3M63A

Crystal structure of ufd2 in complex with the ubiquitin-like (ubl) domain of dsk2
Total Genus 370
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
370
sequence length
961
structure length
953
Chain Sequence
SPEFRSMTAIEDILQITTDPSDTRGYSLLKSEEVPQGSTLGVDFIDTLLLYQLTENEKLDKPFEYLNDCFRRNQQQKRITKNKPNAESLHSTFQEIDRLVIGYGVVALQIENFCMNGAFINYITGIVSNVNSYTDFLSQIIQRAILEGTALDLLNAVFPTLLEYCNKHVSHFDLNESVIYNNVLTIFELFVTFKPIAEIFTKIDGFFADYSCKPQDFERKTILGPILSLSPIEAAVAIRNYGDNLLRSKQQTAMIHESLQAEHKVVIDRLFFIVDKLVRGSLNSRTDMISYFAHIANKNHLRRADHPPFKELSSNGFMSNITLLLVRFSQPFLDISYKKIDKIDANYFNNPSLFIDLSGETRLNSDFKEADAFYDKNRKTADSKPNFISDCFFLTLTYLHYGLGGTLSFEEKMGSEIKALKEEIEKVKKIAANHDVFARFITAQLSKMEKALKTTESLRFALQGFFAHRSLQLEVFDFICGASTFLIRVVDPEHEFPFKQIKLPLIPDQIVDNADFLRAHAPVPFKYYPEFVVEGPVNYSLYISKYQTSPIFRNPRLGSFVEFTTMVLRCPELVSNPHLKGKLVQLLSVGAMPLTDNSPGFMMDIFEHDELVNKNLLYALLDFYVIVEKTGSQFYDKFNSRYSISIILEELYYKIPSYKNQLIWQSQNNADFFVRFVARMLNDLTFLLDEGLSNLAEVHNIQNELDNRARGAPREEEDKELQTRLASASRQAKSSCGLADKSMKLFEIYSKDIPAAFVTPEIVYRLASMLNYNLESLVGPKCGELKVKDPQSYSFNPKDLLKALTTVYINLSEQSEFISAVAKDERSFNRNLFVRAVDILGRKTGLASPEFIEKLLNFANKAEEQRKADEEEDLEYGDVPDEFLDPLMYTIMKDPVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDVTPNEELRQKILCFKKQKKEEA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title The yeast E4 ubiquitin ligase Ufd2 interacts with the ubiquitin-like domains of Rad23 and Dsk2 via a novel and distinct ubiquitin-like binding domain.
pubmed doi rcsb
source organism Saccharomyces cerevisiae
molecule tags Ligase/protein binding
molecule keywords Ubiquitin conjugation factor E4
total genus 370
structure length 953
sequence length 961
ec nomenclature ec 2.3.2.27: RING-type E3 ubiquitin transferase.
pdb deposition date 2010-03-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF04564 U-box U-box domain
A PF10408 Ufd2P_core Ubiquitin elongating factor core
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.40.10 Alpha Beta 2-Layer Sandwich Herpes Virus-1 Zinc/RING finger domain, C3HC4 (zinc finger) 3m63A02
3N9OA 4QF2A 2YSMA 3N9LA 4BHWA 2VPEA 2YT5A 5H1VA 2ECTA 2FUUA 2RSDA 2HYED 5TDRA 4V3LC 1WEMA 2YQLA 2JMDA 4FIPA 1MM3A 3LRQA 2YHOA 4I7CA 2M3HA 2XEUA 2FSAA 2C2LA 1WFKA 4YATA 2LQ6A 1WENA 2K1JA 2CT2A 3O37A 2LGGA 2YUCA 5KH7A 4A0CD 1WGMA 5FEYA 2CSYA 4C9ZA 2UZGA 2KWNA 3LQIA 4XI1A 2Y43A 2MIQA 5LKTA 3PHDA 1JM7B 3L1XA 2K17A 2H0DA 2G45A 4AUQB 2D8SA 5KH9A 2YYRA 1WEEA 4FJCA 4V3KC 1WEVA 3N9NA 1WEUA 3DQVR 3HCTA 1WEOA 2OXQC 3M62A 2G6QA 3C5KA 4UP0A 2CKLB 1X4IA 2M85A 2ECGA 2H0DB 2LN0A 3O36A 2LGLA 4S3OB 2ECVA 3KV5A 1HYJA 2MD7B 2PUYA 4UP5A 5C13A 4A49A 1WEPA 2ECJA 3LQHA 2KU3A 4A4BA 2LDRA 2E6RA 4GNGA 4GNEA 4FO9A 4I7BA 2MNZA 3PURA 2KYUA 2QJ0A 2EA6A 3EB6A 3T6RA 2KGGA 3MHHA 1WILA 2NAAA 2MNYA 3U5NA 1Z2QA 2M6MA 3C6WA 3N9PA 5J3XA 2VJEB 2LV9A 2QIZA 1F62A 2F6NA 3SHBA 3HCUA 1JOCA 4YC9A 2L75A 2ECWA 5B78A 4QF3A 4ZDTA 4UI9B 2L0BA 4IC2A 2ECNA 2YURA 3U5PA 2YU4A 3ASLA 3KNVA 1MM2A 1WE9A 5EYAF 5FB1A 3SOWA 4TKPB 3M63A 4S3OC 1BORA 1VYXA 2PNXA 3SOUA 3O70A 5DINA 2L80A 2KWKA 3KQIA 4B86C 3HCSA 1K2FA 2L5UA 4YBSA 2CKLA 5TRBA 4LKAA 2F42A 2JRJA 2VP7A 4AYCB 4CCGX 3EB5A 4WZ0A 1FP0A 3ZNIA 5DKAA 3FL2A 2K16A 4F52B 1XWHA 1RMDA 1Z60A 2C2VS 4AYCA 4WZ2A 1LDJB 2KGIA 2YQMA 3ZVYA 2LGKA 3N9QA 1ZBDB 3ZVZB 3U5MA 2YW8A 5AIUA 1LDKC 3O7AA 3LQJA 3ZYQA 5D1MB 2VPBA 4R7EA 4YABA 3ZTGA 3ZPVE 2EODA 4N4FA 2VJFB 5FB0A 1WIMA 2ECIA 3ZPV1 4BBQA 5B76A 1WEWA 4YBTA 5TBNA 5B79A 2LRIC 5B75A 3RPGC 5C11A 4GB0A 5G05B 2I50A 2LGVA 2MA5A 4I7DA 5LKZA 4P5OB 2RI7A 2KWJA 2MD8C 1U6GB 4AP4A 2QICA 3SOXA 2KFTA 3GL6A 3GV4A 2DX8A 4R8PK 3L1ZB 4MSXA 2VPDA 2HDPA 3I2DA 1WEQA 5D1LB 4L7XA 3RTRB 1HYIA 4WZ3B 3PUQA 2KREA 5LKUA 2M1RA 2VNFA 5G0FA 4O64A 1DVPA 3DPLR 4GNDA 4ZQLA 3O35A 5H1UA 4YAXA 4WA6A 2MA6A 5H9MA 4A4CA 2XB1A 5AITA 1X4JA 3L11A 5TDWA 3HTKC 2KWOA 4IC3A 2MUMA 1IYMA 5H1TA 4B7YC 4R2YA 2KIZA 5TABA 5B77A 4ZUXU 5LCWB 3KV6A 5I3LA 2LXHC 3M99A 2IDAA 3V43A 2F6JA 3NG2A 2KR4A 3QZVA 4CA1A 3RPGB 2Y1MA 2JMJA 4LLBA 2AN6A 2BAYA 1Z6UA 2KE1A 1CHCA 5B8DA 4MVTA 2VJEA 1E4UA 3O34A 5G04B 2MT5A 2YSJA 1G25A 5JG6A 4YADA 1X4UA 2Y1NA 4W4UA 4AVXA 2E6SA 5D1KB 2FUIA 1FBVA 2L43A 2VPGA 1VFYA 4LK9A 1VD4A 3T7LA 1JM7A 5LKXA 1T1HA 2YREA 3IHPA 4L58A 4PPEA 3MHSA 1WESA 3U5OA 2EGPA 2VJFA 5FERA 2LXPC 4YBMA 2YHNA 4NN2A 1V87A 3VK6A 2CSZA 4LADB 4GNFA 3N9MA 5KH3A 2G43A 4Q6FA 2ZETC 2K4DA 2JMIA 4N3WA 4PTBA 3O33A 4LJNA 1N87A 4X3GA 4FK5A
chains in the Genus database with same CATH superfamily
3N9OA 2KKXA 4QF2A 2YSMA 2M13A 3N9LA 4BHWA 2XOZA 2VPEA 2YT5A 5H1VA 2ECTA 2FUUA 2RSDA 2HYED 5TDRA 4V3LC 1WEMA 2YQLA 2JMDA 3PLWA 4FIPA 1MM3A 3LRQA 2YHOA 4I7CA 2M3HA 2XEUA 2FSAA 2C2LA 1WFKA 4YATA 2LQ6A 1WENA 2K1JA 2CT2A 3O37A 2LGGA 3M7KA 2YUCA 5KH7A 4A0CD 1WGMA 2OWAA 5FEYA 2CSYA 4OGCA 3LQIA 2KWNA 2UZGA 4C9ZA 4XI1A 2Y43A 2MIQA 3FAOA 2EGMA 3Q1DA 5LKTA 3PHDA 1JM7B 3L1XA 2K17A 2H0DA 2G45A 4AUQB 2D8SA 5KH9A 2YYRA 1WEEA 3FEHA 4FJCA 4V3KC 1WEVA 3N9NA 1WEUA 3DQVR 3HCTA 1WEOA 2OXQC 3M62A 3T9KA 2G6QA 3C5KA 4UP0A 2CKLB 1X4IA 2M85A 2ECGA 2H0DB 2LN0A 3O36A 2LGLA 4S3OB 2ECVA 3KV5A 1HYJA 2MD7B 2PUYA 4UP5A 3O47A 5C13A 4A49A 1WEPA 2ECJA 3LQHA 2CRWA 2KU3A 4A4BA 2IQJA 2LDRA 2E6RA 4GNGA 4GNEA 4FO9A 4I7BA 2MNZA 3PURA 2KYUA 2QJ0A 3LVRE 3LDYA 2EA6A 2XOCA 2XP0A 3EB6A 3T6RA 2KGGA 3MHHA 1WILA 2NAAA 2MNYA 4OGEA 3U5NA 1Z2QA 2M6MA 3C6WA 3N9PA 5J3XA 2VJEB 2LV9A 2QIZA 2EXUA 1F62A 2F6NA 3SHBA 3HCUA 1JOCA 2FFWA 4YC9A 2L75A 2ECWA 5B78A 3DWDA 4QF3A 2B0OE 4ZDTA 4UI9B 4H9DA 2L0BA 4IC2A 2ECNA 3H7HA 2D8UA 2YURA 3U5PA 2YU4A 3ASLA 3KNVA 1MM2A 1WE9A 5EYAF 5FB1A 3SOWA 4TKPB 3M63A 4S3OC 1BORA 1VYXA 2PNXA 3SOUA 3O70A 3JUEA 5DINA 2DSMA 2L80A 2KWKA 2FD4A 3KQIA 2P57A 4B86C 2MKEA 3HCSA 1K2FA 2L5UA 4YBSA 2CKLA 5TRBA 4LKAA 2F42A 2JRJA 2VP7A 4AYCB 4CCGX 3EB5A 4WZ0A 2YVRA 1FP0A 3ZNIA 5SVXA 5DKAA 3FL2A 2K16A 2CONA 3E2DA 4F52B 1XWHA 1RMDA 3KDEC 1Z60A 2C2VS 4AYCA 4WZ2A 1LDJB 2KGIA 2CRRA 2YQMA 3ZVYA 2LGKA 4F1PA 4Z0RA 3DDTA 3N9QA 1ZBDB 2E61A 3ZVZB 3U5MA 2YW8A 3LJUX 5AIUA 1LDKC 5SVIA 3O7AA 3LQJA 3ZYQA 5D1MB 2VPBA 4R7EA 4YABA 5SVYA 4O62A 3ZTGA 3ZPVE 2EODA 4N4FA 2VJFB 5FB0A 1WIMA 2DJAA 2ECIA 5SVIB 3ZPV1 4BBQA 5B76A 1WEWA 4YBTA 5TBNA 5B79A 2LRIC 5B75A 3RPGC 5C11A 4GB0A 5G05B 2I50A 2LGVA 2MA5A 3FJUB 4I7DA 4P5OB 5LKZA 2RI7A 2KWJA 2MD8C 1U6GB 3LVQE 1MBMA 4AP4A 2QICA 3SOXA 2KFTA 3GL6A 3MDBC 3GV4A 2DX8A 4R8PK 3L1ZB 4MSXA 2VPDA 2HDPA 3I2DA 1WEQA 5D1LB 4Z0OA 4L7XA 3RTRB 1HYIA 4WZ3B 3PUQA 2KREA 5LKUA 2M1RA 2VNFA 2KKYA 5G0FA 4O64A 1DVPA 3DPLR 4GNDA 4ZQLA 3O35A 5H1UA 4YAXA 4WA6A 2RR4A 2MA6A 5H9MA 4A4CA 2XB1A 5AITA 1X4JA 3L11A 5TDWA 3FANA 3HTKC 2KWOA 4IC3A 2MUMA 1DCQA 1IYMA 2JUNA 5H1TA 4B7YC 4R2YA 2KIZA 5TABA 5B77A 5K3QA 4ZUXU 5LCWB 3KV6A 5I3LA 2XOYA 2LXHC 3FM8C 3M99A 2IDAA 3V43A 2F6JA 3NG2A 2KR4A 3QZVA 4CA1A 3RPGB 2Y1MA 2JMJA 4LLBA 2AN6A 2BAYA 1Z6UA 2KE1A 1CHCA 5B8DA 4MVTA 2VJEA 1E4UA 3O34A 5G04B 2MT5A 2YSJA 1G25A 5JG6A 4YADA 1X4UA 2Y1NA 4W4UA 2LAUA 3SUBA 4AVXA 2E6SA 5D1KB 2FUIA 1FBVA 2CSVA 2L43A 2VPGA 1VFYA 2L7PA 4LK9A 1VD4A 3T7LA 2JM3A 4QQ4A 1JM7A 5LKXA 1T1HA 2YREA 3IHPA 4L58A 4PPEA 3MHSA 1WESA 3U5OA 2EGPA 2VJFA 5FERA 2LXPC 4YBMA 2YHNA 4NN2A 1V87A 3VK6A 2CSZA 4LADB 4GNFA 3N9MA 5KH3A 2G43A 4Q6FA 2ZETC 2K4DA 2JMIA 4N3WA 4PTBA 3O33A 4LJNA 1N87A 4X3GA 4FK5A
chains in the Genus database with same CATH topology
3N9OA 4QF2A 2YSMA 3N9LA 4BHWA 2VPEA 2YT5A 5H1VA 2ECTA 2FUUA 2RSDA 2HYED 5TDRA 4V3LC 1WEMA 2YQLA 2JMDA 4FIPA 1MM3A 3LRQA 2YHOA 4I7CA 2M3HA 2XEUA 2FSAA 2C2LA 1WFKA 4YATA 2LQ6A 1WENA 2K1JA 2CT2A 3O37A 2LGGA 2YUCA 5KH7A 4A0CD 1WGMA 5FEYA 2CSYA 4C9ZA 2UZGA 2KWNA 3LQIA 4XI1A 2Y43A 2MIQA 5LKTA 3PHDA 1JM7B 3L1XA 2K17A 2H0DA 2G45A 4AUQB 2D8SA 5KH9A 2YYRA 1WEEA 4FJCA 4V3KC 1WEVA 3N9NA 1WEUA 3DQVR 3HCTA 1WEOA 2OXQC 3M62A 2G6QA 3C5KA 4UP0A 2CKLB 1X4IA 2M85A 2ECGA 2H0DB 2LN0A 3O36A 2LGLA 4S3OB 2ECVA 3KV5A 1HYJA 2MD7B 2PUYA 4UP5A 5C13A 4A49A 1WEPA 2ECJA 3LQHA 2KU3A 4A4BA 2LDRA 2E6RA 4GNGA 4GNEA 4FO9A 4I7BA 2MNZA 3PURA 2KYUA 2QJ0A 2EA6A 3EB6A 3T6RA 2KGGA 3MHHA 1WILA 2NAAA 2MNYA 3U5NA 1Z2QA 2M6MA 3C6WA 3N9PA 5J3XA 2VJEB 2LV9A 2QIZA 1F62A 2F6NA 3SHBA 3HCUA 1JOCA 4YC9A 2L75A 2ECWA 5B78A 4QF3A 4ZDTA 4UI9B 2L0BA 4IC2A 2ECNA 2YURA 3U5PA 2YU4A 3ASLA 3KNVA 1MM2A 1WE9A 5EYAF 5FB1A 3SOWA 4TKPB 3M63A 4S3OC 1BORA 1VYXA 2PNXA 3SOUA 3O70A 5DINA 2L80A 2KWKA 3KQIA 4B86C 3HCSA 1K2FA 2L5UA 4YBSA 2CKLA 5TRBA 4LKAA 2F42A 2JRJA 2VP7A 4AYCB 4CCGX 3EB5A 4WZ0A 1FP0A 3ZNIA 5DKAA 3FL2A 2K16A 4F52B 1XWHA 1RMDA 1Z60A 2C2VS 4AYCA 4WZ2A 1LDJB 2KGIA 2YQMA 3ZVYA 2LGKA 3N9QA 1ZBDB 3ZVZB 3U5MA 2YW8A 5AIUA 1LDKC 3O7AA 3LQJA 3ZYQA 5D1MB 2VPBA 4R7EA 4YABA 3ZTGA 3ZPVE 2EODA 4N4FA 2VJFB 5FB0A 1WIMA 2ECIA 3ZPV1 4BBQA 5B76A 1WEWA 4YBTA 5TBNA 5B79A 2LRIC 5B75A 3RPGC 5C11A 4GB0A 5G05B 2I50A 2LGVA 2MA5A 4I7DA 5LKZA 4P5OB 2RI7A 2KWJA 2MD8C 1U6GB 4AP4A 2QICA 3SOXA 2KFTA 3GL6A 3GV4A 2DX8A 4R8PK 3L1ZB 4MSXA 2VPDA 2HDPA 3I2DA 1WEQA 5D1LB 4L7XA 3RTRB 1HYIA 4WZ3B 3PUQA 2KREA 5LKUA 2M1RA 2VNFA 5G0FA 4O64A 1DVPA 3DPLR 4GNDA 4ZQLA 3O35A 5H1UA 4YAXA 4WA6A 2MA6A 5H9MA 4A4CA 2XB1A 5AITA 1X4JA 3L11A 5TDWA 3HTKC 2KWOA 4IC3A 2MUMA 1IYMA 5H1TA 4B7YC 4R2YA 2KIZA 5TABA 5B77A 4ZUXU 5LCWB 3KV6A 5I3LA 2LXHC 3M99A 2IDAA 3V43A 2F6JA 3NG2A 2KR4A 3QZVA 4CA1A 3RPGB 2Y1MA 2JMJA 4LLBA 2AN6A 2BAYA 1Z6UA 2KE1A 1CHCA 5B8DA 4MVTA 2VJEA 1E4UA 3O34A 5G04B 2MT5A 2YSJA 1G25A 5JG6A 4YADA 1X4UA 2Y1NA 4W4UA 4AVXA 2E6SA 5D1KB 2FUIA 1FBVA 2L43A 2VPGA 1VFYA 4LK9A 1VD4A 3T7LA 1JM7A 5LKXA 1T1HA 2YREA 3IHPA 4L58A 4PPEA 3MHSA 1WESA 3U5OA 2EGPA 2VJFA 5FERA 2LXPC 4YBMA 2YHNA 4NN2A 1V87A 3VK6A 2CSZA 4LADB 4GNFA 3N9MA 5KH3A 2G43A 4Q6FA 2ZETC 2K4DA 2JMIA 4N3WA 4PTBA 3O33A 4LJNA 1N87A 4X3GA 4FK5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3N9O A;  4QF2 A;  2YSM A;  3N9L A;  4BHW A;  2VPE A;  2YT5 A;  5H1V A;  2ECT A;  2FUU A;  2RSD A;  2HYE D;  5TDR A;  4V3L C;  1WEM A;  2YQL A;  2JMD A;  4FIP A;  1MM3 A;  3LRQ A;  2YHO A;  4I7C A;  2M3H A;  2XEU A;  2FSA A;  2C2L A;  1WFK A;  4YAT A;  2LQ6 A;  1WEN A;  2K1J A;  2CT2 A;  3O37 A;  2LGG A;  2YUC A;  5KH7 A;  4A0C D;  1WGM A;  5FEY A;  2CSY A;  4C9Z A;  2UZG A;  2KWN A;  3LQI A;  4XI1 A;  2Y43 A;  2MIQ A;  5LKT A;  3PHD A;  1JM7 B;  3L1X A;  2K17 A;  2H0D A;  2G45 A;  4AUQ B;  2D8S A;  5KH9 A;  2YYR A;  1WEE A;  4FJC A;  4V3K C;  1WEV A;  3N9N A;  1WEU A;  3DQV R;  3HCT A;  1WEO A;  2OXQ C;  3M62 A;  2G6Q A;  3C5K A;  4UP0 A;  2CKL B;  1X4I A;  2M85 A;  2ECG A;  2H0D B;  2LN0 A;  3O36 A;  2LGL A;  4S3O B;  2ECV A;  3KV5 A;  1HYJ A;  2MD7 B;  2PUY A;  4UP5 A;  5C13 A;  4A49 A;  1WEP A;  2ECJ A;  3LQH A;  2KU3 A;  4A4B A;  2LDR A;  2E6R A;  4GNG A;  4GNE A;  4FO9 A;  4I7B A;  2MNZ A;  3PUR A;  2KYU A;  2QJ0 A;  2EA6 A;  3EB6 A;  3T6R A;  2KGG A;  3MHH A;  1WIL A;  2NAA A;  2MNY A;  3U5N A;  1Z2Q A;  2M6M A;  3C6W A;  3N9P A;  5J3X A;  2VJE B;  2LV9 A;  2QIZ A;  1F62 A;  2F6N A;  3SHB A;  3HCU A;  1JOC A;  4YC9 A;  2L75 A;  2ECW A;  5B78 A;  4QF3 A;  4ZDT A;  4UI9 B;  2L0B A;  4IC2 A;  2ECN A;  2YUR A;  3U5P A;  2YU4 A;  3ASL A;  3KNV A;  1MM2 A;  1WE9 A;  5EYA F;  5FB1 A;  3SOW A;  4TKP B;  3M63 A;  4S3O C;  1BOR A;  1VYX A;  2PNX A;  3SOU A;  3O70 A;  5DIN A;  2L80 A;  2KWK A;  3KQI A;  4B86 C;  3HCS A;  1K2F A;  2L5U A;  4YBS A;  2CKL A;  5TRB A;  4LKA A;  2F42 A;  2JRJ A;  2VP7 A;  4AYC B;  4CCG X;  3EB5 A;  4WZ0 A;  1FP0 A;  3ZNI A;  5DKA A;  3FL2 A;  2K16 A;  4F52 B;  1XWH A;  1RMD A;  1Z60 A;  2C2V S;  4AYC A;  4WZ2 A;  1LDJ B;  2KGI A;  2YQM A;  3ZVY A;  2LGK A;  3N9Q A;  1ZBD B;  3ZVZ B;  3U5M A;  2YW8 A;  5AIU A;  1LDK C;  3O7A A;  3LQJ A;  3ZYQ A;  5D1M B;  2VPB A;  4R7E A;  4YAB A;  3ZTG A;  3ZPV E;  2EOD A;  4N4F A;  2VJF B;  5FB0 A;  1WIM A;  2ECI A;  3ZPV 1;  4BBQ A;  5B76 A;  1WEW A;  4YBT A;  5TBN A;  5B79 A;  2LRI C;  5B75 A;  3RPG C;  5C11 A;  4GB0 A;  5G05 B;  2I50 A;  2LGV A;  2MA5 A;  4I7D A;  5LKZ A;  4P5O B;  2RI7 A;  2KWJ A;  2MD8 C;  1U6G B;  4AP4 A;  2QIC A;  3SOX A;  2KFT A;  3GL6 A;  3GV4 A;  2DX8 A;  4R8P K;  3L1Z B;  4MSX A;  2VPD A;  2HDP A;  3I2D A;  1WEQ A;  5D1L B;  4L7X A;  3RTR B;  1HYI A;  4WZ3 B;  3PUQ A;  2KRE A;  5LKU A;  2M1R A;  2VNF A;  5G0F A;  4O64 A;  1DVP A;  3DPL R;  4GND A;  4ZQL A;  3O35 A;  5H1U A;  4YAX A;  4WA6 A;  2MA6 A;  5H9M A;  4A4C A;  2XB1 A;  5AIT A;  1X4J A;  3L11 A;  5TDW A;  3HTK C;  2KWO A;  4IC3 A;  2MUM A;  1IYM A;  5H1T A;  4B7Y C;  4R2Y A;  2KIZ A;  5TAB A;  5B77 A;  4ZUX U;  5LCW B;  3KV6 A;  5I3L A;  2LXH C;  3M99 A;  2IDA A;  3V43 A;  2F6J A;  3NG2 A;  2KR4 A;  3QZV A;  4CA1 A;  3RPG B;  2Y1M A;  2JMJ A;  4LLB A;  2AN6 A;  2BAY A;  1Z6U A;  2KE1 A;  1CHC A;  5B8D A;  4MVT A;  2VJE A;  1E4U A;  3O34 A;  5G04 B;  2MT5 A;  2YSJ A;  1G25 A;  5JG6 A;  4YAD A;  1X4U A;  2Y1N A;  4W4U A;  4AVX A;  2E6S A;  5D1K B;  2FUI A;  1FBV A;  2L43 A;  2VPG A;  1VFY A;  4LK9 A;  1VD4 A;  3T7L A;  1JM7 A;  5LKX A;  1T1H A;  2YRE A;  3IHP A;  4L58 A;  4PPE A;  3MHS A;  1WES A;  3U5O A;  2EGP A;  2VJF A;  5FER A;  2LXP C;  4YBM A;  2YHN A;  4NN2 A;  1V87 A;  3VK6 A;  2CSZ A;  4LAD B;  4GNF A;  3N9M A;  5KH3 A;  2G43 A;  4Q6F A;  2ZET C;  2K4D A;  2JMI A;  4N3W A;  4PTB A;  3O33 A;  4LJN A;  1N87 A;  4X3G A;  4FK5 A; 
#chains in the Genus database with same CATH topology
 3N9O A;  2KKX A;  4QF2 A;  2YSM A;  2M13 A;  3N9L A;  4BHW A;  2XOZ A;  2VPE A;  2YT5 A;  5H1V A;  2ECT A;  2FUU A;  2RSD A;  2HYE D;  5TDR A;  4V3L C;  1WEM A;  2YQL A;  2JMD A;  3PLW A;  4FIP A;  1MM3 A;  3LRQ A;  2YHO A;  4I7C A;  2M3H A;  2XEU A;  2FSA A;  2C2L A;  1WFK A;  4YAT A;  2LQ6 A;  1WEN A;  2K1J A;  2CT2 A;  3O37 A;  2LGG A;  3M7K A;  2YUC A;  5KH7 A;  4A0C D;  1WGM A;  2OWA A;  5FEY A;  2CSY A;  4OGC A;  3LQI A;  2KWN A;  2UZG A;  4C9Z A;  4XI1 A;  2Y43 A;  2MIQ A;  3FAO A;  2EGM A;  3Q1D A;  5LKT A;  3PHD A;  1JM7 B;  3L1X A;  2K17 A;  2H0D A;  2G45 A;  4AUQ B;  2D8S A;  5KH9 A;  2YYR A;  1WEE A;  3FEH A;  4FJC A;  4V3K C;  1WEV A;  3N9N A;  1WEU A;  3DQV R;  3HCT A;  1WEO A;  2OXQ C;  3M62 A;  3T9K A;  2G6Q A;  3C5K A;  4UP0 A;  2CKL B;  1X4I A;  2M85 A;  2ECG A;  2H0D B;  2LN0 A;  3O36 A;  2LGL A;  4S3O B;  2ECV A;  3KV5 A;  1HYJ A;  2MD7 B;  2PUY A;  4UP5 A;  3O47 A;  5C13 A;  4A49 A;  1WEP A;  2ECJ A;  3LQH A;  2CRW A;  2KU3 A;  4A4B A;  2IQJ A;  2LDR A;  2E6R A;  4GNG A;  4GNE A;  4FO9 A;  4I7B A;  2MNZ A;  3PUR A;  2KYU A;  2QJ0 A;  3LVR E;  3LDY A;  2EA6 A;  2XOC A;  2XP0 A;  3EB6 A;  3T6R A;  2KGG A;  3MHH A;  1WIL A;  2NAA A;  2MNY A;  4OGE A;  3U5N A;  1Z2Q A;  2M6M A;  3C6W A;  3N9P A;  5J3X A;  2VJE B;  2LV9 A;  2QIZ A;  2EXU A;  1F62 A;  2F6N A;  3SHB A;  3HCU A;  1JOC A;  2FFW A;  4YC9 A;  2L75 A;  2ECW A;  5B78 A;  3DWD A;  4QF3 A;  2B0O E;  4ZDT A;  4UI9 B;  4H9D A;  2L0B A;  4IC2 A;  2ECN A;  3H7H A;  2D8U A;  2YUR A;  3U5P A;  2YU4 A;  3ASL A;  3KNV A;  1MM2 A;  1WE9 A;  5EYA F;  5FB1 A;  3SOW A;  4TKP B;  3M63 A;  4S3O C;  1BOR A;  1VYX A;  2PNX A;  3SOU A;  3O70 A;  3JUE A;  5DIN A;  2DSM A;  2L80 A;  2KWK A;  2FD4 A;  3KQI A;  2P57 A;  4B86 C;  2MKE A;  3HCS A;  1K2F A;  2L5U A;  4YBS A;  2CKL A;  5TRB A;  4LKA A;  2F42 A;  2JRJ A;  2VP7 A;  4AYC B;  4CCG X;  3EB5 A;  4WZ0 A;  2YVR A;  1FP0 A;  3ZNI A;  5SVX A;  5DKA A;  3FL2 A;  2K16 A;  2CON A;  3E2D A;  4F52 B;  1XWH A;  1RMD A;  3KDE C;  1Z60 A;  2C2V S;  4AYC A;  4WZ2 A;  1LDJ B;  2KGI A;  2CRR A;  2YQM A;  3ZVY A;  2LGK A;  4F1P A;  4Z0R A;  3DDT A;  3N9Q A;  1ZBD B;  2E61 A;  3ZVZ B;  3U5M A;  2YW8 A;  3LJU X;  5AIU A;  1LDK C;  5SVI A;  3O7A A;  3LQJ A;  3ZYQ A;  5D1M B;  2VPB A;  4R7E A;  4YAB A;  5SVY A;  4O62 A;  3ZTG A;  3ZPV E;  2EOD A;  4N4F A;  2VJF B;  5FB0 A;  1WIM A;  2DJA A;  2ECI A;  5SVI B;  3ZPV 1;  4BBQ A;  5B76 A;  1WEW A;  4YBT A;  5TBN A;  5B79 A;  2LRI C;  5B75 A;  3RPG C;  5C11 A;  4GB0 A;  5G05 B;  2I50 A;  2LGV A;  2MA5 A;  3FJU B;  4I7D A;  4P5O B;  5LKZ A;  2RI7 A;  2KWJ A;  2MD8 C;  1U6G B;  3LVQ E;  1MBM A;  4AP4 A;  2QIC A;  3SOX A;  2KFT A;  3GL6 A;  3MDB C;  3GV4 A;  2DX8 A;  4R8P K;  3L1Z B;  4MSX A;  2VPD A;  2HDP A;  3I2D A;  1WEQ A;  5D1L B;  4Z0O A;  4L7X A;  3RTR B;  1HYI A;  4WZ3 B;  3PUQ A;  2KRE A;  5LKU A;  2M1R A;  2VNF A;  2KKY A;  5G0F A;  4O64 A;  1DVP A;  3DPL R;  4GND A;  4ZQL A;  3O35 A;  5H1U A;  4YAX A;  4WA6 A;  2RR4 A;  2MA6 A;  5H9M A;  4A4C A;  2XB1 A;  5AIT A;  1X4J A;  3L11 A;  5TDW A;  3FAN A;  3HTK C;  2KWO A;  4IC3 A;  2MUM A;  1DCQ A;  1IYM A;  2JUN A;  5H1T A;  4B7Y C;  4R2Y A;  2KIZ A;  5TAB A;  5B77 A;  5K3Q A;  4ZUX U;  5LCW B;  3KV6 A;  5I3L A;  2XOY A;  2LXH C;  3FM8 C;  3M99 A;  2IDA A;  3V43 A;  2F6J A;  3NG2 A;  2KR4 A;  3QZV A;  4CA1 A;  3RPG B;  2Y1M A;  2JMJ A;  4LLB A;  2AN6 A;  2BAY A;  1Z6U A;  2KE1 A;  1CHC A;  5B8D A;  4MVT A;  2VJE A;  1E4U A;  3O34 A;  5G04 B;  2MT5 A;  2YSJ A;  1G25 A;  5JG6 A;  4YAD A;  1X4U A;  2Y1N A;  4W4U A;  2LAU A;  3SUB A;  4AVX A;  2E6S A;  5D1K B;  2FUI A;  1FBV A;  2CSV A;  2L43 A;  2VPG A;  1VFY A;  2L7P A;  4LK9 A;  1VD4 A;  3T7L A;  2JM3 A;  4QQ4 A;  1JM7 A;  5LKX A;  1T1H A;  2YRE A;  3IHP A;  4L58 A;  4PPE A;  3MHS A;  1WES A;  3U5O A;  2EGP A;  2VJF A;  5FER A;  2LXP C;  4YBM A;  2YHN A;  4NN2 A;  1V87 A;  3VK6 A;  2CSZ A;  4LAD B;  4GNF A;  3N9M A;  5KH3 A;  2G43 A;  4Q6F A;  2ZET C;  2K4D A;  2JMI A;  4N3W A;  4PTB A;  3O33 A;  4LJN A;  1N87 A;  4X3G A;  4FK5 A; 
#chains in the Genus database with same CATH homology
 3N9O A;  4QF2 A;  2YSM A;  3N9L A;  4BHW A;  2VPE A;  2YT5 A;  5H1V A;  2ECT A;  2FUU A;  2RSD A;  2HYE D;  5TDR A;  4V3L C;  1WEM A;  2YQL A;  2JMD A;  4FIP A;  1MM3 A;  3LRQ A;  2YHO A;  4I7C A;  2M3H A;  2XEU A;  2FSA A;  2C2L A;  1WFK A;  4YAT A;  2LQ6 A;  1WEN A;  2K1J A;  2CT2 A;  3O37 A;  2LGG A;  2YUC A;  5KH7 A;  4A0C D;  1WGM A;  5FEY A;  2CSY A;  4C9Z A;  2UZG A;  2KWN A;  3LQI A;  4XI1 A;  2Y43 A;  2MIQ A;  5LKT A;  3PHD A;  1JM7 B;  3L1X A;  2K17 A;  2H0D A;  2G45 A;  4AUQ B;  2D8S A;  5KH9 A;  2YYR A;  1WEE A;  4FJC A;  4V3K C;  1WEV A;  3N9N A;  1WEU A;  3DQV R;  3HCT A;  1WEO A;  2OXQ C;  3M62 A;  2G6Q A;  3C5K A;  4UP0 A;  2CKL B;  1X4I A;  2M85 A;  2ECG A;  2H0D B;  2LN0 A;  3O36 A;  2LGL A;  4S3O B;  2ECV A;  3KV5 A;  1HYJ A;  2MD7 B;  2PUY A;  4UP5 A;  5C13 A;  4A49 A;  1WEP A;  2ECJ A;  3LQH A;  2KU3 A;  4A4B A;  2LDR A;  2E6R A;  4GNG A;  4GNE A;  4FO9 A;  4I7B A;  2MNZ A;  3PUR A;  2KYU A;  2QJ0 A;  2EA6 A;  3EB6 A;  3T6R A;  2KGG A;  3MHH A;  1WIL A;  2NAA A;  2MNY A;  3U5N A;  1Z2Q A;  2M6M A;  3C6W A;  3N9P A;  5J3X A;  2VJE B;  2LV9 A;  2QIZ A;  1F62 A;  2F6N A;  3SHB A;  3HCU A;  1JOC A;  4YC9 A;  2L75 A;  2ECW A;  5B78 A;  4QF3 A;  4ZDT A;  4UI9 B;  2L0B A;  4IC2 A;  2ECN A;  2YUR A;  3U5P A;  2YU4 A;  3ASL A;  3KNV A;  1MM2 A;  1WE9 A;  5EYA F;  5FB1 A;  3SOW A;  4TKP B;  3M63 A;  4S3O C;  1BOR A;  1VYX A;  2PNX A;  3SOU A;  3O70 A;  5DIN A;  2L80 A;  2KWK A;  3KQI A;  4B86 C;  3HCS A;  1K2F A;  2L5U A;  4YBS A;  2CKL A;  5TRB A;  4LKA A;  2F42 A;  2JRJ A;  2VP7 A;  4AYC B;  4CCG X;  3EB5 A;  4WZ0 A;  1FP0 A;  3ZNI A;  5DKA A;  3FL2 A;  2K16 A;  4F52 B;  1XWH A;  1RMD A;  1Z60 A;  2C2V S;  4AYC A;  4WZ2 A;  1LDJ B;  2KGI A;  2YQM A;  3ZVY A;  2LGK A;  3N9Q A;  1ZBD B;  3ZVZ B;  3U5M A;  2YW8 A;  5AIU A;  1LDK C;  3O7A A;  3LQJ A;  3ZYQ A;  5D1M B;  2VPB A;  4R7E A;  4YAB A;  3ZTG A;  3ZPV E;  2EOD A;  4N4F A;  2VJF B;  5FB0 A;  1WIM A;  2ECI A;  3ZPV 1;  4BBQ A;  5B76 A;  1WEW A;  4YBT A;  5TBN A;  5B79 A;  2LRI C;  5B75 A;  3RPG C;  5C11 A;  4GB0 A;  5G05 B;  2I50 A;  2LGV A;  2MA5 A;  4I7D A;  5LKZ A;  4P5O B;  2RI7 A;  2KWJ A;  2MD8 C;  1U6G B;  4AP4 A;  2QIC A;  3SOX A;  2KFT A;  3GL6 A;  3GV4 A;  2DX8 A;  4R8P K;  3L1Z B;  4MSX A;  2VPD A;  2HDP A;  3I2D A;  1WEQ A;  5D1L B;  4L7X A;  3RTR B;  1HYI A;  4WZ3 B;  3PUQ A;  2KRE A;  5LKU A;  2M1R A;  2VNF A;  5G0F A;  4O64 A;  1DVP A;  3DPL R;  4GND A;  4ZQL A;  3O35 A;  5H1U A;  4YAX A;  4WA6 A;  2MA6 A;  5H9M A;  4A4C A;  2XB1 A;  5AIT A;  1X4J A;  3L11 A;  5TDW A;  3HTK C;  2KWO A;  4IC3 A;  2MUM A;  1IYM A;  5H1T A;  4B7Y C;  4R2Y A;  2KIZ A;  5TAB A;  5B77 A;  4ZUX U;  5LCW B;  3KV6 A;  5I3L A;  2LXH C;  3M99 A;  2IDA A;  3V43 A;  2F6J A;  3NG2 A;  2KR4 A;  3QZV A;  4CA1 A;  3RPG B;  2Y1M A;  2JMJ A;  4LLB A;  2AN6 A;  2BAY A;  1Z6U A;  2KE1 A;  1CHC A;  5B8D A;  4MVT A;  2VJE A;  1E4U A;  3O34 A;  5G04 B;  2MT5 A;  2YSJ A;  1G25 A;  5JG6 A;  4YAD A;  1X4U A;  2Y1N A;  4W4U A;  4AVX A;  2E6S A;  5D1K B;  2FUI A;  1FBV A;  2L43 A;  2VPG A;  1VFY A;  4LK9 A;  1VD4 A;  3T7L A;  1JM7 A;  5LKX A;  1T1H A;  2YRE A;  3IHP A;  4L58 A;  4PPE A;  3MHS A;  1WES A;  3U5O A;  2EGP A;  2VJF A;  5FER A;  2LXP C;  4YBM A;  2YHN A;  4NN2 A;  1V87 A;  3VK6 A;  2CSZ A;  4LAD B;  4GNF A;  3N9M A;  5KH3 A;  2G43 A;  4Q6F A;  2ZET C;  2K4D A;  2JMI A;  4N3W A;  4PTB A;  3O33 A;  4LJN A;  1N87 A;  4X3G A;  4FK5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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