2L7PA

Ashh2 a cw domain
Total Genus 8

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
8
sequence length
100
structure length
100
Chain Sequence
GSRRASVGSEFMVVDVTIEDSYSTESAWVRCDDCFKWRRIPASVVGSIDESSRWICMNNSDKRFADCSKSQEMSNEEINEELGIGQDEADAYDCDAAKRG

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (27-31)EMPTYTIV2 (31-34)S2 (36-40)TIV9 (61-64)TI1 (41-44)TI2 (42-45)TIV5 (45-48)TIV8 (49-52)TI5 (66-69)TI6 (95-98)TI3 (44-47)3H1 (56-58)AH1 (75-82)Updating...
connected with : NaN
molecule tags Transferase
source organism Arabidopsis thaliana
publication title The CW domain, a new histone recognition module in chromatin proteins.
pubmed doi rcsb
molecule keywords Histone-lysine N-methyltransferase ASHH2
total genus 8
structure length 100
sequence length 100
ec nomenclature ec 2.1.1.43: Histone-lysine N-methyltransferase.
pdb deposition date 2010-12-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07496 zf-CW CW-type Zinc Finger
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.40.100 Alpha Beta 2-Layer Sandwich Herpes Virus-1 Herpes Virus-1 2l7pA00
2RR4A 2L7PA 5SVIB 5SVXA 5SVYA 2E61A 4Z0OA 4Z0RA 5SVIA 4QQ4A 4O62A
chains in the Genus database with same CATH superfamily
4YADA 3EB5A 5B8DA 4GNFA 2ECVA 4Z0RA 2KWKA 2DX8A 4I7CA 3O7AA 4L58A 4WA6A 4V3LC 1WIMA 5D1KB 3LVRE 1ZBDB 2CRRA 1VFYA 3Q1DA 2YU4A 4XI1A 4IC3A 2IQJA 5B78A 3LVQE 3T9KA 5LKTA 4F1PA 3ZVZB 1VYXA 1WEMA 5LCWB 3DPLR 3T6RA 3O35A 1XWHA 3O37A 2OWAA 5LKUA 2JM3A 4AYCA 2VJEA 2LXHC 1WENA 2B0OE 3LQJA 4YAXA 2L5UA 2MKEA 2QICA 5C11A 2M1RA 4BHWA 2KGIA 4OGCA 4C9ZA 2CRWA 4W4UA 4YC9A 1WEWA 3NG2A 5D1LB 2VPDA 4OGEA 5D1MB 2RR4A 3ZTGA 2E6SA 4I7DA 2XP0A 4L7XA 1IYMA 2D8SA 3HCSA 2P57A 1WEQA 3DQVR 5G04B 4GNDA 1RMDA 1WE9A 5EYAF 5FB1A 2KFTA 4YBSA 4GNEA 3EB6A 2QIZA 2M3HA 4AVXA 2XEUA 4QF2A 4X3GA 2KU3A 3PUQA 5H9MA 4AUQB 4ZQLA 2RI7A 2H0DA 4FJCA 2KE1A 1Z60A 3VK6A 1F62A 5TDWA 3LQHA 5H1VA 4CA1A 2EODA 3ZYQA 2VPEA 2LN0A 2EGMA 3DWDA 3O36A 4UP0A 4YBTA 3C5KA 4WZ0A 3U5NA 1WILA 2K4DA 2KKXA 4IC2A 3SOWA 5LKZA 2VPBA 1MBMA 2CT2A 4Q6FA 4FO9A 5LKXA 3M99A 2M6MA 3ZPVE 2MNZA 5G0FA 5B77A 3KNVA 5TDRA 2VJFB 2L75A 2IDAA 5B75A 4R8PK 5KH7A 1CHCA 5SVXA 1K2FA 3MHHA 2JMJA 1JOCA 1T1HA 2ZETC 2C2LA 4A0CD 3SOXA 4B86C 3U5PA 2EGPA 4LADB 2ECNA 1U6GB 3MHSA 3KQIA 3FEHA 2F6JA 2Y43A 2D8UA 2MA5A 4LLBA 3FJUB 2VP7A 2MA6A 5TBNA 3T7LA 2LGGA 2FFWA 1WFKA 2XOYA 3O34A 3L1XA 3H7HA 4H9DA 3SHBA 2MUMA 2Y1NA 2XB1A 2JMDA 1WESA 4PPEA 1DVPA 2E6RA 5DINA 4A49A 4UI9B 3HCTA 2LGVA 1FP0A 4WZ2A 4CCGX 3L1ZB 2MT5A 2OXQC 3L11A 4GB0A 2HYED 2F42A 2LV9A 2NAAA 2KWJA 2XOCA 2JRJA 1Z2QA 4FIPA 3SOUA 4QQ4A 2DSMA 2YHNA 5J3XA 4ZDTA 3FAOA 1LDKC 2LAUA 2JUNA 2KGGA 4O62A 2L7PA 4V3KC 3FM8C 2L43A 1WEOA 4I7BA 2PNXA 3HCUA 1LDJB 3U5OA 3KV6A 2ECTA 5SVIA 1WEPA 5H1UA 2H0DB 2CSZA 3MDBC 4MVTA 2KWOA 3N9NA 3RPGB 2C2VS 2KREA 1WEUA 4S3OB 2XOZA 3N9LA 1MM3A 2G6QA 3C6WA 3PHDA 1E4UA 3I2DA 4QF3A 2AN6A 2YVRA 5B79A 2MD7B 4LKAA 1HYJA 2CKLB 5C13A 3JUEA 2FUIA 2JMIA 3M62A 2K1JA 4TKPB 1JM7B 2I50A 3PURA 3SUBA 3HTKC 3KDEC 2KWNA 2YT5A 4N3WA 2PUYA 4BBQA 2YQLA 2YYRA 3GV4A 4GNGA 2M85A 4LK9A 2MNYA 2VPGA 5TABA 2FD4A 4FK5A 4R2YA 2G45A 2BAYA 2L0BA 2QJ0A 5I3LA 2KR4A 2ECGA 2EA6A 3V43A 5AITA 4NN2A 2LGLA 3O70A 5G05B 3RPGC 3RTRB 2ECWA 4A4BA 4YABA 4ZUXU 4S3OC 2CONA 2LGKA 3O47A 1X4JA 2YQMA 1N87A 2ECIA 1WEEA 2EXUA 2MD8C 5TRBA 1HYIA 1FBVA 3FANA 4P5OB 4AYCB 3N9QA 2VJEB 2UZGA 2YSJA 2F6NA 4R7EA 4N4FA 2LDRA 4WZ3B 4LJNA 2LQ6A 3IHPA 3M7KA 2YW8A 1BORA 1DCQA 2DJAA 1G25A 1WGMA 3LJUX 5FERA 3O33A 5AIUA 2G43A 3GL6A 2YSMA 3FL2A 1WEVA 4B7YC 2KIZA 2YUCA 3U5MA 2KKYA 5SVYA 2CSYA 1V87A 4YBMA 4Z0OA 4O64A 5JG6A 3QZVA 3N9OA 3N9MA 3LDYA 5KH3A 3ZNIA 5DKAA 2L80A 2E61A 2CSVA 2FSAA 3N9PA 2LRIC 3LRQA 3DDTA 2KYUA 3LQIA 4AP4A 2Y1MA 2LXPC 5B76A 2RSDA 2YURA 5KH9A 5H1TA 4F52B 4A4CA 2VNFA 5SVIB 4YATA 2YHOA 3ZPV1 4MSXA 2YREA 2ECJA 3KV5A 1MM2A 3E2DA 4UP5A 2M13A 5FB0A 2K17A 3M63A 1X4IA 5FEYA 3ASLA 1X4UA 5K3QA 2MIQA 4PTBA 2VJFA 3PLWA 2CKLA 1Z6UA 3ZVYA 2FUUA 2K16A 1VD4A 1JM7A 2HDPA
chains in the Genus database with same CATH topology
1DCQA 2DJAA 2D8UA 2CONA 2IQJA 3O47A 3E2DA 2E61A 2CSVA 2M13A 3LJUX 4OGCA 2CRWA 2EGMA 3LVQE 5SVIA 3DWDA 3Q1DA 2YVRA 2EXUA 4QQ4A 3T9KA 2FD4A 3FJUB 3DDTA 5SVXA 4F1PA 3MDBC 2LAUA 4OGEA 4Z0RA 2FFWA 2JUNA 3JUEA 4O62A 2RR4A 5K3QA 2L7PA 2XOYA 2KKXA 2KKYA 5SVYA 3H7HA 2OWAA 2XP0A 4H9DA 4Z0OA 3FM8C 2JM3A 3SUBA 2P57A 3KDEC 3LVRE 3PLWA 2XOZA 5SVIB 2CRRA 2B0OE 2YREA 3M7KA 3FEHA 2MKEA 2XOCA 3LDYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2RR4 A;  2L7P A;  5SVI B;  5SVX A;  5SVY A;  2E61 A;  4Z0O A;  4Z0R A;  5SVI A;  4QQ4 A;  4O62 A; 
#chains in the Genus database with same CATH topology
 4YAD A;  3EB5 A;  5B8D A;  4GNF A;  2ECV A;  4Z0R A;  2KWK A;  2DX8 A;  4I7C A;  3O7A A;  4L58 A;  4WA6 A;  4V3L C;  1WIM A;  5D1K B;  3LVR E;  1ZBD B;  2CRR A;  1VFY A;  3Q1D A;  2YU4 A;  4XI1 A;  4IC3 A;  2IQJ A;  5B78 A;  3LVQ E;  3T9K A;  5LKT A;  4F1P A;  3ZVZ B;  1VYX A;  1WEM A;  5LCW B;  3DPL R;  3T6R A;  3O35 A;  1XWH A;  3O37 A;  2OWA A;  5LKU A;  2JM3 A;  4AYC A;  2VJE A;  2LXH C;  1WEN A;  2B0O E;  3LQJ A;  4YAX A;  2L5U A;  2MKE A;  2QIC A;  5C11 A;  2M1R A;  4BHW A;  2KGI A;  4OGC A;  4C9Z A;  2CRW A;  4W4U A;  4YC9 A;  1WEW A;  3NG2 A;  5D1L B;  2VPD A;  4OGE A;  5D1M B;  2RR4 A;  3ZTG A;  2E6S A;  4I7D A;  2XP0 A;  4L7X A;  1IYM A;  2D8S A;  3HCS A;  2P57 A;  1WEQ A;  3DQV R;  5G04 B;  4GND A;  1RMD A;  1WE9 A;  5EYA F;  5FB1 A;  2KFT A;  4YBS A;  4GNE A;  3EB6 A;  2QIZ A;  2M3H A;  4AVX A;  2XEU A;  4QF2 A;  4X3G A;  2KU3 A;  3PUQ A;  5H9M A;  4AUQ B;  4ZQL A;  2RI7 A;  2H0D A;  4FJC A;  2KE1 A;  1Z60 A;  3VK6 A;  1F62 A;  5TDW A;  3LQH A;  5H1V A;  4CA1 A;  2EOD A;  3ZYQ A;  2VPE A;  2LN0 A;  2EGM A;  3DWD A;  3O36 A;  4UP0 A;  4YBT A;  3C5K A;  4WZ0 A;  3U5N A;  1WIL A;  2K4D A;  2KKX A;  4IC2 A;  3SOW A;  5LKZ A;  2VPB A;  1MBM A;  2CT2 A;  4Q6F A;  4FO9 A;  5LKX A;  3M99 A;  2M6M A;  3ZPV E;  2MNZ A;  5G0F A;  5B77 A;  3KNV A;  5TDR A;  2VJF B;  2L75 A;  2IDA A;  5B75 A;  4R8P K;  5KH7 A;  1CHC A;  5SVX A;  1K2F A;  3MHH A;  2JMJ A;  1JOC A;  1T1H A;  2ZET C;  2C2L A;  4A0C D;  3SOX A;  4B86 C;  3U5P A;  2EGP A;  4LAD B;  2ECN A;  1U6G B;  3MHS A;  3KQI A;  3FEH A;  2F6J A;  2Y43 A;  2D8U A;  2MA5 A;  4LLB A;  3FJU B;  2VP7 A;  2MA6 A;  5TBN A;  3T7L A;  2LGG A;  2FFW A;  1WFK A;  2XOY A;  3O34 A;  3L1X A;  3H7H A;  4H9D A;  3SHB A;  2MUM A;  2Y1N A;  2XB1 A;  2JMD A;  1WES A;  4PPE A;  1DVP A;  2E6R A;  5DIN A;  4A49 A;  4UI9 B;  3HCT A;  2LGV A;  1FP0 A;  4WZ2 A;  4CCG X;  3L1Z B;  2MT5 A;  2OXQ C;  3L11 A;  4GB0 A;  2HYE D;  2F42 A;  2LV9 A;  2NAA A;  2KWJ A;  2XOC A;  2JRJ A;  1Z2Q A;  4FIP A;  3SOU A;  4QQ4 A;  2DSM A;  2YHN A;  5J3X A;  4ZDT A;  3FAO A;  1LDK C;  2LAU A;  2JUN A;  2KGG A;  4O62 A;  2L7P A;  4V3K C;  3FM8 C;  2L43 A;  1WEO A;  4I7B A;  2PNX A;  3HCU A;  1LDJ B;  3U5O A;  3KV6 A;  2ECT A;  5SVI A;  1WEP A;  5H1U A;  2H0D B;  2CSZ A;  3MDB C;  4MVT A;  2KWO A;  3N9N A;  3RPG B;  2C2V S;  2KRE A;  1WEU A;  4S3O B;  2XOZ A;  3N9L A;  1MM3 A;  2G6Q A;  3C6W A;  3PHD A;  1E4U A;  3I2D A;  4QF3 A;  2AN6 A;  2YVR A;  5B79 A;  2MD7 B;  4LKA A;  1HYJ A;  2CKL B;  5C13 A;  3JUE A;  2FUI A;  2JMI A;  3M62 A;  2K1J A;  4TKP B;  1JM7 B;  2I50 A;  3PUR A;  3SUB A;  3HTK C;  3KDE C;  2KWN A;  2YT5 A;  4N3W A;  2PUY A;  4BBQ A;  2YQL A;  2YYR A;  3GV4 A;  4GNG A;  2M85 A;  4LK9 A;  2MNY A;  2VPG A;  5TAB A;  2FD4 A;  4FK5 A;  4R2Y A;  2G45 A;  2BAY A;  2L0B A;  2QJ0 A;  5I3L A;  2KR4 A;  2ECG A;  2EA6 A;  3V43 A;  5AIT A;  4NN2 A;  2LGL A;  3O70 A;  5G05 B;  3RPG C;  3RTR B;  2ECW A;  4A4B A;  4YAB A;  4ZUX U;  4S3O C;  2CON A;  2LGK A;  3O47 A;  1X4J A;  2YQM A;  1N87 A;  2ECI A;  1WEE A;  2EXU A;  2MD8 C;  5TRB A;  1HYI A;  1FBV A;  3FAN A;  4P5O B;  4AYC B;  3N9Q A;  2VJE B;  2UZG A;  2YSJ A;  2F6N A;  4R7E A;  4N4F A;  2LDR A;  4WZ3 B;  4LJN A;  2LQ6 A;  3IHP A;  3M7K A;  2YW8 A;  1BOR A;  1DCQ A;  2DJA A;  1G25 A;  1WGM A;  3LJU X;  5FER A;  3O33 A;  5AIU A;  2G43 A;  3GL6 A;  2YSM A;  3FL2 A;  1WEV A;  4B7Y C;  2KIZ A;  2YUC A;  3U5M A;  2KKY A;  5SVY A;  2CSY A;  1V87 A;  4YBM A;  4Z0O A;  4O64 A;  5JG6 A;  3QZV A;  3N9O A;  3N9M A;  3LDY A;  5KH3 A;  3ZNI A;  5DKA A;  2L80 A;  2E61 A;  2CSV A;  2FSA A;  3N9P A;  2LRI C;  3LRQ A;  3DDT A;  2KYU A;  3LQI A;  4AP4 A;  2Y1M A;  2LXP C;  5B76 A;  2RSD A;  2YUR A;  5KH9 A;  5H1T A;  4F52 B;  4A4C A;  2VNF A;  5SVI B;  4YAT A;  2YHO A;  3ZPV 1;  4MSX A;  2YRE A;  2ECJ A;  3KV5 A;  1MM2 A;  3E2D A;  4UP5 A;  2M13 A;  5FB0 A;  2K17 A;  3M63 A;  1X4I A;  5FEY A;  3ASL A;  1X4U A;  5K3Q A;  2MIQ A;  4PTB A;  2VJF A;  3PLW A;  2CKL A;  1Z6U A;  3ZVY A;  2FUU A;  2K16 A;  1VD4 A;  1JM7 A;  2HDP A; 
#chains in the Genus database with same CATH homology
 1DCQ A;  2DJA A;  2D8U A;  2CON A;  2IQJ A;  3O47 A;  3E2D A;  2E61 A;  2CSV A;  2M13 A;  3LJU X;  4OGC A;  2CRW A;  2EGM A;  3LVQ E;  5SVI A;  3DWD A;  3Q1D A;  2YVR A;  2EXU A;  4QQ4 A;  3T9K A;  2FD4 A;  3FJU B;  3DDT A;  5SVX A;  4F1P A;  3MDB C;  2LAU A;  4OGE A;  4Z0R A;  2FFW A;  2JUN A;  3JUE A;  4O62 A;  2RR4 A;  5K3Q A;  2L7P A;  2XOY A;  2KKX A;  2KKY A;  5SVY A;  3H7H A;  2OWA A;  2XP0 A;  4H9D A;  4Z0O A;  3FM8 C;  2JM3 A;  3SUB A;  2P57 A;  3KDE C;  3LVR E;  3PLW A;  2XOZ A;  5SVI B;  2CRR A;  2B0O E;  2YRE A;  3M7K A;  3FEH A;  2MKE A;  2XOC A;  3LDY A; 
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