH A;  3ZVZ B;  4S3O B;  2YSJ A;  1MM3 A;  4AUQ B;  4YBM A;  4N3W A;  5TRB A;  4PTB A;  3O7A A;  2C2L A;  2CT2 A;  3KQI A;  4FK5 A;  3PUQ A;  2C2V S;  1LDK C;  2JMD A;  2XB1 A;  3EB6 A;  5LKZ A;  3O34 A;  5B8D A;  4ZUX U;  3O37 A;  1WIL A;  2MA6 A;  1HYJ A;  5LKX A;  3ASL A;  2YYR A;  4LK9 A;  4YAX A;  2G43 A;  4AVX A;  5B78 A;  2MIQ A;  4LAD B;  5TAB A;  5LKT A;  2L5U A;  1WEE A;  3U5N A;  2MNZ A;  4I7C A;  2KWJ A;  2K16 A;  2H0D B;  2KWK A;  2FSA A;  1WES A;  2ECT A;  2NAA A;  3LQJ A;  2L0B A;  2VJF A;  3HCT A;  3T6R A;  1XWH A;  5C13 A;  2KU3 A;  3I2D A;  5D1L B;  1MM2 A;  2F6N A;  3ZYQ A;  4I7D A;  3LQH A;  3M63 A;  1HYI A;  2ECW A;  5AIT A;  2XEU A;  2ZET C;  4A4B A;  4LKA A;  2Y43 A;  2YSM A;  2CKL B;  3SOX A;  3VK6 A;  1WEV A;  5DKA A;  2KGI A;  3PUR A;  1F62 A;  2LXH C;  4WZ2 A;  3U5O A;  5KH7 A;  3HCS A;  4R7E A;  5I3L A;  4GNF A;  2VNF A;  1X4U A;  4LJN A;  4I7B A;  2QIC A;  2M85 A;  2UZG A;  4FIP A;  4P5O B;  1ZBD B;  2MNY A;  2MUM A;  3IHP A;  2LRI C;  3O33 A;  1X4J A;  1Z6U A;  1JM7 B;  1WEW A;  2EGP A;  4XI1 A;  3LRQ A;  4BHW A;  3RPG C;  1WE9 A;  5H1V A;  4TKP B;  5FER A;  1DVP A;  2L43 A;  4R2Y A;  2K1J A;  2KGG A;  4L58 A;  4CA1 A;  3HTK C;  3DQV R;  3RPG B;  1WIM A;  4QF3 A;  2YRE A;  3ZPV E;  2VJE B;  2I50 A;  4MSX A;  1WEU A;  2K17 A;  5KH9 A;  4AYC B;  2ECG A;  5LCW B;  3SOU A;  3SHB A;  1T1H A;  4IC2 A;  5D1M B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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