4AYCB

Rnf8 ring domain structure
Total Genus 42
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
127
structure length
126
Chain Sequence
KDFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDIKSKTYSLVLDNINKMVNNLSSEVKERRIVLIRERKAKRLF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Rnf168 Ubiquitinates K13-15 on H2A/H2Ax to Drive DNA Damage Signaling
pubmed doi rcsb
molecule tags Ligase
source organism Homo sapiens
molecule keywords E3 UBIQUITIN-PROTEIN LIGASE RNF8
total genus 42
structure length 126
sequence length 127
ec nomenclature ec 2.3.2.27: RING-type E3 ubiquitin transferase.
pdb deposition date 2012-06-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF13920 zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.40.10 Alpha Beta 2-Layer Sandwich Herpes Virus-1 Zinc/RING finger domain, C3HC4 (zinc finger) 4aycB02
3O35A 1VFYA 2K17A 4XI1A 2K16A 3LQIA 3DPLR 4L7XA 4A0CD 3O7AA 2LGLA 2VPDA 2D8SA 5G05B 5AITA 3GL6A 5H1UA 2KWKA 5TBNA 1WEOA 1JM7A 2ECNA 3L11A 2YQMA 5H1VA 2LGGA 2YU4A 5FB1A 5B75A 2MUMA 2G6QA 4C9ZA 4O64A 2VP7A 2IDAA 5I3LA 5H9MA 5DKAA 3N9LA 2MNYA 4N3WA 1K2FA 4AYCA 4R8PK 4WA6A 4QF3A 2F6JA 1WILA 1Z2QA 3KQIA 2KE1A 3HCUA 4WZ0A 3VK6A 2KWNA 1VD4A 2M1RA 1WIMA 2YQLA 3ZPV1 5JG6A 1WEUA 4YBTA 4F52B 2FSAA 4AVXA 5FEYA 5KH9A 3N9PA 1JOCA 2H0DB 2DX8A 2PUYA 2F42A 3U5PA 2YHOA 4W4UA 2KR4A 3V43A 4V3KC 1WENA 4ZDTA 5C13A 3O36A 3HCTA 1F62A 2VPEA 2HYED 3ZYQA 5B8DA 3MHHA 1LDKC 5TDWA 2Y43A 4L58A 4BBQA 2VJEB 2VJFB 2LRIC 3O37A 3QZVA 2M3HA 4CA1A 2L43A 2LN0A 4WZ3B 4FO9A 2ECGA 3U5MA 3ASLA 1ZBDB 3U5OA 4I7DA 2FUUA 2CKLB 3SOWA 2EGPA 5C11A 5B76A 4B7YC 3ZVZB 5G0FA 4LJNA 2JRJA 2UZGA 4UP5A 3O33A 4NN2A 1MM2A 5KH3A 5FERA 2JMDA 1CHCA 4A49A 3NG2A 2K4DA 4PPEA 2LGKA 2Y1MA 4GNDA 4AP4A 3N9QA 5LKTA 1DVPA 2QJ0A 4X3GA 3HTKC 5LKZA 2XB1A 1FBVA 4YABA 2E6RA 4MVTA 1X4IA 3RPGB 1WFKA 2Y1NA 4B86C 3SHBA 2MD7B 2L80A 3L1XA 2H0DA 4LLBA 3M99A 2NAAA 2VPGA 4Q6FA 3KV5A 2VNFA 5TABA 3EB5A 3T7LA 1FP0A 1V87A 2LV9A 2XEUA 2LXPC 4GNGA 2KFTA 3N9OA 4ZQLA 4YBSA 2RI7A 2LQ6A 1X4UA 2OXQC 3IHPA 5D1KB 2VJEA 4R7EA 3N9MA 2MNZA 2MT5A 3C5KA 3ZNIA 1WE9A 2KGGA 1BORA 2CSZA 2QIZA 3RPGC 1G25A 4YATA 2E6SA 4GB0A 2LXHC 3ZPVE 3PURA 4YAXA 4AUQB 5LKXA 3LQJA 3M63A 2K1JA 2KU3A 3FL2A 3DQVR 2M85A 2L5UA 2PNXA 5AIUA 1LDJB 4PTBA 2JMIA 2KWJA 2CSYA 2YSMA 2YSJA 5H1TA 2KGIA 1RMDA 2JMJA 2M6MA 5G04B 4I7CA 2MD8C 2ECTA 5TRBA 2I50A 5LCWB 1T1HA 2QICA 1WEQA 1WEPA 1Z6UA 4P5OB 1VYXA 4YC9A 5J3XA 1XWHA 4UP0A 4R2YA 2YW8A 2VPBA 2YREA 3T6RA 1WESA 2ECIA 2YYRA 3LRQA 2YT5A 2ECJA 2EODA 5TDRA 4WZ2A 2KYUA 3PUQA 1WEVA 2C2VS 2YHNA 3L1ZB 2LGVA 2FUIA 2CT2A 2ZETC 2MA5A 4N4FA 4YADA 2EA6A 3KV6A 1Z60A 3RTRB 3SOUA 3KNVA 2HDPA 3O70A 2AN6A 5B79A 2ECVA 4I7BA 4IC3A 3GV4A 4LKAA 1WEMA 3ZTGA 3ZVYA 2YURA 4A4BA 3M62A 2KREA 2LDRA 5DINA 5D1MB 1E4UA 1HYJA 1JM7B 4FIPA 4LK9A 2L0BA 3U5NA 3HCSA 2VJFA 2G45A 2KWOA 5B77A 4FJCA 5LKUA 3C6WA 4FK5A 1IYMA 4BHWA 4S3OB 5EYAF 4AYCB 3O34A 4IC2A 3I2DA 5D1LB 2KIZA 4QF2A 2CKLA 2RSDA 1N87A 3PHDA 4A4CA 3N9NA 1X4JA 5FB0A 1WEEA 2ECWA 2F6NA 4UI9B 4LADB 4ZUXU 5B78A 3SOXA 2MA6A 4CCGX 4GNFA 1MM3A 2G43A 1HYIA 4GNEA 2BAYA 5KH7A 2MIQA 4YBMA 4MSXA 4S3OC 2L75A 3MHSA 1U6GB 1WEWA 2C2LA 3EB6A 3LQHA 1WGMA 4V3LC 2YUCA 4TKPB
chains in the Genus database with same CATH superfamily
3O35A 1VFYA 2K17A 4XI1A 2K16A 3LQIA 3DPLR 4L7XA 4A0CD 4QQ4A 3O7AA 2LGLA 4OGCA 2MKEA 2VPDA 2D8SA 5G05B 5AITA 3GL6A 5H1UA 2KWKA 5TBNA 1WEOA 2CONA 1JM7A 2ECNA 3L11A 2LAUA 2YQMA 5H1VA 2LGGA 2YU4A 5FB1A 5B75A 2MUMA 2G6QA 4C9ZA 4O64A 2VP7A 2IDAA 3FAOA 5I3LA 5H9MA 5DKAA 3N9LA 2MNYA 4N3WA 1K2FA 4AYCA 4R8PK 4WA6A 4QF3A 2F6JA 1WILA 1Z2QA 3KQIA 2KKYA 2KE1A 3HCUA 4WZ0A 1MBMA 3VK6A 2KWNA 1VD4A 3SUBA 2M1RA 1WIMA 2YQLA 3ZPV1 5JG6A 1WEUA 4YBTA 4F52B 2FSAA 4AVXA 5FEYA 2JM3A 5KH9A 3N9PA 1JOCA 2H0DB 2DX8A 2PUYA 2F42A 3U5PA 2YHOA 4W4UA 2KR4A 3V43A 4V3KC 1WENA 4ZDTA 5C13A 3O36A 3HCTA 1F62A 2VPEA 2HYED 3DDTA 3ZYQA 5B8DA 3MHHA 1LDKC 2FD4A 3FANA 5TDWA 2XP0A 3KDEC 2Y43A 4L58A 4BBQA 2VJEB 2VJFB 2LRIC 3O37A 3QZVA 2M3HA 4CA1A 2L43A 2LN0A 4WZ3B 4FO9A 2ECGA 3U5MA 2DJAA 3ASLA 3M7KA 1ZBDB 2M13A 3U5OA 4I7DA 2FUUA 2CKLB 3SOWA 2EGPA 3FM8C 5C11A 4H9DA 5B76A 4B7YC 2D8UA 3ZVZB 5G0FA 4LJNA 2JRJA 2UZGA 4UP5A 3O33A 4NN2A 1MM2A 5KH3A 5FERA 2JMDA 1CHCA 4A49A 3NG2A 2K4DA 4PPEA 2LGKA 2Y1MA 4GNDA 4AP4A 3N9QA 5LKTA 1DVPA 2QJ0A 4X3GA 3HTKC 5LKZA 1DCQA 2XB1A 1FBVA 2RR4A 4YABA 2E6RA 5K3QA 2DSMA 2KKXA 4MVTA 2IQJA 1X4IA 3RPGB 2XOYA 1WFKA 2Y1NA 2P57A 4B86C 3SHBA 2MD7B 2L80A 3L1XA 3DWDA 2H0DA 4LLBA 2FFWA 3M99A 2NAAA 2VPGA 2E61A 4Q6FA 2XOCA 3KV5A 2VNFA 5TABA 5SVIA 3EB5A 3T7LA 1FP0A 1V87A 2LV9A 2XEUA 2LXPC 4GNGA 2KFTA 3N9OA 4ZQLA 4YBSA 2RI7A 2LQ6A 1X4UA 2OXQC 3IHPA 5D1KB 2VJEA 3FEHA 4R7EA 3N9MA 4OGEA 2MNZA 2MT5A 3C5KA 3ZNIA 1WE9A 3Q1DA 2KGGA 1BORA 2CSZA 2QIZA 2CRRA 3RPGC 1G25A 4YATA 2E6SA 4GB0A 2LXHC 3ZPVE 3PURA 4YAXA 4AUQB 5LKXA 3LQJA 3M63A 2K1JA 2KU3A 3FL2A 3DQVR 2M85A 2L5UA 2PNXA 5AIUA 1LDJB 4PTBA 2JMIA 3PLWA 2KWJA 2CSYA 2YSMA 2YSJA 5H1TA 2KGIA 1RMDA 2OWAA 2CRWA 2JMJA 2M6MA 5G04B 4I7CA 2MD8C 2ECTA 5TRBA 3FJUB 2I50A 5LCWB 1T1HA 2QICA 1WEQA 1WEPA 1Z6UA 4P5OB 1VYXA 4YC9A 5J3XA 2JUNA 1XWHA 2EGMA 4UP0A 4R2YA 2YW8A 2VPBA 2YREA 3T6RA 1WESA 3JUEA 2ECIA 2YYRA 3LRQA 2YT5A 2ECJA 2EODA 5TDRA 4WZ2A 2KYUA 3PUQA 1WEVA 2C2VS 5SVXA 2YHNA 3L1ZB 2LGVA 2FUIA 2CT2A 2ZETC 2MA5A 4N4FA 4YADA 2EA6A 3KV6A 1Z60A 3RTRB 3SOUA 3KNVA 2L7PA 2HDPA 3O70A 2AN6A 5B79A 2CSVA 2ECVA 2YVRA 4I7BA 4IC3A 3GV4A 4LKAA 1WEMA 3ZTGA 3ZVYA 2YURA 4A4BA 3M62A 2KREA 2LDRA 5DINA 5D1MB 1E4UA 3LDYA 1HYJA 1JM7B 4FIPA 4O62A 2B0OE 4LK9A 2L0BA 3U5NA 3HCSA 2VJFA 2G45A 4Z0OA 2EXUA 2KWOA 5B77A 4FJCA 5LKUA 3C6WA 4FK5A 1IYMA 4BHWA 4S3OB 5EYAF 4AYCB 3O34A 4IC2A 3I2DA 5D1LB 3LJUX 2KIZA 3O47A 4QF2A 2CKLA 2RSDA 1N87A 3PHDA 4A4CA 3N9NA 1X4JA 5FB0A 1WEEA 2ECWA 2F6NA 4UI9B 4LADB 4ZUXU 5SVIB 4Z0RA 5B78A 3SOXA 3LVQE 2MA6A 4CCGX 4GNFA 1MM3A 3E2DA 2G43A 1HYIA 4GNEA 2BAYA 5KH7A 5SVYA 2MIQA 4YBMA 4MSXA 3T9KA 3LVRE 4S3OC 4F1PA 2L75A 3MHSA 3MDBC 1U6GB 1WEWA 2C2LA 3EB6A 3LQHA 1WGMA 3H7HA 4V3LC 2YUCA 2XOZA 4TKPB
chains in the Genus database with same CATH topology
3O35A 1VFYA 2K17A 4XI1A 2K16A 3LQIA 3DPLR 4L7XA 4A0CD 3O7AA 2LGLA 2VPDA 2D8SA 5G05B 5AITA 3GL6A 5H1UA 2KWKA 5TBNA 1WEOA 1JM7A 2ECNA 3L11A 2YQMA 5H1VA 2LGGA 2YU4A 5FB1A 5B75A 2MUMA 2G6QA 4C9ZA 4O64A 2VP7A 2IDAA 5I3LA 5H9MA 5DKAA 3N9LA 2MNYA 4N3WA 1K2FA 4AYCA 4R8PK 4WA6A 4QF3A 2F6JA 1WILA 1Z2QA 3KQIA 2KE1A 3HCUA 4WZ0A 3VK6A 2KWNA 1VD4A 2M1RA 1WIMA 2YQLA 3ZPV1 5JG6A 1WEUA 4YBTA 4F52B 2FSAA 4AVXA 5FEYA 5KH9A 3N9PA 1JOCA 2H0DB 2DX8A 2PUYA 2F42A 3U5PA 2YHOA 4W4UA 2KR4A 3V43A 4V3KC 1WENA 4ZDTA 5C13A 3O36A 3HCTA 1F62A 2VPEA 2HYED 3ZYQA 5B8DA 3MHHA 1LDKC 5TDWA 2Y43A 4L58A 4BBQA 2VJEB 2VJFB 2LRIC 3O37A 3QZVA 2M3HA 4CA1A 2L43A 2LN0A 4WZ3B 4FO9A 2ECGA 3U5MA 3ASLA 1ZBDB 3U5OA 4I7DA 2FUUA 2CKLB 3SOWA 2EGPA 5C11A 5B76A 4B7YC 3ZVZB 5G0FA 4LJNA 2JRJA 2UZGA 4UP5A 3O33A 4NN2A 1MM2A 5KH3A 5FERA 2JMDA 1CHCA 4A49A 3NG2A 2K4DA 4PPEA 2LGKA 2Y1MA 4GNDA 4AP4A 3N9QA 5LKTA 1DVPA 2QJ0A 4X3GA 3HTKC 5LKZA 2XB1A 1FBVA 4YABA 2E6RA 4MVTA 1X4IA 3RPGB 1WFKA 2Y1NA 4B86C 3SHBA 2MD7B 2L80A 3L1XA 2H0DA 4LLBA 3M99A 2NAAA 2VPGA 4Q6FA 3KV5A 2VNFA 5TABA 3EB5A 3T7LA 1FP0A 1V87A 2LV9A 2XEUA 2LXPC 4GNGA 2KFTA 3N9OA 4ZQLA 4YBSA 2RI7A 2LQ6A 1X4UA 2OXQC 3IHPA 5D1KB 2VJEA 4R7EA 3N9MA 2MNZA 2MT5A 3C5KA 3ZNIA 1WE9A 2KGGA 1BORA 2CSZA 2QIZA 3RPGC 1G25A 4YATA 2E6SA 4GB0A 2LXHC 3ZPVE 3PURA 4YAXA 4AUQB 5LKXA 3LQJA 3M63A 2K1JA 2KU3A 3FL2A 3DQVR 2M85A 2L5UA 2PNXA 5AIUA 1LDJB 4PTBA 2JMIA 2KWJA 2CSYA 2YSMA 2YSJA 5H1TA 2KGIA 1RMDA 2JMJA 2M6MA 5G04B 4I7CA 2MD8C 2ECTA 5TRBA 2I50A 5LCWB 1T1HA 2QICA 1WEQA 1WEPA 1Z6UA 4P5OB 1VYXA 4YC9A 5J3XA 1XWHA 4UP0A 4R2YA 2YW8A 2VPBA 2YREA 3T6RA 1WESA 2ECIA 2YYRA 3LRQA 2YT5A 2ECJA 2EODA 5TDRA 4WZ2A 2KYUA 3PUQA 1WEVA 2C2VS 2YHNA 3L1ZB 2LGVA 2FUIA 2CT2A 2ZETC 2MA5A 4N4FA 4YADA 2EA6A 3KV6A 1Z60A 3RTRB 3SOUA 3KNVA 2HDPA 3O70A 2AN6A 5B79A 2ECVA 4I7BA 4IC3A 3GV4A 4LKAA 1WEMA 3ZTGA 3ZVYA 2YURA 4A4BA 3M62A 2KREA 2LDRA 5DINA 5D1MB 1E4UA 1HYJA 1JM7B 4FIPA 4LK9A 2L0BA 3U5NA 3HCSA 2VJFA 2G45A 2KWOA 5B77A 4FJCA 5LKUA 3C6WA 4FK5A 1IYMA 4BHWA 4S3OB 5EYAF 4AYCB 3O34A 4IC2A 3I2DA 5D1LB 2KIZA 4QF2A 2CKLA 2RSDA 1N87A 3PHDA 4A4CA 3N9NA 1X4JA 5FB0A 1WEEA 2ECWA 2F6NA 4UI9B 4LADB 4ZUXU 5B78A 3SOXA 2MA6A 4CCGX 4GNFA 1MM3A 2G43A 1HYIA 4GNEA 2BAYA 5KH7A 2MIQA 4YBMA 4MSXA 4S3OC 2L75A 3MHSA 1U6GB 1WEWA 2C2LA 3EB6A 3LQHA 1WGMA 4V3LC 2YUCA 4TKPB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3O35 A;  1VFY A;  2K17 A;  4XI1 A;  2K16 A;  3LQI A;  3DPL R;  4L7X A;  4A0C D;  3O7A A;  2LGL A;  2VPD A;  2D8S A;  5G05 B;  5AIT A;  3GL6 A;  5H1U A;  2KWK A;  5TBN A;  1WEO A;  1JM7 A;  2ECN A;  3L11 A;  2YQM A;  5H1V A;  2LGG A;  2YU4 A;  5FB1 A;  5B75 A;  2MUM A;  2G6Q A;  4C9Z A;  4O64 A;  2VP7 A;  2IDA A;  5I3L A;  5H9M A;  5DKA A;  3N9L A;  2MNY A;  4N3W A;  1K2F A;  4AYC A;  4R8P K;  4WA6 A;  4QF3 A;  2F6J A;  1WIL A;  1Z2Q A;  3KQI A;  2KE1 A;  3HCU A;  4WZ0 A;  3VK6 A;  2KWN A;  1VD4 A;  2M1R A;  1WIM A;  2YQL A;  3ZPV 1;  5JG6 A;  1WEU A;  4YBT A;  4F52 B;  2FSA A;  4AVX A;  5FEY A;  5KH9 A;  3N9P A;  1JOC A;  2H0D B;  2DX8 A;  2PUY A;  2F42 A;  3U5P A;  2YHO A;  4W4U A;  2KR4 A;  3V43 A;  4V3K C;  1WEN A;  4ZDT A;  5C13 A;  3O36 A;  3HCT A;  1F62 A;  2VPE A;  2HYE D;  3ZYQ A;  5B8D A;  3MHH A;  1LDK C;  5TDW A;  2Y43 A;  4L58 A;  4BBQ A;  2VJE B;  2VJF B;  2LRI C;  3O37 A;  3QZV A;  2M3H A;  4CA1 A;  2L43 A;  2LN0 A;  4WZ3 B;  4FO9 A;  2ECG A;  3U5M A;  3ASL A;  1ZBD B;  3U5O A;  4I7D A;  2FUU A;  2CKL B;  3SOW A;  2EGP A;  5C11 A;  5B76 A;  4B7Y C;  3ZVZ B;  5G0F A;  4LJN A;  2JRJ A;  2UZG A;  4UP5 A;  3O33 A;  4NN2 A;  1MM2 A;  5KH3 A;  5FER A;  2JMD A;  1CHC A;  4A49 A;  3NG2 A;  2K4D A;  4PPE A;  2LGK A;  2Y1M A;  4GND A;  4AP4 A;  3N9Q A;  5LKT A;  1DVP A;  2QJ0 A;  4X3G A;  3HTK C;  5LKZ A;  2XB1 A;  1FBV A;  4YAB A;  2E6R A;  4MVT A;  1X4I A;  3RPG B;  1WFK A;  2Y1N A;  4B86 C;  3SHB A;  2MD7 B;  2L80 A;  3L1X A;  2H0D A;  4LLB A;  3M99 A;  2NAA A;  2VPG A;  4Q6F A;  3KV5 A;  2VNF A;  5TAB A;  3EB5 A;  3T7L A;  1FP0 A;  1V87 A;  2LV9 A;  2XEU A;  2LXP C;  4GNG A;  2KFT A;  3N9O A;  4ZQL A;  4YBS A;  2RI7 A;  2LQ6 A;  1X4U A;  2OXQ C;  3IHP A;  5D1K B;  2VJE A;  4R7E A;  3N9M A;  2MNZ A;  2MT5 A;  3C5K A;  3ZNI A;  1WE9 A;  2KGG A;  1BOR A;  2CSZ A;  2QIZ A;  3RPG C;  1G25 A;  4YAT A;  2E6S A;  4GB0 A;  2LXH C;  3ZPV E;  3PUR A;  4YAX A;  4AUQ B;  5LKX A;  3LQJ A;  3M63 A;  2K1J A;  2KU3 A;  3FL2 A;  3DQV R;  2M85 A;  2L5U A;  2PNX A;  5AIU A;  1LDJ B;  4PTB A;  2JMI A;  2KWJ A;  2CSY A;  2YSM A;  2YSJ A;  5H1T A;  2KGI A;  1RMD A;  2JMJ A;  2M6M A;  5G04 B;  4I7C A;  2MD8 C;  2ECT A;  5TRB A;  2I50 A;  5LCW B;  1T1H A;  2QIC A;  1WEQ A;  1WEP A;  1Z6U A;  4P5O B;  1VYX A;  4YC9 A;  5J3X A;  1XWH A;  4UP0 A;  4R2Y A;  2YW8 A;  2VPB A;  2YRE A;  3T6R A;  1WES A;  2ECI A;  2YYR A;  3LRQ A;  2YT5 A;  2ECJ A;  2EOD A;  5TDR A;  4WZ2 A;  2KYU A;  3PUQ A;  1WEV A;  2C2V S;  2YHN A;  3L1Z B;  2LGV A;  2FUI A;  2CT2 A;  2ZET C;  2MA5 A;  4N4F A;  4YAD A;  2EA6 A;  3KV6 A;  1Z60 A;  3RTR B;  3SOU A;  3KNV A;  2HDP A;  3O70 A;  2AN6 A;  5B79 A;  2ECV A;  4I7B A;  4IC3 A;  3GV4 A;  4LKA A;  1WEM A;  3ZTG A;  3ZVY A;  2YUR A;  4A4B A;  3M62 A;  2KRE A;  2LDR A;  5DIN A;  5D1M B;  1E4U A;  1HYJ A;  1JM7 B;  4FIP A;  4LK9 A;  2L0B A;  3U5N A;  3HCS A;  2VJF A;  2G45 A;  2KWO A;  5B77 A;  4FJC A;  5LKU A;  3C6W A;  4FK5 A;  1IYM A;  4BHW A;  4S3O B;  5EYA F;  4AYC B;  3O34 A;  4IC2 A;  3I2D A;  5D1L B;  2KIZ A;  4QF2 A;  2CKL A;  2RSD A;  1N87 A;  3PHD A;  4A4C A;  3N9N A;  1X4J A;  5FB0 A;  1WEE A;  2ECW A;  2F6N A;  4UI9 B;  4LAD B;  4ZUX U;  5B78 A;  3SOX A;  2MA6 A;  4CCG X;  4GNF A;  1MM3 A;  2G43 A;  1HYI A;  4GNE A;  2BAY A;  5KH7 A;  2MIQ A;  4YBM A;  4MSX A;  4S3O C;  2L75 A;  3MHS A;  1U6G B;  1WEW A;  2C2L A;  3EB6 A;  3LQH A;  1WGM A;  4V3L C;  2YUC A;  4TKP B; 
#chains in the Genus database with same CATH topology
 3O35 A;  1VFY A;  2K17 A;  4XI1 A;  2K16 A;  3LQI A;  3DPL R;  4L7X A;  4A0C D;  4QQ4 A;  3O7A A;  2LGL A;  4OGC A;  2MKE A;  2VPD A;  2D8S A;  5G05 B;  5AIT A;  3GL6 A;  5H1U A;  2KWK A;  5TBN A;  1WEO A;  2CON A;  1JM7 A;  2ECN A;  3L11 A;  2LAU A;  2YQM A;  5H1V A;  2LGG A;  2YU4 A;  5FB1 A;  5B75 A;  2MUM A;  2G6Q A;  4C9Z A;  4O64 A;  2VP7 A;  2IDA A;  3FAO A;  5I3L A;  5H9M A;  5DKA A;  3N9L A;  2MNY A;  4N3W A;  1K2F A;  4AYC A;  4R8P K;  4WA6 A;  4QF3 A;  2F6J A;  1WIL A;  1Z2Q A;  3KQI A;  2KKY A;  2KE1 A;  3HCU A;  4WZ0 A;  1MBM A;  3VK6 A;  2KWN A;  1VD4 A;  3SUB A;  2M1R A;  1WIM A;  2YQL A;  3ZPV 1;  5JG6 A;  1WEU A;  4YBT A;  4F52 B;  2FSA A;  4AVX A;  5FEY A;  2JM3 A;  5KH9 A;  3N9P A;  1JOC A;  2H0D B;  2DX8 A;  2PUY A;  2F42 A;  3U5P A;  2YHO A;  4W4U A;  2KR4 A;  3V43 A;  4V3K C;  1WEN A;  4ZDT A;  5C13 A;  3O36 A;  3HCT A;  1F62 A;  2VPE A;  2HYE D;  3DDT A;  3ZYQ A;  5B8D A;  3MHH A;  1LDK C;  2FD4 A;  3FAN A;  5TDW A;  2XP0 A;  3KDE C;  2Y43 A;  4L58 A;  4BBQ A;  2VJE B;  2VJF B;  2LRI C;  3O37 A;  3QZV A;  2M3H A;  4CA1 A;  2L43 A;  2LN0 A;  4WZ3 B;  4FO9 A;  2ECG A;  3U5M A;  2DJA A;  3ASL A;  3M7K A;  1ZBD B;  2M13 A;  3U5O A;  4I7D A;  2FUU A;  2CKL B;  3SOW A;  2EGP A;  3FM8 C;  5C11 A;  4H9D A;  5B76 A;  4B7Y C;  2D8U A;  3ZVZ B;  5G0F A;  4LJN A;  2JRJ A;  2UZG A;  4UP5 A;  3O33 A;  4NN2 A;  1MM2 A;  5KH3 A;  5FER A;  2JMD A;  1CHC A;  4A49 A;  3NG2 A;  2K4D A;  4PPE A;  2LGK A;  2Y1M A;  4GND A;  4AP4 A;  3N9Q A;  5LKT A;  1DVP A;  2QJ0 A;  4X3G A;  3HTK C;  5LKZ A;  1DCQ A;  2XB1 A;  1FBV A;  2RR4 A;  4YAB A;  2E6R A;  5K3Q A;  2DSM A;  2KKX A;  4MVT A;  2IQJ A;  1X4I A;  3RPG B;  2XOY A;  1WFK A;  2Y1N A;  2P57 A;  4B86 C;  3SHB A;  2MD7 B;  2L80 A;  3L1X A;  3DWD A;  2H0D A;  4LLB A;  2FFW A;  3M99 A;  2NAA A;  2VPG A;  2E61 A;  4Q6F A;  2XOC A;  3KV5 A;  2VNF A;  5TAB A;  5SVI A;  3EB5 A;  3T7L A;  1FP0 A;  1V87 A;  2LV9 A;  2XEU A;  2LXP C;  4GNG A;  2KFT A;  3N9O A;  4ZQL A;  4YBS A;  2RI7 A;  2LQ6 A;  1X4U A;  2OXQ C;  3IHP A;  5D1K B;  2VJE A;  3FEH A;  4R7E A;  3N9M A;  4OGE A;  2MNZ A;  2MT5 A;  3C5K A;  3ZNI A;  1WE9 A;  3Q1D A;  2KGG A;  1BOR A;  2CSZ A;  2QIZ A;  2CRR A;  3RPG C;  1G25 A;  4YAT A;  2E6S A;  4GB0 A;  2LXH C;  3ZPV E;  3PUR A;  4YAX A;  4AUQ B;  5LKX A;  3LQJ A;  3M63 A;  2K1J A;  2KU3 A;  3FL2 A;  3DQV R;  2M85 A;  2L5U A;  2PNX A;  5AIU A;  1LDJ B;  4PTB A;  2JMI A;  3PLW A;  2KWJ A;  2CSY A;  2YSM A;  2YSJ A;  5H1T A;  2KGI A;  1RMD A;  2OWA A;  2CRW A;  2JMJ A;  2M6M A;  5G04 B;  4I7C A;  2MD8 C;  2ECT A;  5TRB A;  3FJU B;  2I50 A;  5LCW B;  1T1H A;  2QIC A;  1WEQ A;  1WEP A;  1Z6U A;  4P5O B;  1VYX A;  4YC9 A;  5J3X A;  2JUN A;  1XWH A;  2EGM A;  4UP0 A;  4R2Y A;  2YW8 A;  2VPB A;  2YRE A;  3T6R A;  1WES A;  3JUE A;  2ECI A;  2YYR A;  3LRQ A;  2YT5 A;  2ECJ A;  2EOD A;  5TDR A;  4WZ2 A;  2KYU A;  3PUQ A;  1WEV A;  2C2V S;  5SVX A;  2YHN A;  3L1Z B;  2LGV A;  2FUI A;  2CT2 A;  2ZET C;  2MA5 A;  4N4F A;  4YAD A;  2EA6 A;  3KV6 A;  1Z60 A;  3RTR B;  3SOU A;  3KNV A;  2L7P A;  2HDP A;  3O70 A;  2AN6 A;  5B79 A;  2CSV A;  2ECV A;  2YVR A;  4I7B A;  4IC3 A;  3GV4 A;  4LKA A;  1WEM A;  3ZTG A;  3ZVY A;  2YUR A;  4A4B A;  3M62 A;  2KRE A;  2LDR A;  5DIN A;  5D1M B;  1E4U A;  3LDY A;  1HYJ A;  1JM7 B;  4FIP A;  4O62 A;  2B0O E;  4LK9 A;  2L0B A;  3U5N A;  3HCS A;  2VJF A;  2G45 A;  4Z0O A;  2EXU A;  2KWO A;  5B77 A;  4FJC A;  5LKU A;  3C6W A;  4FK5 A;  1IYM A;  4BHW A;  4S3O B;  5EYA F;  4AYC B;  3O34 A;  4IC2 A;  3I2D A;  5D1L B;  3LJU X;  2KIZ A;  3O47 A;  4QF2 A;  2CKL A;  2RSD A;  1N87 A;  3PHD A;  4A4C A;  3N9N A;  1X4J A;  5FB0 A;  1WEE A;  2ECW A;  2F6N A;  4UI9 B;  4LAD B;  4ZUX U;  5SVI B;  4Z0R A;  5B78 A;  3SOX A;  3LVQ E;  2MA6 A;  4CCG X;  4GNF A;  1MM3 A;  3E2D A;  2G43 A;  1HYI A;  4GNE A;  2BAY A;  5KH7 A;  5SVY A;  2MIQ A;  4YBM A;  4MSX A;  3T9K A;  3LVR E;  4S3O C;  4F1P A;  2L75 A;  3MHS A;  3MDB C;  1U6G B;  1WEW A;  2C2L A;  3EB6 A;  3LQH A;  1WGM A;  3H7H A;  4V3L C;  2YUC A;  2XOZ A;  4TKP B; 
#chains in the Genus database with same CATH homology
 3O35 A;  1VFY A;  2K17 A;  4XI1 A;  2K16 A;  3LQI A;  3DPL R;  4L7X A;  4A0C D;  3O7A A;  2LGL A;  2VPD A;  2D8S A;  5G05 B;  5AIT A;  3GL6 A;  5H1U A;  2KWK A;  5TBN A;  1WEO A;  1JM7 A;  2ECN A;  3L11 A;  2YQM A;  5H1V A;  2LGG A;  2YU4 A;  5FB1 A;  5B75 A;  2MUM A;  2G6Q A;  4C9Z A;  4O64 A;  2VP7 A;  2IDA A;  5I3L A;  5H9M A;  5DKA A;  3N9L A;  2MNY A;  4N3W A;  1K2F A;  4AYC A;  4R8P K;  4WA6 A;  4QF3 A;  2F6J A;  1WIL A;  1Z2Q A;  3KQI A;  2KE1 A;  3HCU A;  4WZ0 A;  3VK6 A;  2KWN A;  1VD4 A;  2M1R A;  1WIM A;  2YQL A;  3ZPV 1;  5JG6 A;  1WEU A;  4YBT A;  4F52 B;  2FSA A;  4AVX A;  5FEY A;  5KH9 A;  3N9P A;  1JOC A;  2H0D B;  2DX8 A;  2PUY A;  2F42 A;  3U5P A;  2YHO A;  4W4U A;  2KR4 A;  3V43 A;  4V3K C;  1WEN A;  4ZDT A;  5C13 A;  3O36 A;  3HCT A;  1F62 A;  2VPE A;  2HYE D;  3ZYQ A;  5B8D A;  3MHH A;  1LDK C;  5TDW A;  2Y43 A;  4L58 A;  4BBQ A;  2VJE B;  2VJF B;  2LRI C;  3O37 A;  3QZV A;  2M3H A;  4CA1 A;  2L43 A;  2LN0 A;  4WZ3 B;  4FO9 A;  2ECG A;  3U5M A;  3ASL A;  1ZBD B;  3U5O A;  4I7D A;  2FUU A;  2CKL B;  3SOW A;  2EGP A;  5C11 A;  5B76 A;  4B7Y C;  3ZVZ B;  5G0F A;  4LJN A;  2JRJ A;  2UZG A;  4UP5 A;  3O33 A;  4NN2 A;  1MM2 A;  5KH3 A;  5FER A;  2JMD A;  1CHC A;  4A49 A;  3NG2 A;  2K4D A;  4PPE A;  2LGK A;  2Y1M A;  4GND A;  4AP4 A;  3N9Q A;  5LKT A;  1DVP A;  2QJ0 A;  4X3G A;  3HTK C;  5LKZ A;  2XB1 A;  1FBV A;  4YAB A;  2E6R A;  4MVT A;  1X4I A;  3RPG B;  1WFK A;  2Y1N A;  4B86 C;  3SHB A;  2MD7 B;  2L80 A;  3L1X A;  2H0D A;  4LLB A;  3M99 A;  2NAA A;  2VPG A;  4Q6F A;  3KV5 A;  2VNF A;  5TAB A;  3EB5 A;  3T7L A;  1FP0 A;  1V87 A;  2LV9 A;  2XEU A;  2LXP C;  4GNG A;  2KFT A;  3N9O A;  4ZQL A;  4YBS A;  2RI7 A;  2LQ6 A;  1X4U A;  2OXQ C;  3IHP A;  5D1K B;  2VJE A;  4R7E A;  3N9M A;  2MNZ A;  2MT5 A;  3C5K A;  3ZNI A;  1WE9 A;  2KGG A;  1BOR A;  2CSZ A;  2QIZ A;  3RPG C;  1G25 A;  4YAT A;  2E6S A;  4GB0 A;  2LXH C;  3ZPV E;  3PUR A;  4YAX A;  4AUQ B;  5LKX A;  3LQJ A;  3M63 A;  2K1J A;  2KU3 A;  3FL2 A;  3DQV R;  2M85 A;  2L5U A;  2PNX A;  5AIU A;  1LDJ B;  4PTB A;  2JMI A;  2KWJ A;  2CSY A;  2YSM A;  2YSJ A;  5H1T A;  2KGI A;  1RMD A;  2JMJ A;  2M6M A;  5G04 B;  4I7C A;  2MD8 C;  2ECT A;  5TRB A;  2I50 A;  5LCW B;  1T1H A;  2QIC A;  1WEQ A;  1WEP A;  1Z6U A;  4P5O B;  1VYX A;  4YC9 A;  5J3X A;  1XWH A;  4UP0 A;  4R2Y A;  2YW8 A;  2VPB A;  2YRE A;  3T6R A;  1WES A;  2ECI A;  2YYR A;  3LRQ A;  2YT5 A;  2ECJ A;  2EOD A;  5TDR A;  4WZ2 A;  2KYU A;  3PUQ A;  1WEV A;  2C2V S;  2YHN A;  3L1Z B;  2LGV A;  2FUI A;  2CT2 A;  2ZET C;  2MA5 A;  4N4F A;  4YAD A;  2EA6 A;  3KV6 A;  1Z60 A;  3RTR B;  3SOU A;  3KNV A;  2HDP A;  3O70 A;  2AN6 A;  5B79 A;  2ECV A;  4I7B A;  4IC3 A;  3GV4 A;  4LKA A;  1WEM A;  3ZTG A;  3ZVY A;  2YUR A;  4A4B A;  3M62 A;  2KRE A;  2LDR A;  5DIN A;  5D1M B;  1E4U A;  1HYJ A;  1JM7 B;  4FIP A;  4LK9 A;  2L0B A;  3U5N A;  3HCS A;  2VJF A;  2G45 A;  2KWO A;  5B77 A;  4FJC A;  5LKU A;  3C6W A;  4FK5 A;  1IYM A;  4BHW A;  4S3O B;  5EYA F;  4AYC B;  3O34 A;  4IC2 A;  3I2D A;  5D1L B;  2KIZ A;  4QF2 A;  2CKL A;  2RSD A;  1N87 A;  3PHD A;  4A4C A;  3N9N A;  1X4J A;  5FB0 A;  1WEE A;  2ECW A;  2F6N A;  4UI9 B;  4LAD B;  4ZUX U;  5B78 A;  3SOX A;  2MA6 A;  4CCG X;  4GNF A;  1MM3 A;  2G43 A;  1HYI A;  4GNE A;  2BAY A;  5KH7 A;  2MIQ A;  4YBM A;  4MSX A;  4S3O C;  2L75 A;  3MHS A;  1U6G B;  1WEW A;  2C2L A;  3EB6 A;  3LQH A;  1WGM A;  4V3L C;  2YUC A;  4TKP B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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