2QJ0A

Structure of the yeast u-box-containing ubiquitin ligase ufd2p
Total Genus 318
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
318
sequence length
957
structure length
937
Chain Sequence
GSEFRSMTAIEDILQITTDPSDTRGYSLLKSLGVDFIDTLLLYQLTENEKLDKPFEYLNDCFRRNQQQKRITKNKPNAESLHSTFQEIDRLVIGYGVVALQIENFCMNGAFINYITGIVSNVNSYTDFLSQIIQRAILEGTALDLLNAVFPTLLEYCNKHVSHFDLNESVIYNNVLTIFELFVTFKPIAEIFTKIDGFFADYSCKPQDFERKTILGPILSLSPIEAAVAIRNYGDNLLRSKQQTAMIHESLQAEHKVVIDRLFFIVDKLVRGSLNSRTDMISYFAHIANKNHLRRADHPPFKELSSNGFMSNITLLLVRFSQPFLDISYKKIDKIDANYFNNPSLFIDLSGETRLNSDFKEADAFYDKNRKTADSKPNFISDCFFLTLTYLHYGLGGTLSFEEKMGSEIKALKEEIEKVKKIAANHDVFARFITAQLSKMEKALKTTESLRFALQGFFAHRSLQLEVFDFICGASTFLIRVVDPEHEFPFKQIKLPLIPDQIGVENVDNADFLRAHAPVPFKYYPEFVVEGPVNYSLYISKYQTSPIFRNPRLGSFVEFTTMVLRCPELVSNPHLKGKLVQLLSVGAMPLTDNSPGFMMDIFEHDELVNKNLLYALLDFYVIVEKTGSSSQFYDKFNSRYSISIILEELYYKIPSYKNQLIWQSQNNADFFVRFVARMLNDLTFLLDEGLSNLAEVHNIQNELDEDKELQTRLASASRQAKSSCGLADKSMKLFEIYSKDIPAAFVTPEIVYRLASMLNYNLESLVGPKCGELKVKDPQSYSFNPKDLLKALTTVYINLSEQSEFISAVAKDERSFNRNLFVRAVDILGRKTGLASPEFIEKLLNFANKAEEQRKADEEEDLEYGDVPDEFLDPLMYTIMKDPVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDVTPNEELRQKILCFKKQK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Inaugural Article: Structure and function of the yeast U-box-containing ubiquitin ligase Ufd2p.
pubmed doi rcsb
source organism Saccharomyces cerevisiae
molecule tags Ligase
molecule keywords Ubiquitin conjugation factor E4
total genus 318
structure length 937
sequence length 957
ec nomenclature ec 2.3.2.27: RING-type E3 ubiquitin transferase.
pdb deposition date 2007-07-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF04564 U-box U-box domain
A PF10408 Ufd2P_core Ubiquitin elongating factor core
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.40.10 Alpha Beta 2-Layer Sandwich Herpes Virus-1 Zinc/RING finger domain, C3HC4 (zinc finger) 2qj0A02
5AIUA 2F42A 2YYRA 4FIPA 2M6MA 2YREA 5KH9A 2RSDA 2M3HA 5H9MA 2LN0A 5FEYA 4LKAA 2MNZA 4L58A 4FO9A 4GNGA 2Y1NA 4UI9B 2QICA 5LKUA 2ECNA 2CT2A 2YU4A 1WEVA 1WEOA 1WESA 3ZPV1 3DPLR 3PURA 2G6QA 2CSYA 5TDWA 2KR4A 4ZQLA 2QIZA 2XEUA 5AITA 2ECTA 4MSXA 5H1VA 4NN2A 4WZ0A 2LQ6A 2M1RA 2NAAA 3ZPVE 4X3GA 3PUQA 1X4IA 4V3KC 2KGGA 3ZVZB 4B7YC 5D1KB 1WEWA 4AYCA 4YC9A 3O7AA 3ZYQA 2ECGA 5D1LB 2EODA 2LXHC 5B75A 3ASLA 3IHPA 1WEMA 2UZGA 2ECVA 1JOCA 2G43A 2VJEB 3U5MA 5LKXA 1VFYA 2VJEA 5B8DA 5TDRA 2HDPA 3C5KA 5D1MB 1N87A 1WILA 3KNVA 2MD7B 4I7DA 1V87A 4S3OC 5H1UA 3O70A 2M85A 5C13A 4QF2A 3ZNIA 3C6WA 4L7XA 3N9LA 2JRJA 3U5OA 5B78A 2YW8A 2K17A 5B77A 5FB1A 2VPDA 2RI7A 2YHOA 1X4JA 2MA5A 2MIQA 5B76A 3N9PA 1MM2A 2C2LA 5LKZA 3NG2A 2MT5A 4WZ2A 2L5UA 1WGMA 4IC2A 2YUCA 1WEUA 3SOUA 3O37A 1G25A 4N4FA 2K16A 3ZTGA 2F6NA 3N9MA 4FJCA 2FUUA 3MHSA 4BHWA 3LQJA 5FERA 2KWNA 2YT5A 4WZ3B 4I7BA 5G04B 5LKTA 2KWOA 2MNYA 4IC3A 4LJNA 4A4CA 1DVPA 1VYXA 2YURA 1JM7A 3SOXA 3HCUA 4N3WA 1JM7B 3N9QA 4XI1A 4GNFA 3M63A 4MVTA 2LRIC 3EB6A 2K1JA 2ZETC 2CKLA 1F62A 3M99A 4YBMA 2MA6A 1WIMA 2Y1MA 4TKPB 4GNEA 2E6RA 3QZVA 1HYJA 2DX8A 1ZBDB 3N9OA 2YQMA 2ECJA 4LADB 3O34A 5KH7A 2CKLB 4R2YA 2L80A 4F52B 3LQIA 4P5OB 4ZDTA 4V3LC 3PHDA 3L1ZB 1LDKC 2F6JA 2XB1A 4GB0A 4A0CD 5G0FA 3U5NA 4ZUXU 2L75A 3O33A 2MD8C 3N9NA 2LV9A 5DKAA 5KH3A 5B79A 2FSAA 2KU3A 4C9ZA 2KE1A 3L1XA 3DQVR 2ECWA 3ZVYA 3M62A 4O64A 1Z60A 4AUQB 2YHNA 4YBSA 2YSMA 5J3XA 2CSZA 5TRBA 2JMIA 2VPEA 3SHBA 4YAXA 1LDJB 4AVXA 3RPGC 2IDAA 2VPGA 2C2VS 1CHCA 2H0DB 2L0BA 1FP0A 1FBVA 4UP0A 5I3LA 2LXPC 3GV4A 3LRQA 3U5PA 5G05B 3MHHA 1WENA 2VP7A 1WE9A 1MM3A 2LDRA 2AN6A 2E6SA 3SOWA 2ECIA 2D8SA 2KGIA 5TABA 1HYIA 2KFTA 2LGGA 1IYMA 3HTKC 4W4UA 1VD4A 2PUYA 4R8PK 3RPGB 3I2DA 4AYCB 2YSJA 2VJFB 4YBTA 1U6GB 4BBQA 3RTRB 1Z2QA 5FB0A 2LGKA 4UP5A 2K4DA 1BORA 1RMDA 4B86C 1E4UA 4S3OB 2JMJA 3KV5A 2YQLA 4FK5A 3LQHA 5DINA 2PNXA 5EYAF 2HYED 2H0DA 4WA6A 4LLBA 2LGVA 5LCWB 2EA6A 5C11A 5TBNA 1XWHA 2BAYA 3EB5A 4YADA 4CA1A 2KREA 3KQIA 2L43A 2VNFA 2G45A 1Z6UA 1WEEA 3FL2A 3KV6A 3O35A 3O36A 2KWJA 4R7EA 3VK6A 1WEPA 2MUMA 3V43A 4PTBA 2I50A 4A49A 3GL6A 4YATA 4A4BA 2VPBA 4PPEA 4GNDA 5JG6A 3HCSA 1WEQA 2Y43A 3T6RA 2FUIA 2OXQC 4QF3A 1X4UA 2VJFA 4Q6FA 1K2FA 1T1HA 2KIZA 2QJ0A 4AP4A 2JMDA 3T7LA 2LGLA 2KWKA 3L11A 4CCGX 1WFKA 2EGPA 4LK9A 2KYUA 4YABA 5H1TA 3HCTA 4I7CA
chains in the Genus database with same CATH superfamily
5AIUA 2F42A 2YYRA 4FIPA 2M6MA 2YREA 5KH9A 2RSDA 2M3HA 5H9MA 2LN0A 5FEYA 4LKAA 2MNZA 4L58A 4FO9A 2YVRA 4GNGA 2Y1NA 4UI9B 2QICA 5LKUA 2ECNA 2CT2A 2YU4A 1WEVA 1WEOA 1WESA 3ZPV1 3DPLR 3PURA 2G6QA 2CSYA 5TDWA 3FANA 2KR4A 4ZQLA 2QIZA 2XEUA 5AITA 2ECTA 4MSXA 5H1VA 4NN2A 4WZ0A 2LQ6A 2M1RA 2NAAA 1MBMA 3ZPVE 4X3GA 3PUQA 1X4IA 4V3KC 2KGGA 3ZVZB 4B7YC 3PLWA 5D1KB 3T9KA 1WEWA 4AYCA 4YC9A 3O7AA 2CONA 2L7PA 3ZYQA 2ECGA 5D1LB 2EODA 2LXHC 5B75A 3ASLA 3IHPA 1WEMA 2UZGA 2OWAA 2ECVA 3Q1DA 3FEHA 5SVYA 1JOCA 2G43A 2VJEB 3U5MA 2P57A 5LKXA 1VFYA 2XOCA 2VJEA 5B8DA 5TDRA 2HDPA 2EGMA 3C5KA 5D1MB 1N87A 1WILA 3KNVA 2MD7B 4I7DA 1V87A 4S3OC 5H1UA 5SVIB 3O70A 2M85A 3JUEA 5C13A 4QF2A 3LDYA 3ZNIA 3C6WA 4L7XA 3N9LA 2JRJA 3U5OA 5B78A 2YW8A 2K17A 2KKYA 5B77A 5FB1A 2VPDA 2RI7A 2YHOA 1X4JA 5K3QA 2MA5A 2MIQA 5B76A 3N9PA 1MM2A 2C2LA 3DWDA 5LKZA 3NG2A 2MT5A 4WZ2A 2L5UA 1WGMA 4IC2A 2YUCA 1WEUA 3FM8C 3SOUA 3O37A 1G25A 4N4FA 2K16A 3ZTGA 2F6NA 3N9MA 4FJCA 2FUUA 3MHSA 3DDTA 4BHWA 3LQJA 5FERA 2KWNA 2YT5A 4WZ3B 2CRWA 4I7BA 5G04B 5LKTA 2KWOA 2MNYA 4IC3A 4LJNA 4A4CA 2CRRA 1DVPA 1VYXA 2YURA 1JM7A 2DJAA 3SOXA 3KDEC 3HCUA 3O47A 2IQJA 4N3WA 3FAOA 1JM7B 3N9QA 4XI1A 2KKXA 4GNFA 2EXUA 3M63A 4MVTA 2LRIC 3EB6A 2K1JA 2ZETC 3LVQE 2CKLA 1F62A 3M99A 4YBMA 2MA6A 1WIMA 2Y1MA 4TKPB 4GNEA 2E6RA 3QZVA 1HYJA 2DX8A 1ZBDB 3N9OA 3LJUX 2YQMA 2ECJA 4LADB 5SVXA 3O34A 5KH7A 2CKLB 4R2YA 2L80A 4F52B 3LQIA 4P5OB 4ZDTA 4V3LC 3PHDA 3L1ZB 2FFWA 1LDKC 2F6JA 2E61A 2XB1A 4GB0A 4A0CD 5G0FA 3U5NA 4ZUXU 2L75A 3O33A 2MD8C 3N9NA 2LV9A 4OGCA 5DKAA 5KH3A 4F1PA 5B79A 2FSAA 2KU3A 3E2DA 4C9ZA 2KE1A 3L1XA 3DQVR 2ECWA 3ZVYA 2M13A 3FJUB 3M62A 4O64A 1Z60A 4AUQB 2YHNA 3SUBA 4YBSA 2YSMA 5J3XA 2CSZA 5TRBA 2JMIA 2VPEA 3SHBA 4YAXA 1LDJB 4AVXA 3RPGC 2IDAA 2VPGA 4Z0RA 2C2VS 2DSMA 1CHCA 2H0DB 2L0BA 4Z0OA 1FBVA 1FP0A 4UP0A 5I3LA 2LXPC 3GV4A 3LRQA 3U5PA 5G05B 3MHHA 1WENA 4OGEA 2VP7A 2FD4A 1WE9A 1MM3A 2LDRA 5SVIA 2AN6A 2E6SA 3SOWA 2ECIA 2D8SA 2KGIA 5TABA 1HYIA 2KFTA 2LGGA 1IYMA 3HTKC 4W4UA 1VD4A 2PUYA 4R8PK 2MKEA 3RPGB 2JM3A 3I2DA 4AYCB 2YSJA 3H7HA 2VJFB 4YBTA 1U6GB 4BBQA 2CSVA 4QQ4A 3RTRB 1Z2QA 5FB0A 2LGKA 4UP5A 2K4DA 1BORA 1RMDA 4B86C 1E4UA 4S3OB 2JMJA 3KV5A 1DCQA 2YQLA 4FK5A 3LQHA 5DINA 2D8UA 2PNXA 2LAUA 5EYAF 2HYED 2H0DA 4WA6A 2JUNA 4LLBA 2LGVA 2RR4A 5LCWB 2EA6A 5C11A 5TBNA 1XWHA 2BAYA 3EB5A 4YADA 4CA1A 2KREA 3KQIA 2L43A 2VNFA 2G45A 1Z6UA 1WEEA 2XOYA 2XP0A 3FL2A 3KV6A 3LVRE 3O35A 3O36A 2KWJA 4R7EA 3VK6A 1WEPA 2MUMA 3V43A 4PTBA 2I50A 4A49A 3GL6A 4H9DA 4YATA 4A4BA 2VPBA 4PPEA 4GNDA 5JG6A 3HCSA 4O62A 1WEQA 2Y43A 3T6RA 2FUIA 2B0OE 2OXQC 2XOZA 4QF3A 1X4UA 3MDBC 2VJFA 4Q6FA 1K2FA 1T1HA 2KIZA 2QJ0A 4AP4A 2JMDA 3T7LA 2LGLA 2KWKA 3L11A 4CCGX 1WFKA 2EGPA 4LK9A 2KYUA 4YABA 5H1TA 3M7KA 3HCTA 4I7CA
chains in the Genus database with same CATH topology
5AIUA 2F42A 2YYRA 4FIPA 2M6MA 2YREA 5KH9A 2RSDA 2M3HA 5H9MA 2LN0A 5FEYA 4LKAA 2MNZA 4L58A 4FO9A 4GNGA 2Y1NA 4UI9B 2QICA 5LKUA 2ECNA 2CT2A 2YU4A 1WEVA 1WEOA 1WESA 3ZPV1 3DPLR 3PURA 2G6QA 2CSYA 5TDWA 2KR4A 4ZQLA 2QIZA 2XEUA 5AITA 2ECTA 4MSXA 5H1VA 4NN2A 4WZ0A 2LQ6A 2M1RA 2NAAA 3ZPVE 4X3GA 3PUQA 1X4IA 4V3KC 2KGGA 3ZVZB 4B7YC 5D1KB 1WEWA 4AYCA 4YC9A 3O7AA 3ZYQA 2ECGA 5D1LB 2EODA 2LXHC 5B75A 3ASLA 3IHPA 1WEMA 2UZGA 2ECVA 1JOCA 2G43A 2VJEB 3U5MA 5LKXA 1VFYA 2VJEA 5B8DA 5TDRA 2HDPA 3C5KA 5D1MB 1N87A 1WILA 3KNVA 2MD7B 4I7DA 1V87A 4S3OC 5H1UA 3O70A 2M85A 5C13A 4QF2A 3ZNIA 3C6WA 4L7XA 3N9LA 2JRJA 3U5OA 5B78A 2YW8A 2K17A 5B77A 5FB1A 2VPDA 2RI7A 2YHOA 1X4JA 2MA5A 2MIQA 5B76A 3N9PA 1MM2A 2C2LA 5LKZA 3NG2A 2MT5A 4WZ2A 2L5UA 1WGMA 4IC2A 2YUCA 1WEUA 3SOUA 3O37A 1G25A 4N4FA 2K16A 3ZTGA 2F6NA 3N9MA 4FJCA 2FUUA 3MHSA 4BHWA 3LQJA 5FERA 2KWNA 2YT5A 4WZ3B 4I7BA 5G04B 5LKTA 2KWOA 2MNYA 4IC3A 4LJNA 4A4CA 1DVPA 1VYXA 2YURA 1JM7A 3SOXA 3HCUA 4N3WA 1JM7B 3N9QA 4XI1A 4GNFA 3M63A 4MVTA 2LRIC 3EB6A 2K1JA 2ZETC 2CKLA 1F62A 3M99A 4YBMA 2MA6A 1WIMA 2Y1MA 4TKPB 4GNEA 2E6RA 3QZVA 1HYJA 2DX8A 1ZBDB 3N9OA 2YQMA 2ECJA 4LADB 3O34A 5KH7A 2CKLB 4R2YA 2L80A 4F52B 3LQIA 4P5OB 4ZDTA 4V3LC 3PHDA 3L1ZB 1LDKC 2F6JA 2XB1A 4GB0A 4A0CD 5G0FA 3U5NA 4ZUXU 2L75A 3O33A 2MD8C 3N9NA 2LV9A 5DKAA 5KH3A 5B79A 2FSAA 2KU3A 4C9ZA 2KE1A 3L1XA 3DQVR 2ECWA 3ZVYA 3M62A 4O64A 1Z60A 4AUQB 2YHNA 4YBSA 2YSMA 5J3XA 2CSZA 5TRBA 2JMIA 2VPEA 3SHBA 4YAXA 1LDJB 4AVXA 3RPGC 2IDAA 2VPGA 2C2VS 1CHCA 2H0DB 2L0BA 1FP0A 1FBVA 4UP0A 5I3LA 2LXPC 3GV4A 3LRQA 3U5PA 5G05B 3MHHA 1WENA 2VP7A 1WE9A 1MM3A 2LDRA 2AN6A 2E6SA 3SOWA 2ECIA 2D8SA 2KGIA 5TABA 1HYIA 2KFTA 2LGGA 1IYMA 3HTKC 4W4UA 1VD4A 2PUYA 4R8PK 3RPGB 3I2DA 4AYCB 2YSJA 2VJFB 4YBTA 1U6GB 4BBQA 3RTRB 1Z2QA 5FB0A 2LGKA 4UP5A 2K4DA 1BORA 1RMDA 4B86C 1E4UA 4S3OB 2JMJA 3KV5A 2YQLA 4FK5A 3LQHA 5DINA 2PNXA 5EYAF 2HYED 2H0DA 4WA6A 4LLBA 2LGVA 5LCWB 2EA6A 5C11A 5TBNA 1XWHA 2BAYA 3EB5A 4YADA 4CA1A 2KREA 3KQIA 2L43A 2VNFA 2G45A 1Z6UA 1WEEA 3FL2A 3KV6A 3O35A 3O36A 2KWJA 4R7EA 3VK6A 1WEPA 2MUMA 3V43A 4PTBA 2I50A 4A49A 3GL6A 4YATA 4A4BA 2VPBA 4PPEA 4GNDA 5JG6A 3HCSA 1WEQA 2Y43A 3T6RA 2FUIA 2OXQC 4QF3A 1X4UA 2VJFA 4Q6FA 1K2FA 1T1HA 2KIZA 2QJ0A 4AP4A 2JMDA 3T7LA 2LGLA 2KWKA 3L11A 4CCGX 1WFKA 2EGPA 4LK9A 2KYUA 4YABA 5H1TA 3HCTA 4I7CA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5AIU A;  2F42 A;  2YYR A;  4FIP A;  2M6M A;  2YRE A;  5KH9 A;  2RSD A;  2M3H A;  5H9M A;  2LN0 A;  5FEY A;  4LKA A;  2MNZ A;  4L58 A;  4FO9 A;  4GNG A;  2Y1N A;  4UI9 B;  2QIC A;  5LKU A;  2ECN A;  2CT2 A;  2YU4 A;  1WEV A;  1WEO A;  1WES A;  3ZPV 1;  3DPL R;  3PUR A;  2G6Q A;  2CSY A;  5TDW A;  2KR4 A;  4ZQL A;  2QIZ A;  2XEU A;  5AIT A;  2ECT A;  4MSX A;  5H1V A;  4NN2 A;  4WZ0 A;  2LQ6 A;  2M1R A;  2NAA A;  3ZPV E;  4X3G A;  3PUQ A;  1X4I A;  4V3K C;  2KGG A;  3ZVZ B;  4B7Y C;  5D1K B;  1WEW A;  4AYC A;  4YC9 A;  3O7A A;  3ZYQ A;  2ECG A;  5D1L B;  2EOD A;  2LXH C;  5B75 A;  3ASL A;  3IHP A;  1WEM A;  2UZG A;  2ECV A;  1JOC A;  2G43 A;  2VJE B;  3U5M A;  5LKX A;  1VFY A;  2VJE A;  5B8D A;  5TDR A;  2HDP A;  3C5K A;  5D1M B;  1N87 A;  1WIL A;  3KNV A;  2MD7 B;  4I7D A;  1V87 A;  4S3O C;  5H1U A;  3O70 A;  2M85 A;  5C13 A;  4QF2 A;  3ZNI A;  3C6W A;  4L7X A;  3N9L A;  2JRJ A;  3U5O A;  5B78 A;  2YW8 A;  2K17 A;  5B77 A;  5FB1 A;  2VPD A;  2RI7 A;  2YHO A;  1X4J A;  2MA5 A;  2MIQ A;  5B76 A;  3N9P A;  1MM2 A;  2C2L A;  5LKZ A;  3NG2 A;  2MT5 A;  4WZ2 A;  2L5U A;  1WGM A;  4IC2 A;  2YUC A;  1WEU A;  3SOU A;  3O37 A;  1G25 A;  4N4F A;  2K16 A;  3ZTG A;  2F6N A;  3N9M A;  4FJC A;  2FUU A;  3MHS A;  4BHW A;  3LQJ A;  5FER A;  2KWN A;  2YT5 A;  4WZ3 B;  4I7B A;  5G04 B;  5LKT A;  2KWO A;  2MNY A;  4IC3 A;  4LJN A;  4A4C A;  1DVP A;  1VYX A;  2YUR A;  1JM7 A;  3SOX A;  3HCU A;  4N3W A;  1JM7 B;  3N9Q A;  4XI1 A;  4GNF A;  3M63 A;  4MVT A;  2LRI C;  3EB6 A;  2K1J A;  2ZET C;  2CKL A;  1F62 A;  3M99 A;  4YBM A;  2MA6 A;  1WIM A;  2Y1M A;  4TKP B;  4GNE A;  2E6R A;  3QZV A;  1HYJ A;  2DX8 A;  1ZBD B;  3N9O A;  2YQM A;  2ECJ A;  4LAD B;  3O34 A;  5KH7 A;  2CKL B;  4R2Y A;  2L80 A;  4F52 B;  3LQI A;  4P5O B;  4ZDT A;  4V3L C;  3PHD A;  3L1Z B;  1LDK C;  2F6J A;  2XB1 A;  4GB0 A;  4A0C D;  5G0F A;  3U5N A;  4ZUX U;  2L75 A;  3O33 A;  2MD8 C;  3N9N A;  2LV9 A;  5DKA A;  5KH3 A;  5B79 A;  2FSA A;  2KU3 A;  4C9Z A;  2KE1 A;  3L1X A;  3DQV R;  2ECW A;  3ZVY A;  3M62 A;  4O64 A;  1Z60 A;  4AUQ B;  2YHN A;  4YBS A;  2YSM A;  5J3X A;  2CSZ A;  5TRB A;  2JMI A;  2VPE A;  3SHB A;  4YAX A;  1LDJ B;  4AVX A;  3RPG C;  2IDA A;  2VPG A;  2C2V S;  1CHC A;  2H0D B;  2L0B A;  1FP0 A;  1FBV A;  4UP0 A;  5I3L A;  2LXP C;  3GV4 A;  3LRQ A;  3U5P A;  5G05 B;  3MHH A;  1WEN A;  2VP7 A;  1WE9 A;  1MM3 A;  2LDR A;  2AN6 A;  2E6S A;  3SOW A;  2ECI A;  2D8S A;  2KGI A;  5TAB A;  1HYI A;  2KFT A;  2LGG A;  1IYM A;  3HTK C;  4W4U A;  1VD4 A;  2PUY A;  4R8P K;  3RPG B;  3I2D A;  4AYC B;  2YSJ A;  2VJF B;  4YBT A;  1U6G B;  4BBQ A;  3RTR B;  1Z2Q A;  5FB0 A;  2LGK A;  4UP5 A;  2K4D A;  1BOR A;  1RMD A;  4B86 C;  1E4U A;  4S3O B;  2JMJ A;  3KV5 A;  2YQL A;  4FK5 A;  3LQH A;  5DIN A;  2PNX A;  5EYA F;  2HYE D;  2H0D A;  4WA6 A;  4LLB A;  2LGV A;  5LCW B;  2EA6 A;  5C11 A;  5TBN A;  1XWH A;  2BAY A;  3EB5 A;  4YAD A;  4CA1 A;  2KRE A;  3KQI A;  2L43 A;  2VNF A;  2G45 A;  1Z6U A;  1WEE A;  3FL2 A;  3KV6 A;  3O35 A;  3O36 A;  2KWJ A;  4R7E A;  3VK6 A;  1WEP A;  2MUM A;  3V43 A;  4PTB A;  2I50 A;  4A49 A;  3GL6 A;  4YAT A;  4A4B A;  2VPB A;  4PPE A;  4GND A;  5JG6 A;  3HCS A;  1WEQ A;  2Y43 A;  3T6R A;  2FUI A;  2OXQ C;  4QF3 A;  1X4U A;  2VJF A;  4Q6F A;  1K2F A;  1T1H A;  2KIZ A;  2QJ0 A;  4AP4 A;  2JMD A;  3T7L A;  2LGL A;  2KWK A;  3L11 A;  4CCG X;  1WFK A;  2EGP A;  4LK9 A;  2KYU A;  4YAB A;  5H1T A;  3HCT A;  4I7C A; 
#chains in the Genus database with same CATH topology
 5AIU A;  2F42 A;  2YYR A;  4FIP A;  2M6M A;  2YRE A;  5KH9 A;  2RSD A;  2M3H A;  5H9M A;  2LN0 A;  5FEY A;  4LKA A;  2MNZ A;  4L58 A;  4FO9 A;  2YVR A;  4GNG A;  2Y1N A;  4UI9 B;  2QIC A;  5LKU A;  2ECN A;  2CT2 A;  2YU4 A;  1WEV A;  1WEO A;  1WES A;  3ZPV 1;  3DPL R;  3PUR A;  2G6Q A;  2CSY A;  5TDW A;  3FAN A;  2KR4 A;  4ZQL A;  2QIZ A;  2XEU A;  5AIT A;  2ECT A;  4MSX A;  5H1V A;  4NN2 A;  4WZ0 A;  2LQ6 A;  2M1R A;  2NAA A;  1MBM A;  3ZPV E;  4X3G A;  3PUQ A;  1X4I A;  4V3K C;  2KGG A;  3ZVZ B;  4B7Y C;  3PLW A;  5D1K B;  3T9K A;  1WEW A;  4AYC A;  4YC9 A;  3O7A A;  2CON A;  2L7P A;  3ZYQ A;  2ECG A;  5D1L B;  2EOD A;  2LXH C;  5B75 A;  3ASL A;  3IHP A;  1WEM A;  2UZG A;  2OWA A;  2ECV A;  3Q1D A;  3FEH A;  5SVY A;  1JOC A;  2G43 A;  2VJE B;  3U5M A;  2P57 A;  5LKX A;  1VFY A;  2XOC A;  2VJE A;  5B8D A;  5TDR A;  2HDP A;  2EGM A;  3C5K A;  5D1M B;  1N87 A;  1WIL A;  3KNV A;  2MD7 B;  4I7D A;  1V87 A;  4S3O C;  5H1U A;  5SVI B;  3O70 A;  2M85 A;  3JUE A;  5C13 A;  4QF2 A;  3LDY A;  3ZNI A;  3C6W A;  4L7X A;  3N9L A;  2JRJ A;  3U5O A;  5B78 A;  2YW8 A;  2K17 A;  2KKY A;  5B77 A;  5FB1 A;  2VPD A;  2RI7 A;  2YHO A;  1X4J A;  5K3Q A;  2MA5 A;  2MIQ A;  5B76 A;  3N9P A;  1MM2 A;  2C2L A;  3DWD A;  5LKZ A;  3NG2 A;  2MT5 A;  4WZ2 A;  2L5U A;  1WGM A;  4IC2 A;  2YUC A;  1WEU A;  3FM8 C;  3SOU A;  3O37 A;  1G25 A;  4N4F A;  2K16 A;  3ZTG A;  2F6N A;  3N9M A;  4FJC A;  2FUU A;  3MHS A;  3DDT A;  4BHW A;  3LQJ A;  5FER A;  2KWN A;  2YT5 A;  4WZ3 B;  2CRW A;  4I7B A;  5G04 B;  5LKT A;  2KWO A;  2MNY A;  4IC3 A;  4LJN A;  4A4C A;  2CRR A;  1DVP A;  1VYX A;  2YUR A;  1JM7 A;  2DJA A;  3SOX A;  3KDE C;  3HCU A;  3O47 A;  2IQJ A;  4N3W A;  3FAO A;  1JM7 B;  3N9Q A;  4XI1 A;  2KKX A;  4GNF A;  2EXU A;  3M63 A;  4MVT A;  2LRI C;  3EB6 A;  2K1J A;  2ZET C;  3LVQ E;  2CKL A;  1F62 A;  3M99 A;  4YBM A;  2MA6 A;  1WIM A;  2Y1M A;  4TKP B;  4GNE A;  2E6R A;  3QZV A;  1HYJ A;  2DX8 A;  1ZBD B;  3N9O A;  3LJU X;  2YQM A;  2ECJ A;  4LAD B;  5SVX A;  3O34 A;  5KH7 A;  2CKL B;  4R2Y A;  2L80 A;  4F52 B;  3LQI A;  4P5O B;  4ZDT A;  4V3L C;  3PHD A;  3L1Z B;  2FFW A;  1LDK C;  2F6J A;  2E61 A;  2XB1 A;  4GB0 A;  4A0C D;  5G0F A;  3U5N A;  4ZUX U;  2L75 A;  3O33 A;  2MD8 C;  3N9N A;  2LV9 A;  4OGC A;  5DKA A;  5KH3 A;  4F1P A;  5B79 A;  2FSA A;  2KU3 A;  3E2D A;  4C9Z A;  2KE1 A;  3L1X A;  3DQV R;  2ECW A;  3ZVY A;  2M13 A;  3FJU B;  3M62 A;  4O64 A;  1Z60 A;  4AUQ B;  2YHN A;  3SUB A;  4YBS A;  2YSM A;  5J3X A;  2CSZ A;  5TRB A;  2JMI A;  2VPE A;  3SHB A;  4YAX A;  1LDJ B;  4AVX A;  3RPG C;  2IDA A;  2VPG A;  4Z0R A;  2C2V S;  2DSM A;  1CHC A;  2H0D B;  2L0B A;  4Z0O A;  1FBV A;  1FP0 A;  4UP0 A;  5I3L A;  2LXP C;  3GV4 A;  3LRQ A;  3U5P A;  5G05 B;  3MHH A;  1WEN A;  4OGE A;  2VP7 A;  2FD4 A;  1WE9 A;  1MM3 A;  2LDR A;  5SVI A;  2AN6 A;  2E6S A;  3SOW A;  2ECI A;  2D8S A;  2KGI A;  5TAB A;  1HYI A;  2KFT A;  2LGG A;  1IYM A;  3HTK C;  4W4U A;  1VD4 A;  2PUY A;  4R8P K;  2MKE A;  3RPG B;  2JM3 A;  3I2D A;  4AYC B;  2YSJ A;  3H7H A;  2VJF B;  4YBT A;  1U6G B;  4BBQ A;  2CSV A;  4QQ4 A;  3RTR B;  1Z2Q A;  5FB0 A;  2LGK A;  4UP5 A;  2K4D A;  1BOR A;  1RMD A;  4B86 C;  1E4U A;  4S3O B;  2JMJ A;  3KV5 A;  1DCQ A;  2YQL A;  4FK5 A;  3LQH A;  5DIN A;  2D8U A;  2PNX A;  2LAU A;  5EYA F;  2HYE D;  2H0D A;  4WA6 A;  2JUN A;  4LLB A;  2LGV A;  2RR4 A;  5LCW B;  2EA6 A;  5C11 A;  5TBN A;  1XWH A;  2BAY A;  3EB5 A;  4YAD A;  4CA1 A;  2KRE A;  3KQI A;  2L43 A;  2VNF A;  2G45 A;  1Z6U A;  1WEE A;  2XOY A;  2XP0 A;  3FL2 A;  3KV6 A;  3LVR E;  3O35 A;  3O36 A;  2KWJ A;  4R7E A;  3VK6 A;  1WEP A;  2MUM A;  3V43 A;  4PTB A;  2I50 A;  4A49 A;  3GL6 A;  4H9D A;  4YAT A;  4A4B A;  2VPB A;  4PPE A;  4GND A;  5JG6 A;  3HCS A;  4O62 A;  1WEQ A;  2Y43 A;  3T6R A;  2FUI A;  2B0O E;  2OXQ C;  2XOZ A;  4QF3 A;  1X4U A;  3MDB C;  2VJF A;  4Q6F A;  1K2F A;  1T1H A;  2KIZ A;  2QJ0 A;  4AP4 A;  2JMD A;  3T7L A;  2LGL A;  2KWK A;  3L11 A;  4CCG X;  1WFK A;  2EGP A;  4LK9 A;  2KYU A;  4YAB A;  5H1T A;  3M7K A;  3HCT A;  4I7C A; 
#chains in the Genus database with same CATH homology
 5AIU A;  2F42 A;  2YYR A;  4FIP A;  2M6M A;  2YRE A;  5KH9 A;  2RSD A;  2M3H A;  5H9M A;  2LN0 A;  5FEY A;  4LKA A;  2MNZ A;  4L58 A;  4FO9 A;  4GNG A;  2Y1N A;  4UI9 B;  2QIC A;  5LKU A;  2ECN A;  2CT2 A;  2YU4 A;  1WEV A;  1WEO A;  1WES A;  3ZPV 1;  3DPL R;  3PUR A;  2G6Q A;  2CSY A;  5TDW A;  2KR4 A;  4ZQL A;  2QIZ A;  2XEU A;  5AIT A;  2ECT A;  4MSX A;  5H1V A;  4NN2 A;  4WZ0 A;  2LQ6 A;  2M1R A;  2NAA A;  3ZPV E;  4X3G A;  3PUQ A;  1X4I A;  4V3K C;  2KGG A;  3ZVZ B;  4B7Y C;  5D1K B;  1WEW A;  4AYC A;  4YC9 A;  3O7A A;  3ZYQ A;  2ECG A;  5D1L B;  2EOD A;  2LXH C;  5B75 A;  3ASL A;  3IHP A;  1WEM A;  2UZG A;  2ECV A;  1JOC A;  2G43 A;  2VJE B;  3U5M A;  5LKX A;  1VFY A;  2VJE A;  5B8D A;  5TDR A;  2HDP A;  3C5K A;  5D1M B;  1N87 A;  1WIL A;  3KNV A;  2MD7 B;  4I7D A;  1V87 A;  4S3O C;  5H1U A;  3O70 A;  2M85 A;  5C13 A;  4QF2 A;  3ZNI A;  3C6W A;  4L7X A;  3N9L A;  2JRJ A;  3U5O A;  5B78 A;  2YW8 A;  2K17 A;  5B77 A;  5FB1 A;  2VPD A;  2RI7 A;  2YHO A;  1X4J A;  2MA5 A;  2MIQ A;  5B76 A;  3N9P A;  1MM2 A;  2C2L A;  5LKZ A;  3NG2 A;  2MT5 A;  4WZ2 A;  2L5U A;  1WGM A;  4IC2 A;  2YUC A;  1WEU A;  3SOU A;  3O37 A;  1G25 A;  4N4F A;  2K16 A;  3ZTG A;  2F6N A;  3N9M A;  4FJC A;  2FUU A;  3MHS A;  4BHW A;  3LQJ A;  5FER A;  2KWN A;  2YT5 A;  4WZ3 B;  4I7B A;  5G04 B;  5LKT A;  2KWO A;  2MNY A;  4IC3 A;  4LJN A;  4A4C A;  1DVP A;  1VYX A;  2YUR A;  1JM7 A;  3SOX A;  3HCU A;  4N3W A;  1JM7 B;  3N9Q A;  4XI1 A;  4GNF A;  3M63 A;  4MVT A;  2LRI C;  3EB6 A;  2K1J A;  2ZET C;  2CKL A;  1F62 A;  3M99 A;  4YBM A;  2MA6 A;  1WIM A;  2Y1M A;  4TKP B;  4GNE A;  2E6R A;  3QZV A;  1HYJ A;  2DX8 A;  1ZBD B;  3N9O A;  2YQM A;  2ECJ A;  4LAD B;  3O34 A;  5KH7 A;  2CKL B;  4R2Y A;  2L80 A;  4F52 B;  3LQI A;  4P5O B;  4ZDT A;  4V3L C;  3PHD A;  3L1Z B;  1LDK C;  2F6J A;  2XB1 A;  4GB0 A;  4A0C D;  5G0F A;  3U5N A;  4ZUX U;  2L75 A;  3O33 A;  2MD8 C;  3N9N A;  2LV9 A;  5DKA A;  5KH3 A;  5B79 A;  2FSA A;  2KU3 A;  4C9Z A;  2KE1 A;  3L1X A;  3DQV R;  2ECW A;  3ZVY A;  3M62 A;  4O64 A;  1Z60 A;  4AUQ B;  2YHN A;  4YBS A;  2YSM A;  5J3X A;  2CSZ A;  5TRB A;  2JMI A;  2VPE A;  3SHB A;  4YAX A;  1LDJ B;  4AVX A;  3RPG C;  2IDA A;  2VPG A;  2C2V S;  1CHC A;  2H0D B;  2L0B A;  1FP0 A;  1FBV A;  4UP0 A;  5I3L A;  2LXP C;  3GV4 A;  3LRQ A;  3U5P A;  5G05 B;  3MHH A;  1WEN A;  2VP7 A;  1WE9 A;  1MM3 A;  2LDR A;  2AN6 A;  2E6S A;  3SOW A;  2ECI A;  2D8S A;  2KGI A;  5TAB A;  1HYI A;  2KFT A;  2LGG A;  1IYM A;  3HTK C;  4W4U A;  1VD4 A;  2PUY A;  4R8P K;  3RPG B;  3I2D A;  4AYC B;  2YSJ A;  2VJF B;  4YBT A;  1U6G B;  4BBQ A;  3RTR B;  1Z2Q A;  5FB0 A;  2LGK A;  4UP5 A;  2K4D A;  1BOR A;  1RMD A;  4B86 C;  1E4U A;  4S3O B;  2JMJ A;  3KV5 A;  2YQL A;  4FK5 A;  3LQH A;  5DIN A;  2PNX A;  5EYA F;  2HYE D;  2H0D A;  4WA6 A;  4LLB A;  2LGV A;  5LCW B;  2EA6 A;  5C11 A;  5TBN A;  1XWH A;  2BAY A;  3EB5 A;  4YAD A;  4CA1 A;  2KRE A;  3KQI A;  2L43 A;  2VNF A;  2G45 A;  1Z6U A;  1WEE A;  3FL2 A;  3KV6 A;  3O35 A;  3O36 A;  2KWJ A;  4R7E A;  3VK6 A;  1WEP A;  2MUM A;  3V43 A;  4PTB A;  2I50 A;  4A49 A;  3GL6 A;  4YAT A;  4A4B A;  2VPB A;  4PPE A;  4GND A;  5JG6 A;  3HCS A;  1WEQ A;  2Y43 A;  3T6R A;  2FUI A;  2OXQ C;  4QF3 A;  1X4U A;  2VJF A;  4Q6F A;  1K2F A;  1T1H A;  2KIZ A;  2QJ0 A;  4AP4 A;  2JMD A;  3T7L A;  2LGL A;  2KWK A;  3L11 A;  4CCG X;  1WFK A;  2EGP A;  4LK9 A;  2KYU A;  4YAB A;  5H1T A;  3HCT A;  4I7C A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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