2QJ0A

Structure of the yeast u-box-containing ubiquitin ligase ufd2p
Total Genus 318
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
318
sequence length
957
structure length
937
Chain Sequence
GSEFRSMTAIEDILQITTDPSDTRGYSLLKSLGVDFIDTLLLYQLTENEKLDKPFEYLNDCFRRNQQQKRITKNKPNAESLHSTFQEIDRLVIGYGVVALQIENFCMNGAFINYITGIVSNVNSYTDFLSQIIQRAILEGTALDLLNAVFPTLLEYCNKHVSHFDLNESVIYNNVLTIFELFVTFKPIAEIFTKIDGFFADYSCKPQDFERKTILGPILSLSPIEAAVAIRNYGDNLLRSKQQTAMIHESLQAEHKVVIDRLFFIVDKLVRGSLNSRTDMISYFAHIANKNHLRRADHPPFKELSSNGFMSNITLLLVRFSQPFLDISYKKIDKIDANYFNNPSLFIDLSGETRLNSDFKEADAFYDKNRKTADSKPNFISDCFFLTLTYLHYGLGGTLSFEEKMGSEIKALKEEIEKVKKIAANHDVFARFITAQLSKMEKALKTTESLRFALQGFFAHRSLQLEVFDFICGASTFLIRVVDPEHEFPFKQIKLPLIPDQIGVENVDNADFLRAHAPVPFKYYPEFVVEGPVNYSLYISKYQTSPIFRNPRLGSFVEFTTMVLRCPELVSNPHLKGKLVQLLSVGAMPLTDNSPGFMMDIFEHDELVNKNLLYALLDFYVIVEKTGSSSQFYDKFNSRYSISIILEELYYKIPSYKNQLIWQSQNNADFFVRFVARMLNDLTFLLDEGLSNLAEVHNIQNELDEDKELQTRLASASRQAKSSCGLADKSMKLFEIYSKDIPAAFVTPEIVYRLASMLNYNLESLVGPKCGELKVKDPQSYSFNPKDLLKALTTVYINLSEQSEFISAVAKDERSFNRNLFVRAVDILGRKTGLASPEFIEKLLNFANKAEEQRKADEEEDLEYGDVPDEFLDPLMYTIMKDPVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDVTPNEELRQKILCFKKQK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Inaugural Article: Structure and function of the yeast U-box-containing ubiquitin ligase Ufd2p.
pubmed doi rcsb
source organism Saccharomyces cerevisiae
molecule tags Ligase
molecule keywords Ubiquitin conjugation factor E4
total genus 318
structure length 937
sequence length 957
ec nomenclature ec 2.3.2.27: RING-type E3 ubiquitin transferase.
pdb deposition date 2007-07-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF04564 U-box U-box domain
A PF10408 Ufd2P_core Ubiquitin elongating factor core
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.40.10 Alpha Beta 2-Layer Sandwich Herpes Virus-1 Zinc/RING finger domain, C3HC4 (zinc finger) 2qj0A02
2HDPA 1XWHA 2H0DB 2FUUA 5KH7A 2F6NA 4B86C 5KH3A 2L5UA 3MHHA 4GNFA 3ZPVE 1G25A 1Z60A 2H0DA 2YHNA 3SOWA 3U5MA 2YSMA 2M3HA 1WEMA 3RTRB 3N9MA 5TRBA 3VK6A 2MA5A 2XB1A 1E4UA 4WZ0A 2CSZA 2VPEA 2Y43A 3NG2A 2ECGA 3ZNIA 5LCWB 3HTKC 3IHPA 3N9LA 2L43A 2NAAA 1N87A 2JMIA 3KV6A 1X4IA 2ECVA 2YSJA 2JRJA 1WENA 2BAYA 4YBMA 5FB0A 3O36A 3GV4A 2ECJA 2YQMA 2ECTA 4YAXA 1V87A 4R8PK 2F6JA 4A0CD 5LKUA 2CKLB 3O34A 2HYED 4LK9A 2ECIA 2ECWA 2AN6A 4IC2A 1K2FA 1DVPA 3V43A 5KH9A 2M85A 1LDJB 2ECNA 3LQJA 4A4CA 1X4JA 5D1MB 4CA1A 3HCSA 2K4DA 2YT5A 3N9PA 2KIZA 5TDWA 2KGIA 2VPDA 4UI9B 2DX8A 3T6RA 2LRIC 4X3GA 3SHBA 3C6WA 5B77A 1WFKA 2K1JA 5B8DA 1MM2A 4BBQA 2MNYA 4ZDTA 1U6GB 1Z2QA 5FEYA 4UP5A 2C2VS 4A49A 3RPGC 2Y1NA 4FO9A 2YURA 2KWOA 4PPEA 1JM7A 5B76A 2G45A 3KNVA 5TBNA 2JMDA 2XEUA 2VJEB 4L58A 2OXQC 4UP0A 3U5OA 3SOUA 5B79A 3ZTGA 2QICA 4S3OB 5G04B 2YQLA 3HCUA 1F62A 3ASLA 2G6QA 2YW8A 2JMJA 3HCTA 3DQVR 2LQ6A 5TABA 2LGGA 2RI7A 5DINA 4W4UA 3N9QA 2MNZA 1HYJA 2I50A 5G05B 1WEPA 2KYUA 4LKAA 2E6RA 2FUIA 5DKAA 1VYXA 3M62A 2IDAA 2C2LA 2E6SA 1WILA 2QJ0A 4ZQLA 3M99A 5JG6A 3L11A 2G43A 5I3LA 2MD8C 5H1UA 5LKXA 4V3LC 2RSDA 2EGPA 2KWNA 3ZVYA 4AYCA 4N3WA 2EODA 2K17A 3L1XA 3QZVA 4S3OC 4MSXA 4GNDA 4R7EA 2D8SA 4AUQB 1T1HA 5LKZA 1WEQA 2CSYA 1FP0A 2KU3A 2Y1MA 2KWJA 5FERA 3PHDA 2YREA 4WZ3B 4WA6A 2FSAA 2VPBA 4GB0A 1X4UA 2KFTA 2LDRA 4C9ZA 2MT5A 3U5NA 4I7BA 4AYCB 2MUMA 2VJFB 2LXHC 3ZPV1 5G0FA 4A4BA 5H1TA 2KGGA 4FJCA 1WEEA 3ZVZB 3O35A 2KE1A 2LGLA 4BHWA 1BORA 3C5KA 2PUYA 3RPGB 4LJNA 4TKPB 4I7CA 4QF3A 5H1VA 2CKLA 1IYMA 2M6MA 4Q6FA 3KV5A 5EYAF 3ZYQA 4MVTA 2LXPC 4YATA 3EB6A 4I7DA 3N9NA 5J3XA 2LGVA 4P5OB 1WE9A 1WEVA 4YABA 3L1ZB 2K16A 2F42A 3LQHA 1ZBDB 4XI1A 2M1RA 5AITA 1VFYA 3DPLR 1JM7B 2YU4A 3M63A 3U5PA 2VNFA 4FK5A 2MA6A 4YC9A 1FBVA 4F52B 3O70A 3SOXA 1VD4A 3T7LA 1WGMA 4IC3A 4AP4A 4GNGA 4YBSA 4FIPA 5C11A 5FB1A 4LADB 2YUCA 2EA6A 4PTBA 4CCGX 2LN0A 1RMDA 3MHSA 4L7XA 3N9OA 2MD7B 2UZGA 4WZ2A 2L75A 3FL2A 4QF2A 1WEUA 2PNXA 3PURA 1JOCA 5C13A 2VP7A 4V3KC 4N4FA 2LGKA 5TDRA 4AVXA 1WESA 5AIUA 3PUQA 5H9MA 4B7YC 4O64A 1MM3A 4LLBA 2YHOA 2VPGA 4YADA 3GL6A 4ZUXU 1WEWA 1CHCA 3O7AA 4GNEA 4NN2A 1WIMA 5D1KB 2L80A 2L0BA 3O33A 2MIQA 2VJEA 3LQIA 5LKTA 1WEOA 5D1LB 2CT2A 3KQIA 3O37A 2VJFA 2YYRA 1HYIA 2QIZA 4R2YA 5B75A 5B78A 1Z6UA 2KR4A 2KREA 3EB5A 2KWKA 4YBTA 2ZETC 1LDKC 2LV9A 3I2DA 3LRQA
chains in the Genus database with same CATH superfamily
2HDPA 1XWHA 2H0DB 2FUUA 5KH7A 2F6NA 4B86C 5KH3A 2L5UA 3MHHA 4OGEA 4GNFA 3ZPVE 1G25A 2EGMA 2IQJA 1Z60A 2H0DA 2YHNA 3SOWA 3U5MA 2YSMA 2M3HA 1WEMA 3RTRB 3N9MA 5TRBA 3VK6A 2MA5A 2XB1A 1E4UA 4WZ0A 2CSZA 2VPEA 2Y43A 3NG2A 2ECGA 3FAOA 3ZNIA 5LCWB 3HTKC 3IHPA 3N9LA 2L43A 2NAAA 1N87A 2JMIA 3KV6A 1X4IA 2ECVA 2YSJA 2JRJA 1WENA 2BAYA 4YBMA 2XP0A 5FB0A 2CRWA 3O36A 3GV4A 2ECJA 2YQMA 2ECTA 3E2DA 4YAXA 1V87A 4R8PK 2F6JA 4A0CD 5LKUA 2CKLB 3O34A 2HYED 4LK9A 2ECIA 2ECWA 3JUEA 2AN6A 4IC2A 2JUNA 1K2FA 1DVPA 2XOCA 3V43A 5KH9A 2M85A 1LDJB 2ECNA 3LQJA 4A4CA 1X4JA 5D1MB 4CA1A 3HCSA 2KKYA 3FEHA 2K4DA 2YT5A 3N9PA 2KIZA 5TDWA 2KGIA 2VPDA 4UI9B 2DX8A 3T6RA 2LRIC 4X3GA 3SHBA 3C6WA 5B77A 1WFKA 2K1JA 5B8DA 1MM2A 2CRRA 4BBQA 2MNYA 4ZDTA 1U6GB 1Z2QA 5K3QA 5FEYA 4UP5A 2C2VS 4A49A 2FFWA 3RPGC 2Y1NA 4FO9A 4H9DA 2YURA 2KWOA 4PPEA 1JM7A 4Z0RA 5B76A 2G45A 2L7PA 2JM3A 3KNVA 5TBNA 2JMDA 3Q1DA 2XEUA 2VJEB 2OWAA 3M7KA 4L58A 2OXQC 4UP0A 3U5OA 3SOUA 5B79A 3ZTGA 2QICA 4S3OB 5G04B 2YQLA 3H7HA 3HCUA 4OGCA 1F62A 3ASLA 2G6QA 2YW8A 2JMJA 3HCTA 4F1PA 3DQVR 2LQ6A 5TABA 2LGGA 2RI7A 5DINA 4W4UA 3N9QA 2MNZA 2CONA 1HYJA 5SVIA 2I50A 5G05B 1WEPA 2KYUA 4LKAA 2E6RA 2FUIA 3LDYA 5DKAA 1VYXA 4O62A 3M62A 2IDAA 2C2LA 2E6SA 4ZQLA 1WILA 2QJ0A 3M99A 2XOYA 3L11A 5JG6A 2G43A 5I3LA 2MD8C 2EXUA 5H1UA 5LKXA 4V3LC 2RSDA 2EGPA 2KWNA 3ZVYA 4AYCA 4N3WA 3DDTA 2EODA 2K17A 3L1XA 3QZVA 4S3OC 2RR4A 4MSXA 4GNDA 4R7EA 1MBMA 5SVXA 2D8SA 2MKEA 4AUQB 1T1HA 5LKZA 1WEQA 2CSYA 1FP0A 2D8UA 2KU3A 2Y1MA 2KWJA 5FERA 3FANA 2B0OE 3PHDA 2YREA 4WZ3B 4WA6A 2FSAA 2FD4A 2VPBA 4GB0A 1X4UA 2KFTA 2LDRA 3LJUX 3PLWA 4C9ZA 2MT5A 3U5NA 4I7BA 2CSVA 5SVYA 3FM8C 3DWDA 4AYCB 2MUMA 2VJFB 2LXHC 3ZPV1 5G0FA 4A4BA 5H1TA 2KGGA 4FJCA 1WEEA 3ZVZB 3O35A 2KE1A 2LGLA 4BHWA 1BORA 3C5KA 2PUYA 3RPGB 4LJNA 3T9KA 4TKPB 4I7CA 4Z0OA 4QF3A 5H1VA 2CKLA 1IYMA 2M6MA 4Q6FA 2DSMA 3KV5A 5EYAF 3ZYQA 4MVTA 2LXPC 4YATA 3EB6A 4I7DA 3N9NA 5J3XA 2XOZA 2LGVA 4P5OB 1WE9A 1WEVA 4YABA 3L1ZB 4QQ4A 2K16A 2F42A 3LQHA 2P57A 2YVRA 1ZBDB 4XI1A 2M1RA 5AITA 1VFYA 2DJAA 3DPLR 1JM7B 2YU4A 3M63A 3U5PA 2VNFA 4FK5A 2MA6A 5SVIB 3LVRE 4YC9A 1FBVA 4F52B 3O70A 3SOXA 1VD4A 3T7LA 1WGMA 4IC3A 4AP4A 2KKXA 4GNGA 2LAUA 4YBSA 4FIPA 5C11A 5FB1A 4LADB 2YUCA 2EA6A 4PTBA 4CCGX 2LN0A 1RMDA 3MHSA 4L7XA 3N9OA 2MD7B 2UZGA 4WZ2A 2L75A 3FL2A 4QF2A 1WEUA 3KDEC 2PNXA 3PURA 1JOCA 5C13A 2VP7A 4V3KC 4N4FA 2LGKA 3LVQE 5TDRA 4AVXA 2M13A 1WESA 3FJUB 3O47A 5AIUA 3PUQA 5H9MA 4B7YC 4O64A 1MM3A 4LLBA 2YHOA 2VPGA 4YADA 3GL6A 4ZUXU 3SUBA 1WEWA 1CHCA 3MDBC 3O7AA 4GNEA 2E61A 4NN2A 1WIMA 5D1KB 2L80A 2L0BA 3O33A 2MIQA 2VJEA 3LQIA 5LKTA 1WEOA 5D1LB 2CT2A 3KQIA 3O37A 2VJFA 2YYRA 1HYIA 2QIZA 4R2YA 5B75A 5B78A 1Z6UA 2KR4A 2KREA 3EB5A 1DCQA 2KWKA 4YBTA 2ZETC 1LDKC 2LV9A 3I2DA 3LRQA
chains in the Genus database with same CATH topology
2HDPA 1XWHA 2H0DB 2FUUA 5KH7A 2F6NA 4B86C 5KH3A 2L5UA 3MHHA 4GNFA 3ZPVE 1G25A 1Z60A 2H0DA 2YHNA 3SOWA 3U5MA 2YSMA 2M3HA 1WEMA 3RTRB 3N9MA 5TRBA 3VK6A 2MA5A 2XB1A 1E4UA 4WZ0A 2CSZA 2VPEA 2Y43A 3NG2A 2ECGA 3ZNIA 5LCWB 3HTKC 3IHPA 3N9LA 2L43A 2NAAA 1N87A 2JMIA 3KV6A 1X4IA 2ECVA 2YSJA 2JRJA 1WENA 2BAYA 4YBMA 5FB0A 3O36A 3GV4A 2ECJA 2YQMA 2ECTA 4YAXA 1V87A 4R8PK 2F6JA 4A0CD 5LKUA 2CKLB 3O34A 2HYED 4LK9A 2ECIA 2ECWA 2AN6A 4IC2A 1K2FA 1DVPA 3V43A 5KH9A 2M85A 1LDJB 2ECNA 3LQJA 4A4CA 1X4JA 5D1MB 4CA1A 3HCSA 2K4DA 2YT5A 3N9PA 2KIZA 5TDWA 2KGIA 2VPDA 4UI9B 2DX8A 3T6RA 2LRIC 4X3GA 3SHBA 3C6WA 5B77A 1WFKA 2K1JA 5B8DA 1MM2A 4BBQA 2MNYA 4ZDTA 1U6GB 1Z2QA 5FEYA 4UP5A 2C2VS 4A49A 3RPGC 2Y1NA 4FO9A 2YURA 2KWOA 4PPEA 1JM7A 5B76A 2G45A 3KNVA 5TBNA 2JMDA 2XEUA 2VJEB 4L58A 2OXQC 4UP0A 3U5OA 3SOUA 5B79A 3ZTGA 2QICA 4S3OB 5G04B 2YQLA 3HCUA 1F62A 3ASLA 2G6QA 2YW8A 2JMJA 3HCTA 3DQVR 2LQ6A 5TABA 2LGGA 2RI7A 5DINA 4W4UA 3N9QA 2MNZA 1HYJA 2I50A 5G05B 1WEPA 2KYUA 4LKAA 2E6RA 2FUIA 5DKAA 1VYXA 3M62A 2IDAA 2C2LA 2E6SA 1WILA 2QJ0A 4ZQLA 3M99A 5JG6A 3L11A 2G43A 5I3LA 2MD8C 5H1UA 5LKXA 4V3LC 2RSDA 2EGPA 2KWNA 3ZVYA 4AYCA 4N3WA 2EODA 2K17A 3L1XA 3QZVA 4S3OC 4MSXA 4GNDA 4R7EA 2D8SA 4AUQB 1T1HA 5LKZA 1WEQA 2CSYA 1FP0A 2KU3A 2Y1MA 2KWJA 5FERA 3PHDA 2YREA 4WZ3B 4WA6A 2FSAA 2VPBA 4GB0A 1X4UA 2KFTA 2LDRA 4C9ZA 2MT5A 3U5NA 4I7BA 4AYCB 2MUMA 2VJFB 2LXHC 3ZPV1 5G0FA 4A4BA 5H1TA 2KGGA 4FJCA 1WEEA 3ZVZB 3O35A 2KE1A 2LGLA 4BHWA 1BORA 3C5KA 2PUYA 3RPGB 4LJNA 4TKPB 4I7CA 4QF3A 5H1VA 2CKLA 1IYMA 2M6MA 4Q6FA 3KV5A 5EYAF 3ZYQA 4MVTA 2LXPC 4YATA 3EB6A 4I7DA 3N9NA 5J3XA 2LGVA 4P5OB 1WE9A 1WEVA 4YABA 3L1ZB 2K16A 2F42A 3LQHA 1ZBDB 4XI1A 2M1RA 5AITA 1VFYA 3DPLR 1JM7B 2YU4A 3M63A 3U5PA 2VNFA 4FK5A 2MA6A 4YC9A 1FBVA 4F52B 3O70A 3SOXA 1VD4A 3T7LA 1WGMA 4IC3A 4AP4A 4GNGA 4YBSA 4FIPA 5C11A 5FB1A 4LADB 2YUCA 2EA6A 4PTBA 4CCGX 2LN0A 1RMDA 3MHSA 4L7XA 3N9OA 2MD7B 2UZGA 4WZ2A 2L75A 3FL2A 4QF2A 1WEUA 2PNXA 3PURA 1JOCA 5C13A 2VP7A 4V3KC 4N4FA 2LGKA 5TDRA 4AVXA 1WESA 5AIUA 3PUQA 5H9MA 4B7YC 4O64A 1MM3A 4LLBA 2YHOA 2VPGA 4YADA 3GL6A 4ZUXU 1WEWA 1CHCA 3O7AA 4GNEA 4NN2A 1WIMA 5D1KB 2L80A 2L0BA 3O33A 2MIQA 2VJEA 3LQIA 5LKTA 1WEOA 5D1LB 2CT2A 3KQIA 3O37A 2VJFA 2YYRA 1HYIA 2QIZA 4R2YA 5B75A 5B78A 1Z6UA 2KR4A 2KREA 3EB5A 2KWKA 4YBTA 2ZETC 1LDKC 2LV9A 3I2DA 3LRQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2HDP A;  1XWH A;  2H0D B;  2FUU A;  5KH7 A;  2F6N A;  4B86 C;  5KH3 A;  2L5U A;  3MHH A;  4GNF A;  3ZPV E;  1G25 A;  1Z60 A;  2H0D A;  2YHN A;  3SOW A;  3U5M A;  2YSM A;  2M3H A;  1WEM A;  3RTR B;  3N9M A;  5TRB A;  3VK6 A;  2MA5 A;  2XB1 A;  1E4U A;  4WZ0 A;  2CSZ A;  2VPE A;  2Y43 A;  3NG2 A;  2ECG A;  3ZNI A;  5LCW B;  3HTK C;  3IHP A;  3N9L A;  2L43 A;  2NAA A;  1N87 A;  2JMI A;  3KV6 A;  1X4I A;  2ECV A;  2YSJ A;  2JRJ A;  1WEN A;  2BAY A;  4YBM A;  5FB0 A;  3O36 A;  3GV4 A;  2ECJ A;  2YQM A;  2ECT A;  4YAX A;  1V87 A;  4R8P K;  2F6J A;  4A0C D;  5LKU A;  2CKL B;  3O34 A;  2HYE D;  4LK9 A;  2ECI A;  2ECW A;  2AN6 A;  4IC2 A;  1K2F A;  1DVP A;  3V43 A;  5KH9 A;  2M85 A;  1LDJ B;  2ECN A;  3LQJ A;  4A4C A;  1X4J A;  5D1M B;  4CA1 A;  3HCS A;  2K4D A;  2YT5 A;  3N9P A;  2KIZ A;  5TDW A;  2KGI A;  2VPD A;  4UI9 B;  2DX8 A;  3T6R A;  2LRI C;  4X3G A;  3SHB A;  3C6W A;  5B77 A;  1WFK A;  2K1J A;  5B8D A;  1MM2 A;  4BBQ A;  2MNY A;  4ZDT A;  1U6G B;  1Z2Q A;  5FEY A;  4UP5 A;  2C2V S;  4A49 A;  3RPG C;  2Y1N A;  4FO9 A;  2YUR A;  2KWO A;  4PPE A;  1JM7 A;  5B76 A;  2G45 A;  3KNV A;  5TBN A;  2JMD A;  2XEU A;  2VJE B;  4L58 A;  2OXQ C;  4UP0 A;  3U5O A;  3SOU A;  5B79 A;  3ZTG A;  2QIC A;  4S3O B;  5G04 B;  2YQL A;  3HCU A;  1F62 A;  3ASL A;  2G6Q A;  2YW8 A;  2JMJ A;  3HCT A;  3DQV R;  2LQ6 A;  5TAB A;  2LGG A;  2RI7 A;  5DIN A;  4W4U A;  3N9Q A;  2MNZ A;  1HYJ A;  2I50 A;  5G05 B;  1WEP A;  2KYU A;  4LKA A;  2E6R A;  2FUI A;  5DKA A;  1VYX A;  3M62 A;  2IDA A;  2C2L A;  2E6S A;  1WIL A;  2QJ0 A;  4ZQL A;  3M99 A;  5JG6 A;  3L11 A;  2G43 A;  5I3L A;  2MD8 C;  5H1U A;  5LKX A;  4V3L C;  2RSD A;  2EGP A;  2KWN A;  3ZVY A;  4AYC A;  4N3W A;  2EOD A;  2K17 A;  3L1X A;  3QZV A;  4S3O C;  4MSX A;  4GND A;  4R7E A;  2D8S A;  4AUQ B;  1T1H A;  5LKZ A;  1WEQ A;  2CSY A;  1FP0 A;  2KU3 A;  2Y1M A;  2KWJ A;  5FER A;  3PHD A;  2YRE A;  4WZ3 B;  4WA6 A;  2FSA A;  2VPB A;  4GB0 A;  1X4U A;  2KFT A;  2LDR A;  4C9Z A;  2MT5 A;  3U5N A;  4I7B A;  4AYC B;  2MUM A;  2VJF B;  2LXH C;  3ZPV 1;  5G0F A;  4A4B A;  5H1T A;  2KGG A;  4FJC A;  1WEE A;  3ZVZ B;  3O35 A;  2KE1 A;  2LGL A;  4BHW A;  1BOR A;  3C5K A;  2PUY A;  3RPG B;  4LJN A;  4TKP B;  4I7C A;  4QF3 A;  5H1V A;  2CKL A;  1IYM A;  2M6M A;  4Q6F A;  3KV5 A;  5EYA F;  3ZYQ A;  4MVT A;  2LXP C;  4YAT A;  3EB6 A;  4I7D A;  3N9N A;  5J3X A;  2LGV A;  4P5O B;  1WE9 A;  1WEV A;  4YAB A;  3L1Z B;  2K16 A;  2F42 A;  3LQH A;  1ZBD B;  4XI1 A;  2M1R A;  5AIT A;  1VFY A;  3DPL R;  1JM7 B;  2YU4 A;  3M63 A;  3U5P A;  2VNF A;  4FK5 A;  2MA6 A;  4YC9 A;  1FBV A;  4F52 B;  3O70 A;  3SOX A;  1VD4 A;  3T7L A;  1WGM A;  4IC3 A;  4AP4 A;  4GNG A;  4YBS A;  4FIP A;  5C11 A;  5FB1 A;  4LAD B;  2YUC A;  2EA6 A;  4PTB A;  4CCG X;  2LN0 A;  1RMD A;  3MHS A;  4L7X A;  3N9O A;  2MD7 B;  2UZG A;  4WZ2 A;  2L75 A;  3FL2 A;  4QF2 A;  1WEU A;  2PNX A;  3PUR A;  1JOC A;  5C13 A;  2VP7 A;  4V3K C;  4N4F A;  2LGK A;  5TDR A;  4AVX A;  1WES A;  5AIU A;  3PUQ A;  5H9M A;  4B7Y C;  4O64 A;  1MM3 A;  4LLB A;  2YHO A;  2VPG A;  4YAD A;  3GL6 A;  4ZUX U;  1WEW A;  1CHC A;  3O7A A;  4GNE A;  4NN2 A;  1WIM A;  5D1K B;  2L80 A;  2L0B A;  3O33 A;  2MIQ A;  2VJE A;  3LQI A;  5LKT A;  1WEO A;  5D1L B;  2CT2 A;  3KQI A;  3O37 A;  2VJF A;  2YYR A;  1HYI A;  2QIZ A;  4R2Y A;  5B75 A;  5B78 A;  1Z6U A;  2KR4 A;  2KRE A;  3EB5 A;  2KWK A;  4YBT A;  2ZET C;  1LDK C;  2LV9 A;  3I2D A;  3LRQ A; 
#chains in the Genus database with same CATH topology
 2HDP A;  1XWH A;  2H0D B;  2FUU A;  5KH7 A;  2F6N A;  4B86 C;  5KH3 A;  2L5U A;  3MHH A;  4OGE A;  4GNF A;  3ZPV E;  1G25 A;  2EGM A;  2IQJ A;  1Z60 A;  2H0D A;  2YHN A;  3SOW A;  3U5M A;  2YSM A;  2M3H A;  1WEM A;  3RTR B;  3N9M A;  5TRB A;  3VK6 A;  2MA5 A;  2XB1 A;  1E4U A;  4WZ0 A;  2CSZ A;  2VPE A;  2Y43 A;  3NG2 A;  2ECG A;  3FAO A;  3ZNI A;  5LCW B;  3HTK C;  3IHP A;  3N9L A;  2L43 A;  2NAA A;  1N87 A;  2JMI A;  3KV6 A;  1X4I A;  2ECV A;  2YSJ A;  2JRJ A;  1WEN A;  2BAY A;  4YBM A;  2XP0 A;  5FB0 A;  2CRW A;  3O36 A;  3GV4 A;  2ECJ A;  2YQM A;  2ECT A;  3E2D A;  4YAX A;  1V87 A;  4R8P K;  2F6J A;  4A0C D;  5LKU A;  2CKL B;  3O34 A;  2HYE D;  4LK9 A;  2ECI A;  2ECW A;  3JUE A;  2AN6 A;  4IC2 A;  2JUN A;  1K2F A;  1DVP A;  2XOC A;  3V43 A;  5KH9 A;  2M85 A;  1LDJ B;  2ECN A;  3LQJ A;  4A4C A;  1X4J A;  5D1M B;  4CA1 A;  3HCS A;  2KKY A;  3FEH A;  2K4D A;  2YT5 A;  3N9P A;  2KIZ A;  5TDW A;  2KGI A;  2VPD A;  4UI9 B;  2DX8 A;  3T6R A;  2LRI C;  4X3G A;  3SHB A;  3C6W A;  5B77 A;  1WFK A;  2K1J A;  5B8D A;  1MM2 A;  2CRR A;  4BBQ A;  2MNY A;  4ZDT A;  1U6G B;  1Z2Q A;  5K3Q A;  5FEY A;  4UP5 A;  2C2V S;  4A49 A;  2FFW A;  3RPG C;  2Y1N A;  4FO9 A;  4H9D A;  2YUR A;  2KWO A;  4PPE A;  1JM7 A;  4Z0R A;  5B76 A;  2G45 A;  2L7P A;  2JM3 A;  3KNV A;  5TBN A;  2JMD A;  3Q1D A;  2XEU A;  2VJE B;  2OWA A;  3M7K A;  4L58 A;  2OXQ C;  4UP0 A;  3U5O A;  3SOU A;  5B79 A;  3ZTG A;  2QIC A;  4S3O B;  5G04 B;  2YQL A;  3H7H A;  3HCU A;  4OGC A;  1F62 A;  3ASL A;  2G6Q A;  2YW8 A;  2JMJ A;  3HCT A;  4F1P A;  3DQV R;  2LQ6 A;  5TAB A;  2LGG A;  2RI7 A;  5DIN A;  4W4U A;  3N9Q A;  2MNZ A;  2CON A;  1HYJ A;  5SVI A;  2I50 A;  5G05 B;  1WEP A;  2KYU A;  4LKA A;  2E6R A;  2FUI A;  3LDY A;  5DKA A;  1VYX A;  4O62 A;  3M62 A;  2IDA A;  2C2L A;  2E6S A;  4ZQL A;  1WIL A;  2QJ0 A;  3M99 A;  2XOY A;  3L11 A;  5JG6 A;  2G43 A;  5I3L A;  2MD8 C;  2EXU A;  5H1U A;  5LKX A;  4V3L C;  2RSD A;  2EGP A;  2KWN A;  3ZVY A;  4AYC A;  4N3W A;  3DDT A;  2EOD A;  2K17 A;  3L1X A;  3QZV A;  4S3O C;  2RR4 A;  4MSX A;  4GND A;  4R7E A;  1MBM A;  5SVX A;  2D8S A;  2MKE A;  4AUQ B;  1T1H A;  5LKZ A;  1WEQ A;  2CSY A;  1FP0 A;  2D8U A;  2KU3 A;  2Y1M A;  2KWJ A;  5FER A;  3FAN A;  2B0O E;  3PHD A;  2YRE A;  4WZ3 B;  4WA6 A;  2FSA A;  2FD4 A;  2VPB A;  4GB0 A;  1X4U A;  2KFT A;  2LDR A;  3LJU X;  3PLW A;  4C9Z A;  2MT5 A;  3U5N A;  4I7B A;  2CSV A;  5SVY A;  3FM8 C;  3DWD A;  4AYC B;  2MUM A;  2VJF B;  2LXH C;  3ZPV 1;  5G0F A;  4A4B A;  5H1T A;  2KGG A;  4FJC A;  1WEE A;  3ZVZ B;  3O35 A;  2KE1 A;  2LGL A;  4BHW A;  1BOR A;  3C5K A;  2PUY A;  3RPG B;  4LJN A;  3T9K A;  4TKP B;  4I7C A;  4Z0O A;  4QF3 A;  5H1V A;  2CKL A;  1IYM A;  2M6M A;  4Q6F A;  2DSM A;  3KV5 A;  5EYA F;  3ZYQ A;  4MVT A;  2LXP C;  4YAT A;  3EB6 A;  4I7D A;  3N9N A;  5J3X A;  2XOZ A;  2LGV A;  4P5O B;  1WE9 A;  1WEV A;  4YAB A;  3L1Z B;  4QQ4 A;  2K16 A;  2F42 A;  3LQH A;  2P57 A;  2YVR A;  1ZBD B;  4XI1 A;  2M1R A;  5AIT A;  1VFY A;  2DJA A;  3DPL R;  1JM7 B;  2YU4 A;  3M63 A;  3U5P A;  2VNF A;  4FK5 A;  2MA6 A;  5SVI B;  3LVR E;  4YC9 A;  1FBV A;  4F52 B;  3O70 A;  3SOX A;  1VD4 A;  3T7L A;  1WGM A;  4IC3 A;  4AP4 A;  2KKX A;  4GNG A;  2LAU A;  4YBS A;  4FIP A;  5C11 A;  5FB1 A;  4LAD B;  2YUC A;  2EA6 A;  4PTB A;  4CCG X;  2LN0 A;  1RMD A;  3MHS A;  4L7X A;  3N9O A;  2MD7 B;  2UZG A;  4WZ2 A;  2L75 A;  3FL2 A;  4QF2 A;  1WEU A;  3KDE C;  2PNX A;  3PUR A;  1JOC A;  5C13 A;  2VP7 A;  4V3K C;  4N4F A;  2LGK A;  3LVQ E;  5TDR A;  4AVX A;  2M13 A;  1WES A;  3FJU B;  3O47 A;  5AIU A;  3PUQ A;  5H9M A;  4B7Y C;  4O64 A;  1MM3 A;  4LLB A;  2YHO A;  2VPG A;  4YAD A;  3GL6 A;  4ZUX U;  3SUB A;  1WEW A;  1CHC A;  3MDB C;  3O7A A;  4GNE A;  2E61 A;  4NN2 A;  1WIM A;  5D1K B;  2L80 A;  2L0B A;  3O33 A;  2MIQ A;  2VJE A;  3LQI A;  5LKT A;  1WEO A;  5D1L B;  2CT2 A;  3KQI A;  3O37 A;  2VJF A;  2YYR A;  1HYI A;  2QIZ A;  4R2Y A;  5B75 A;  5B78 A;  1Z6U A;  2KR4 A;  2KRE A;  3EB5 A;  1DCQ A;  2KWK A;  4YBT A;  2ZET C;  1LDK C;  2LV9 A;  3I2D A;  3LRQ A; 
#chains in the Genus database with same CATH homology
 2HDP A;  1XWH A;  2H0D B;  2FUU A;  5KH7 A;  2F6N A;  4B86 C;  5KH3 A;  2L5U A;  3MHH A;  4GNF A;  3ZPV E;  1G25 A;  1Z60 A;  2H0D A;  2YHN A;  3SOW A;  3U5M A;  2YSM A;  2M3H A;  1WEM A;  3RTR B;  3N9M A;  5TRB A;  3VK6 A;  2MA5 A;  2XB1 A;  1E4U A;  4WZ0 A;  2CSZ A;  2VPE A;  2Y43 A;  3NG2 A;  2ECG A;  3ZNI A;  5LCW B;  3HTK C;  3IHP A;  3N9L A;  2L43 A;  2NAA A;  1N87 A;  2JMI A;  3KV6 A;  1X4I A;  2ECV A;  2YSJ A;  2JRJ A;  1WEN A;  2BAY A;  4YBM A;  5FB0 A;  3O36 A;  3GV4 A;  2ECJ A;  2YQM A;  2ECT A;  4YAX A;  1V87 A;  4R8P K;  2F6J A;  4A0C D;  5LKU A;  2CKL B;  3O34 A;  2HYE D;  4LK9 A;  2ECI A;  2ECW A;  2AN6 A;  4IC2 A;  1K2F A;  1DVP A;  3V43 A;  5KH9 A;  2M85 A;  1LDJ B;  2ECN A;  3LQJ A;  4A4C A;  1X4J A;  5D1M B;  4CA1 A;  3HCS A;  2K4D A;  2YT5 A;  3N9P A;  2KIZ A;  5TDW A;  2KGI A;  2VPD A;  4UI9 B;  2DX8 A;  3T6R A;  2LRI C;  4X3G A;  3SHB A;  3C6W A;  5B77 A;  1WFK A;  2K1J A;  5B8D A;  1MM2 A;  4BBQ A;  2MNY A;  4ZDT A;  1U6G B;  1Z2Q A;  5FEY A;  4UP5 A;  2C2V S;  4A49 A;  3RPG C;  2Y1N A;  4FO9 A;  2YUR A;  2KWO A;  4PPE A;  1JM7 A;  5B76 A;  2G45 A;  3KNV A;  5TBN A;  2JMD A;  2XEU A;  2VJE B;  4L58 A;  2OXQ C;  4UP0 A;  3U5O A;  3SOU A;  5B79 A;  3ZTG A;  2QIC A;  4S3O B;  5G04 B;  2YQL A;  3HCU A;  1F62 A;  3ASL A;  2G6Q A;  2YW8 A;  2JMJ A;  3HCT A;  3DQV R;  2LQ6 A;  5TAB A;  2LGG A;  2RI7 A;  5DIN A;  4W4U A;  3N9Q A;  2MNZ A;  1HYJ A;  2I50 A;  5G05 B;  1WEP A;  2KYU A;  4LKA A;  2E6R A;  2FUI A;  5DKA A;  1VYX A;  3M62 A;  2IDA A;  2C2L A;  2E6S A;  1WIL A;  2QJ0 A;  4ZQL A;  3M99 A;  5JG6 A;  3L11 A;  2G43 A;  5I3L A;  2MD8 C;  5H1U A;  5LKX A;  4V3L C;  2RSD A;  2EGP A;  2KWN A;  3ZVY A;  4AYC A;  4N3W A;  2EOD A;  2K17 A;  3L1X A;  3QZV A;  4S3O C;  4MSX A;  4GND A;  4R7E A;  2D8S A;  4AUQ B;  1T1H A;  5LKZ A;  1WEQ A;  2CSY A;  1FP0 A;  2KU3 A;  2Y1M A;  2KWJ A;  5FER A;  3PHD A;  2YRE A;  4WZ3 B;  4WA6 A;  2FSA A;  2VPB A;  4GB0 A;  1X4U A;  2KFT A;  2LDR A;  4C9Z A;  2MT5 A;  3U5N A;  4I7B A;  4AYC B;  2MUM A;  2VJF B;  2LXH C;  3ZPV 1;  5G0F A;  4A4B A;  5H1T A;  2KGG A;  4FJC A;  1WEE A;  3ZVZ B;  3O35 A;  2KE1 A;  2LGL A;  4BHW A;  1BOR A;  3C5K A;  2PUY A;  3RPG B;  4LJN A;  4TKP B;  4I7C A;  4QF3 A;  5H1V A;  2CKL A;  1IYM A;  2M6M A;  4Q6F A;  3KV5 A;  5EYA F;  3ZYQ A;  4MVT A;  2LXP C;  4YAT A;  3EB6 A;  4I7D A;  3N9N A;  5J3X A;  2LGV A;  4P5O B;  1WE9 A;  1WEV A;  4YAB A;  3L1Z B;  2K16 A;  2F42 A;  3LQH A;  1ZBD B;  4XI1 A;  2M1R A;  5AIT A;  1VFY A;  3DPL R;  1JM7 B;  2YU4 A;  3M63 A;  3U5P A;  2VNF A;  4FK5 A;  2MA6 A;  4YC9 A;  1FBV A;  4F52 B;  3O70 A;  3SOX A;  1VD4 A;  3T7L A;  1WGM A;  4IC3 A;  4AP4 A;  4GNG A;  4YBS A;  4FIP A;  5C11 A;  5FB1 A;  4LAD B;  2YUC A;  2EA6 A;  4PTB A;  4CCG X;  2LN0 A;  1RMD A;  3MHS A;  4L7X A;  3N9O A;  2MD7 B;  2UZG A;  4WZ2 A;  2L75 A;  3FL2 A;  4QF2 A;  1WEU A;  2PNX A;  3PUR A;  1JOC A;  5C13 A;  2VP7 A;  4V3K C;  4N4F A;  2LGK A;  5TDR A;  4AVX A;  1WES A;  5AIU A;  3PUQ A;  5H9M A;  4B7Y C;  4O64 A;  1MM3 A;  4LLB A;  2YHO A;  2VPG A;  4YAD A;  3GL6 A;  4ZUX U;  1WEW A;  1CHC A;  3O7A A;  4GNE A;  4NN2 A;  1WIM A;  5D1K B;  2L80 A;  2L0B A;  3O33 A;  2MIQ A;  2VJE A;  3LQI A;  5LKT A;  1WEO A;  5D1L B;  2CT2 A;  3KQI A;  3O37 A;  2VJF A;  2YYR A;  1HYI A;  2QIZ A;  4R2Y A;  5B75 A;  5B78 A;  1Z6U A;  2KR4 A;  2KRE A;  3EB5 A;  2KWK A;  4YBT A;  2ZET C;  1LDK C;  2LV9 A;  3I2D A;  3LRQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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