2QJ0A

Structure of the yeast u-box-containing ubiquitin ligase ufd2p
Total Genus 318
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
318
sequence length
957
structure length
937
Chain Sequence
GSEFRSMTAIEDILQITTDPSDTRGYSLLKSLGVDFIDTLLLYQLTENEKLDKPFEYLNDCFRRNQQQKRITKNKPNAESLHSTFQEIDRLVIGYGVVALQIENFCMNGAFINYITGIVSNVNSYTDFLSQIIQRAILEGTALDLLNAVFPTLLEYCNKHVSHFDLNESVIYNNVLTIFELFVTFKPIAEIFTKIDGFFADYSCKPQDFERKTILGPILSLSPIEAAVAIRNYGDNLLRSKQQTAMIHESLQAEHKVVIDRLFFIVDKLVRGSLNSRTDMISYFAHIANKNHLRRADHPPFKELSSNGFMSNITLLLVRFSQPFLDISYKKIDKIDANYFNNPSLFIDLSGETRLNSDFKEADAFYDKNRKTADSKPNFISDCFFLTLTYLHYGLGGTLSFEEKMGSEIKALKEEIEKVKKIAANHDVFARFITAQLSKMEKALKTTESLRFALQGFFAHRSLQLEVFDFICGASTFLIRVVDPEHEFPFKQIKLPLIPDQIGVENVDNADFLRAHAPVPFKYYPEFVVEGPVNYSLYISKYQTSPIFRNPRLGSFVEFTTMVLRCPELVSNPHLKGKLVQLLSVGAMPLTDNSPGFMMDIFEHDELVNKNLLYALLDFYVIVEKTGSSSQFYDKFNSRYSISIILEELYYKIPSYKNQLIWQSQNNADFFVRFVARMLNDLTFLLDEGLSNLAEVHNIQNELDEDKELQTRLASASRQAKSSCGLADKSMKLFEIYSKDIPAAFVTPEIVYRLASMLNYNLESLVGPKCGELKVKDPQSYSFNPKDLLKALTTVYINLSEQSEFISAVAKDERSFNRNLFVRAVDILGRKTGLASPEFIEKLLNFANKAEEQRKADEEEDLEYGDVPDEFLDPLMYTIMKDPVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDVTPNEELRQKILCFKKQK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Inaugural Article: Structure and function of the yeast U-box-containing ubiquitin ligase Ufd2p.
pubmed doi rcsb
molecule tags Ligase
source organism Saccharomyces cerevisiae
molecule keywords Ubiquitin conjugation factor E4
total genus 318
structure length 937
sequence length 957
ec nomenclature ec 2.3.2.27: RING-type E3 ubiquitin transferase.
pdb deposition date 2007-07-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF04564 U-box U-box domain
A PF10408 Ufd2P_core Ubiquitin elongating factor core
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.40.10 Alpha Beta 2-Layer Sandwich Herpes Virus-1 Zinc/RING finger domain, C3HC4 (zinc finger) 2qj0A02
2YSMA 1DVPA 4BBQA 4WZ2A 2MNYA 2L80A 5I3LA 4LADB 3IHPA 1WFKA 4S3OB 4GNGA 4FK5A 2M85A 2YQMA 2G43A 4I7BA 4N4FA 2RSDA 4R7EA 2LGLA 2FUIA 2F42A 3N9NA 4F52B 4MSXA 2EA6A 2YURA 2LXHC 1X4IA 1WEQA 2ECGA 3HCSA 2E6SA 3O34A 5B75A 1HYJA 4O64A 4IC3A 2LV9A 2NAAA 2VPBA 1K2FA 3M62A 4R8PK 2K4DA 1X4UA 4FIPA 5B79A 5G04B 5TDWA 2HYED 2M6MA 3U5PA 1CHCA 3ZVYA 4NN2A 5TBNA 1X4JA 3LQHA 3KNVA 2MD8C 2G6QA 2D8SA 4A4BA 2C2LA 2G45A 3O37A 3O7AA 4L7XA 3L11A 4LJNA 5FB0A 5LCWB 2I50A 2Y43A 2LGKA 2YHNA 2KWJA 3I2DA 2MIQA 5DKAA 3L1XA 5B8DA 4UP5A 4ZUXU 3PUQA 1IYMA 4PTBA 2OXQC 4PPEA 2PNXA 2KFTA 1MM2A 4IC2A 4W4UA 2KYUA 5AIUA 1VD4A 4B86C 2L0BA 4GB0A 4YATA 1MM3A 2CKLB 3U5NA 2QIZA 3U5OA 3GV4A 5H1VA 2IDAA 2VPGA 2H0DB 4LKAA 3LQIA 1VYXA 5LKUA 2LRIC 2YW8A 4XI1A 1ZBDB 2K17A 4LK9A 2L5UA 3MHHA 1LDKC 3M99A 2LGGA 2Y1NA 5B78A 2ECJA 2VJFB 3N9OA 3HTKC 2KWOA 2KWKA 4QF2A 2KE1A 5FERA 2MNZA 5LKXA 2RI7A 3ZYQA 1T1HA 4YABA 4FO9A 4V3LC 3ZTGA 1VFYA 3O70A 1JM7B 3RPGB 1XWHA 3SOUA 1WEWA 2QICA 1FBVA 2ECIA 5TDRA 2EODA 1LDJB 3ZNIA 5KH9A 1V87A 2KREA 2YSJA 4UP0A 1RMDA 5TABA 4YBSA 2YYRA 2BAYA 3N9PA 4QF3A 2CSZA 2CSYA 1WEMA 4A49A 3HCUA 1WGMA 3O36A 2M1RA 3SOWA 2VJEB 4Q6FA 2JMIA 5EYAF 4A0CD 4AVXA 2EGPA 3SHBA 3L1ZB 2YHOA 1N87A 2L75A 3NG2A 2YUCA 2PUYA 5KH3A 5C13A 4R2YA 2VP7A 2XEUA 5D1LB 4YAXA 2AN6A 2YT5A 2VNFA 2HDPA 4WZ0A 2KU3A 2CKLA 2C2VS 4YC9A 5B76A 4CA1A 2UZGA 1WE9A 2DX8A 2H0DA 2LXPC 3N9LA 3PHDA 5H9MA 3KV6A 2MUMA 5J3XA 3EB6A 1WIMA 4ZQLA 1WILA 4YBTA 3RTRB 2VJFA 5D1MB 4AYCB 1WEUA 3O35A 1WENA 2YREA 4GNFA 2MD7B 2K16A 2K1JA 3U5MA 5AITA 4LLBA 2KGGA 2KGIA 1WESA 2FUUA 5TRBA 2YQLA 4TKPB 4P5OB 4V3KC 3V43A 2L43A 3ZVZB 4FJCA 2QJ0A 2KIZA 2VPDA 5FEYA 4CCGX 1JM7A 1WEVA 2ECTA 4YADA 3N9QA 3ZPVE 3SOXA 3KQIA 1U6GB 1Z2QA 5FB1A 4AP4A 2F6NA 2ECVA 4GNDA 4UI9B 3LRQA 2FSAA 4B7YC 4N3WA 3C5KA 4S3OC 5C11A 4WZ3B 4C9ZA 5JG6A 1FP0A 3T6RA 3HCTA 3MHSA 2MT5A 1WEOA 2VJEA 4MVTA 2MA5A 5DINA 1WEEA 3DQVR 4I7CA 2MA6A 4AUQB 3KV5A 3M63A 4X3GA 2M3HA 2E6RA 2CT2A 3N9MA 1JOCA 2JRJA 4ZDTA 5D1KB 3T7LA 1Z6UA 2LN0A 5KH7A 2XB1A 1G25A 2YU4A 4A4CA 2Y1MA 3PURA 1BORA 3ZPV1 1Z60A 3FL2A 4BHWA 3RPGC 2F6JA 3VK6A 4GNEA 3EB5A 5LKTA 2KWNA 1F62A 5H1TA 2ECNA 3O33A 3DPLR 5G0FA 2LQ6A 4I7DA 2LGVA 2JMJA 3C6WA 1E4UA 3QZVA 4YBMA 3ASLA 5B77A 3GL6A 5LKZA 4L58A 2KR4A 2ECWA 1WEPA 2JMDA 5H1UA 4WA6A 2LDRA 4AYCA 2ZETC 3LQJA 1HYIA 2VPEA 5G05B
chains in the Genus database with same CATH superfamily
2YSMA 1DVPA 4BBQA 4WZ2A 2MNYA 2L80A 5I3LA 4LADB 3IHPA 1WFKA 4S3OB 4GNGA 2JUNA 4FK5A 2M85A 2YQMA 2G43A 4I7BA 4N4FA 2RSDA 4R7EA 2LGLA 2FUIA 2F42A 3N9NA 4F52B 4MSXA 2EA6A 2YURA 2LXHC 1X4IA 1WEQA 2ECGA 2RR4A 3HCSA 2E6SA 3O34A 5B75A 1HYJA 2FD4A 3LVRE 4O64A 4IC3A 2LV9A 2NAAA 2VPBA 3DWDA 2OWAA 1K2FA 3M62A 4R8PK 2KKXA 2K4DA 1X4UA 4FIPA 5B79A 5G04B 4O62A 5TDWA 2HYED 2M6MA 3U5PA 1CHCA 3ZVYA 4NN2A 5TBNA 2CRRA 3M7KA 1X4JA 3LQHA 3KNVA 2MD8C 2G6QA 2D8SA 4A4BA 2C2LA 2G45A 3H7HA 3O37A 2P57A 3O7AA 4L7XA 2FFWA 3L11A 4LJNA 4H9DA 5FB0A 5LCWB 2I50A 2Y43A 2LGKA 2YHNA 2KWJA 3I2DA 2MIQA 5DKAA 3L1XA 5B8DA 4UP5A 4ZUXU 3PUQA 1IYMA 4PTBA 2OXQC 4PPEA 2PNXA 2KFTA 1MM2A 4IC2A 4W4UA 2KYUA 5AIUA 1VD4A 3LJUX 4B86C 2XOZA 4Z0RA 2XP0A 2L0BA 4GB0A 4YATA 1MM3A 3PLWA 5SVXA 2CKLB 3U5NA 2QIZA 3U5OA 3GV4A 5H1VA 2IDAA 2VPGA 3JUEA 2H0DB 4LKAA 2LAUA 3LQIA 1VYXA 5LKUA 2LRIC 2YW8A 4XI1A 1ZBDB 2K17A 4LK9A 2L5UA 3MHHA 1LDKC 3M99A 2LGGA 2Y1NA 5B78A 2ECJA 2VJFB 3N9OA 2DSMA 3HTKC 2KWOA 4F1PA 2IQJA 2KWKA 4QF2A 2KE1A 5FERA 2MNZA 2XOYA 5LKXA 2RI7A 3ZYQA 4OGCA 1T1HA 4YABA 4FO9A 3FJUB 4V3LC 3ZTGA 1VFYA 3O70A 1JM7B 3DDTA 3RPGB 1XWHA 3SOUA 1WEWA 2QICA 1FBVA 2ECIA 5TDRA 2EODA 1LDJB 3ZNIA 5KH9A 1V87A 2KREA 2YSJA 4UP0A 2XOCA 1RMDA 5TABA 4YBSA 3FAOA 2YYRA 2BAYA 3N9PA 4QF3A 2CSZA 2CSYA 1WEMA 4A49A 3HCUA 1WGMA 3O36A 5SVIB 2B0OE 2M1RA 3SOWA 2VJEB 4Q6FA 4OGEA 2JMIA 5EYAF 4A0CD 3LVQE 4AVXA 2EGPA 3SHBA 3L1ZB 2YHOA 1N87A 2L75A 3NG2A 2YUCA 2PUYA 5KH3A 5C13A 4R2YA 2VP7A 2XEUA 5D1LB 4YAXA 2AN6A 2YT5A 2VNFA 2HDPA 3KDEC 4QQ4A 4WZ0A 2KU3A 2CKLA 2C2VS 4YC9A 5B76A 4CA1A 2UZGA 1MBMA 2YVRA 1WE9A 2DX8A 2H0DA 2LXPC 2EGMA 3N9LA 3PHDA 5H9MA 3SUBA 2CSVA 3KV6A 1DCQA 2MUMA 5J3XA 3E2DA 3EB6A 2L7PA 1WIMA 4ZQLA 1WILA 4YBTA 3RTRB 2VJFA 5D1MB 4AYCB 1WEUA 3O35A 1WENA 2YREA 4GNFA 2MD7B 2K16A 2K1JA 3U5MA 3O47A 5AITA 4LLBA 2KGGA 5SVYA 2KGIA 3Q1DA 1WESA 2FUUA 5TRBA 2YQLA 4TKPB 4P5OB 4V3KC 3V43A 2L43A 3ZVZB 4FJCA 2QJ0A 2KIZA 2VPDA 5FEYA 4CCGX 1JM7A 1WEVA 2ECTA 4YADA 3N9QA 3ZPVE 3FM8C 3SOXA 3KQIA 1U6GB 1Z2QA 2DJAA 5FB1A 4AP4A 2F6NA 2ECVA 4GNDA 4UI9B 3LDYA 2CONA 3LRQA 2FSAA 4B7YC 4Z0OA 4N3WA 3FEHA 3C5KA 4S3OC 5C11A 5K3QA 4WZ3B 4C9ZA 5JG6A 1FP0A 3T6RA 3HCTA 3MHSA 5SVIA 2MT5A 2JM3A 1WEOA 2VJEA 4MVTA 2MA5A 3T9KA 5DINA 1WEEA 3DQVR 4I7CA 2MA6A 4AUQB 3KV5A 3M63A 4X3GA 2M3HA 2E6RA 2CT2A 3N9MA 1JOCA 2JRJA 4ZDTA 5D1KB 2MKEA 3T7LA 1Z6UA 2LN0A 5KH7A 2XB1A 1G25A 2YU4A 4A4CA 2Y1MA 3PURA 1BORA 3ZPV1 1Z60A 3FL2A 4BHWA 2E61A 3RPGC 2F6JA 3MDBC 3VK6A 4GNEA 3EB5A 5LKTA 2KWNA 3FANA 1F62A 5H1TA 2ECNA 3O33A 3DPLR 5G0FA 2LQ6A 4I7DA 2D8UA 2LGVA 2JMJA 3C6WA 1E4UA 2KKYA 3QZVA 4YBMA 2EXUA 3ASLA 5B77A 3GL6A 5LKZA 4L58A 2KR4A 2CRWA 2ECWA 1WEPA 2JMDA 5H1UA 4WA6A 2LDRA 2M13A 4AYCA 2ZETC 3LQJA 1HYIA 2VPEA 5G05B
chains in the Genus database with same CATH topology
2YSMA 1DVPA 4BBQA 4WZ2A 2MNYA 2L80A 5I3LA 4LADB 3IHPA 1WFKA 4S3OB 4GNGA 4FK5A 2M85A 2YQMA 2G43A 4I7BA 4N4FA 2RSDA 4R7EA 2LGLA 2FUIA 2F42A 3N9NA 4F52B 4MSXA 2EA6A 2YURA 2LXHC 1X4IA 1WEQA 2ECGA 3HCSA 2E6SA 3O34A 5B75A 1HYJA 4O64A 4IC3A 2LV9A 2NAAA 2VPBA 1K2FA 3M62A 4R8PK 2K4DA 1X4UA 4FIPA 5B79A 5G04B 5TDWA 2HYED 2M6MA 3U5PA 1CHCA 3ZVYA 4NN2A 5TBNA 1X4JA 3LQHA 3KNVA 2MD8C 2G6QA 2D8SA 4A4BA 2C2LA 2G45A 3O37A 3O7AA 4L7XA 3L11A 4LJNA 5FB0A 5LCWB 2I50A 2Y43A 2LGKA 2YHNA 2KWJA 3I2DA 2MIQA 5DKAA 3L1XA 5B8DA 4UP5A 4ZUXU 3PUQA 1IYMA 4PTBA 2OXQC 4PPEA 2PNXA 2KFTA 1MM2A 4IC2A 4W4UA 2KYUA 5AIUA 1VD4A 4B86C 2L0BA 4GB0A 4YATA 1MM3A 2CKLB 3U5NA 2QIZA 3U5OA 3GV4A 5H1VA 2IDAA 2VPGA 2H0DB 4LKAA 3LQIA 1VYXA 5LKUA 2LRIC 2YW8A 4XI1A 1ZBDB 2K17A 4LK9A 2L5UA 3MHHA 1LDKC 3M99A 2LGGA 2Y1NA 5B78A 2ECJA 2VJFB 3N9OA 3HTKC 2KWOA 2KWKA 4QF2A 2KE1A 5FERA 2MNZA 5LKXA 2RI7A 3ZYQA 1T1HA 4YABA 4FO9A 4V3LC 3ZTGA 1VFYA 3O70A 1JM7B 3RPGB 1XWHA 3SOUA 1WEWA 2QICA 1FBVA 2ECIA 5TDRA 2EODA 1LDJB 3ZNIA 5KH9A 1V87A 2KREA 2YSJA 4UP0A 1RMDA 5TABA 4YBSA 2YYRA 2BAYA 3N9PA 4QF3A 2CSZA 2CSYA 1WEMA 4A49A 3HCUA 1WGMA 3O36A 2M1RA 3SOWA 2VJEB 4Q6FA 2JMIA 5EYAF 4A0CD 4AVXA 2EGPA 3SHBA 3L1ZB 2YHOA 1N87A 2L75A 3NG2A 2YUCA 2PUYA 5KH3A 5C13A 4R2YA 2VP7A 2XEUA 5D1LB 4YAXA 2AN6A 2YT5A 2VNFA 2HDPA 4WZ0A 2KU3A 2CKLA 2C2VS 4YC9A 5B76A 4CA1A 2UZGA 1WE9A 2DX8A 2H0DA 2LXPC 3N9LA 3PHDA 5H9MA 3KV6A 2MUMA 5J3XA 3EB6A 1WIMA 4ZQLA 1WILA 4YBTA 3RTRB 2VJFA 5D1MB 4AYCB 1WEUA 3O35A 1WENA 2YREA 4GNFA 2MD7B 2K16A 2K1JA 3U5MA 5AITA 4LLBA 2KGGA 2KGIA 1WESA 2FUUA 5TRBA 2YQLA 4TKPB 4P5OB 4V3KC 3V43A 2L43A 3ZVZB 4FJCA 2QJ0A 2KIZA 2VPDA 5FEYA 4CCGX 1JM7A 1WEVA 2ECTA 4YADA 3N9QA 3ZPVE 3SOXA 3KQIA 1U6GB 1Z2QA 5FB1A 4AP4A 2F6NA 2ECVA 4GNDA 4UI9B 3LRQA 2FSAA 4B7YC 4N3WA 3C5KA 4S3OC 5C11A 4WZ3B 4C9ZA 5JG6A 1FP0A 3T6RA 3HCTA 3MHSA 2MT5A 1WEOA 2VJEA 4MVTA 2MA5A 5DINA 1WEEA 3DQVR 4I7CA 2MA6A 4AUQB 3KV5A 3M63A 4X3GA 2M3HA 2E6RA 2CT2A 3N9MA 1JOCA 2JRJA 4ZDTA 5D1KB 3T7LA 1Z6UA 2LN0A 5KH7A 2XB1A 1G25A 2YU4A 4A4CA 2Y1MA 3PURA 1BORA 3ZPV1 1Z60A 3FL2A 4BHWA 3RPGC 2F6JA 3VK6A 4GNEA 3EB5A 5LKTA 2KWNA 1F62A 5H1TA 2ECNA 3O33A 3DPLR 5G0FA 2LQ6A 4I7DA 2LGVA 2JMJA 3C6WA 1E4UA 3QZVA 4YBMA 3ASLA 5B77A 3GL6A 5LKZA 4L58A 2KR4A 2ECWA 1WEPA 2JMDA 5H1UA 4WA6A 2LDRA 4AYCA 2ZETC 3LQJA 1HYIA 2VPEA 5G05B
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2YSM A;  1DVP A;  4BBQ A;  4WZ2 A;  2MNY A;  2L80 A;  5I3L A;  4LAD B;  3IHP A;  1WFK A;  4S3O B;  4GNG A;  4FK5 A;  2M85 A;  2YQM A;  2G43 A;  4I7B A;  4N4F A;  2RSD A;  4R7E A;  2LGL A;  2FUI A;  2F42 A;  3N9N A;  4F52 B;  4MSX A;  2EA6 A;  2YUR A;  2LXH C;  1X4I A;  1WEQ A;  2ECG A;  3HCS A;  2E6S A;  3O34 A;  5B75 A;  1HYJ A;  4O64 A;  4IC3 A;  2LV9 A;  2NAA A;  2VPB A;  1K2F A;  3M62 A;  4R8P K;  2K4D A;  1X4U A;  4FIP A;  5B79 A;  5G04 B;  5TDW A;  2HYE D;  2M6M A;  3U5P A;  1CHC A;  3ZVY A;  4NN2 A;  5TBN A;  1X4J A;  3LQH A;  3KNV A;  2MD8 C;  2G6Q A;  2D8S A;  4A4B A;  2C2L A;  2G45 A;  3O37 A;  3O7A A;  4L7X A;  3L11 A;  4LJN A;  5FB0 A;  5LCW B;  2I50 A;  2Y43 A;  2LGK A;  2YHN A;  2KWJ A;  3I2D A;  2MIQ A;  5DKA A;  3L1X A;  5B8D A;  4UP5 A;  4ZUX U;  3PUQ A;  1IYM A;  4PTB A;  2OXQ C;  4PPE A;  2PNX A;  2KFT A;  1MM2 A;  4IC2 A;  4W4U A;  2KYU A;  5AIU A;  1VD4 A;  4B86 C;  2L0B A;  4GB0 A;  4YAT A;  1MM3 A;  2CKL B;  3U5N A;  2QIZ A;  3U5O A;  3GV4 A;  5H1V A;  2IDA A;  2VPG A;  2H0D B;  4LKA A;  3LQI A;  1VYX A;  5LKU A;  2LRI C;  2YW8 A;  4XI1 A;  1ZBD B;  2K17 A;  4LK9 A;  2L5U A;  3MHH A;  1LDK C;  3M99 A;  2LGG A;  2Y1N A;  5B78 A;  2ECJ A;  2VJF B;  3N9O A;  3HTK C;  2KWO A;  2KWK A;  4QF2 A;  2KE1 A;  5FER A;  2MNZ A;  5LKX A;  2RI7 A;  3ZYQ A;  1T1H A;  4YAB A;  4FO9 A;  4V3L C;  3ZTG A;  1VFY A;  3O70 A;  1JM7 B;  3RPG B;  1XWH A;  3SOU A;  1WEW A;  2QIC A;  1FBV A;  2ECI A;  5TDR A;  2EOD A;  1LDJ B;  3ZNI A;  5KH9 A;  1V87 A;  2KRE A;  2YSJ A;  4UP0 A;  1RMD A;  5TAB A;  4YBS A;  2YYR A;  2BAY A;  3N9P A;  4QF3 A;  2CSZ A;  2CSY A;  1WEM A;  4A49 A;  3HCU A;  1WGM A;  3O36 A;  2M1R A;  3SOW A;  2VJE B;  4Q6F A;  2JMI A;  5EYA F;  4A0C D;  4AVX A;  2EGP A;  3SHB A;  3L1Z B;  2YHO A;  1N87 A;  2L75 A;  3NG2 A;  2YUC A;  2PUY A;  5KH3 A;  5C13 A;  4R2Y A;  2VP7 A;  2XEU A;  5D1L B;  4YAX A;  2AN6 A;  2YT5 A;  2VNF A;  2HDP A;  4WZ0 A;  2KU3 A;  2CKL A;  2C2V S;  4YC9 A;  5B76 A;  4CA1 A;  2UZG A;  1WE9 A;  2DX8 A;  2H0D A;  2LXP C;  3N9L A;  3PHD A;  5H9M A;  3KV6 A;  2MUM A;  5J3X A;  3EB6 A;  1WIM A;  4ZQL A;  1WIL A;  4YBT A;  3RTR B;  2VJF A;  5D1M B;  4AYC B;  1WEU A;  3O35 A;  1WEN A;  2YRE A;  4GNF A;  2MD7 B;  2K16 A;  2K1J A;  3U5M A;  5AIT A;  4LLB A;  2KGG A;  2KGI A;  1WES A;  2FUU A;  5TRB A;  2YQL A;  4TKP B;  4P5O B;  4V3K C;  3V43 A;  2L43 A;  3ZVZ B;  4FJC A;  2QJ0 A;  2KIZ A;  2VPD A;  5FEY A;  4CCG X;  1JM7 A;  1WEV A;  2ECT A;  4YAD A;  3N9Q A;  3ZPV E;  3SOX A;  3KQI A;  1U6G B;  1Z2Q A;  5FB1 A;  4AP4 A;  2F6N A;  2ECV A;  4GND A;  4UI9 B;  3LRQ A;  2FSA A;  4B7Y C;  4N3W A;  3C5K A;  4S3O C;  5C11 A;  4WZ3 B;  4C9Z A;  5JG6 A;  1FP0 A;  3T6R A;  3HCT A;  3MHS A;  2MT5 A;  1WEO A;  2VJE A;  4MVT A;  2MA5 A;  5DIN A;  1WEE A;  3DQV R;  4I7C A;  2MA6 A;  4AUQ B;  3KV5 A;  3M63 A;  4X3G A;  2M3H A;  2E6R A;  2CT2 A;  3N9M A;  1JOC A;  2JRJ A;  4ZDT A;  5D1K B;  3T7L A;  1Z6U A;  2LN0 A;  5KH7 A;  2XB1 A;  1G25 A;  2YU4 A;  4A4C A;  2Y1M A;  3PUR A;  1BOR A;  3ZPV 1;  1Z60 A;  3FL2 A;  4BHW A;  3RPG C;  2F6J A;  3VK6 A;  4GNE A;  3EB5 A;  5LKT A;  2KWN A;  1F62 A;  5H1T A;  2ECN A;  3O33 A;  3DPL R;  5G0F A;  2LQ6 A;  4I7D A;  2LGV A;  2JMJ A;  3C6W A;  1E4U A;  3QZV A;  4YBM A;  3ASL A;  5B77 A;  3GL6 A;  5LKZ A;  4L58 A;  2KR4 A;  2ECW A;  1WEP A;  2JMD A;  5H1U A;  4WA6 A;  2LDR A;  4AYC A;  2ZET C;  3LQJ A;  1HYI A;  2VPE A;  5G05 B; 
#chains in the Genus database with same CATH topology
 2YSM A;  1DVP A;  4BBQ A;  4WZ2 A;  2MNY A;  2L80 A;  5I3L A;  4LAD B;  3IHP A;  1WFK A;  4S3O B;  4GNG A;  2JUN A;  4FK5 A;  2M85 A;  2YQM A;  2G43 A;  4I7B A;  4N4F A;  2RSD A;  4R7E A;  2LGL A;  2FUI A;  2F42 A;  3N9N A;  4F52 B;  4MSX A;  2EA6 A;  2YUR A;  2LXH C;  1X4I A;  1WEQ A;  2ECG A;  2RR4 A;  3HCS A;  2E6S A;  3O34 A;  5B75 A;  1HYJ A;  2FD4 A;  3LVR E;  4O64 A;  4IC3 A;  2LV9 A;  2NAA A;  2VPB A;  3DWD A;  2OWA A;  1K2F A;  3M62 A;  4R8P K;  2KKX A;  2K4D A;  1X4U A;  4FIP A;  5B79 A;  5G04 B;  4O62 A;  5TDW A;  2HYE D;  2M6M A;  3U5P A;  1CHC A;  3ZVY A;  4NN2 A;  5TBN A;  2CRR A;  3M7K A;  1X4J A;  3LQH A;  3KNV A;  2MD8 C;  2G6Q A;  2D8S A;  4A4B A;  2C2L A;  2G45 A;  3H7H A;  3O37 A;  2P57 A;  3O7A A;  4L7X A;  2FFW A;  3L11 A;  4LJN A;  4H9D A;  5FB0 A;  5LCW B;  2I50 A;  2Y43 A;  2LGK A;  2YHN A;  2KWJ A;  3I2D A;  2MIQ A;  5DKA A;  3L1X A;  5B8D A;  4UP5 A;  4ZUX U;  3PUQ A;  1IYM A;  4PTB A;  2OXQ C;  4PPE A;  2PNX A;  2KFT A;  1MM2 A;  4IC2 A;  4W4U A;  2KYU A;  5AIU A;  1VD4 A;  3LJU X;  4B86 C;  2XOZ A;  4Z0R A;  2XP0 A;  2L0B A;  4GB0 A;  4YAT A;  1MM3 A;  3PLW A;  5SVX A;  2CKL B;  3U5N A;  2QIZ A;  3U5O A;  3GV4 A;  5H1V A;  2IDA A;  2VPG A;  3JUE A;  2H0D B;  4LKA A;  2LAU A;  3LQI A;  1VYX A;  5LKU A;  2LRI C;  2YW8 A;  4XI1 A;  1ZBD B;  2K17 A;  4LK9 A;  2L5U A;  3MHH A;  1LDK C;  3M99 A;  2LGG A;  2Y1N A;  5B78 A;  2ECJ A;  2VJF B;  3N9O A;  2DSM A;  3HTK C;  2KWO A;  4F1P A;  2IQJ A;  2KWK A;  4QF2 A;  2KE1 A;  5FER A;  2MNZ A;  2XOY A;  5LKX A;  2RI7 A;  3ZYQ A;  4OGC A;  1T1H A;  4YAB A;  4FO9 A;  3FJU B;  4V3L C;  3ZTG A;  1VFY A;  3O70 A;  1JM7 B;  3DDT A;  3RPG B;  1XWH A;  3SOU A;  1WEW A;  2QIC A;  1FBV A;  2ECI A;  5TDR A;  2EOD A;  1LDJ B;  3ZNI A;  5KH9 A;  1V87 A;  2KRE A;  2YSJ A;  4UP0 A;  2XOC A;  1RMD A;  5TAB A;  4YBS A;  3FAO A;  2YYR A;  2BAY A;  3N9P A;  4QF3 A;  2CSZ A;  2CSY A;  1WEM A;  4A49 A;  3HCU A;  1WGM A;  3O36 A;  5SVI B;  2B0O E;  2M1R A;  3SOW A;  2VJE B;  4Q6F A;  4OGE A;  2JMI A;  5EYA F;  4A0C D;  3LVQ E;  4AVX A;  2EGP A;  3SHB A;  3L1Z B;  2YHO A;  1N87 A;  2L75 A;  3NG2 A;  2YUC A;  2PUY A;  5KH3 A;  5C13 A;  4R2Y A;  2VP7 A;  2XEU A;  5D1L B;  4YAX A;  2AN6 A;  2YT5 A;  2VNF A;  2HDP A;  3KDE C;  4QQ4 A;  4WZ0 A;  2KU3 A;  2CKL A;  2C2V S;  4YC9 A;  5B76 A;  4CA1 A;  2UZG A;  1MBM A;  2YVR A;  1WE9 A;  2DX8 A;  2H0D A;  2LXP C;  2EGM A;  3N9L A;  3PHD A;  5H9M A;  3SUB A;  2CSV A;  3KV6 A;  1DCQ A;  2MUM A;  5J3X A;  3E2D A;  3EB6 A;  2L7P A;  1WIM A;  4ZQL A;  1WIL A;  4YBT A;  3RTR B;  2VJF A;  5D1M B;  4AYC B;  1WEU A;  3O35 A;  1WEN A;  2YRE A;  4GNF A;  2MD7 B;  2K16 A;  2K1J A;  3U5M A;  3O47 A;  5AIT A;  4LLB A;  2KGG A;  5SVY A;  2KGI A;  3Q1D A;  1WES A;  2FUU A;  5TRB A;  2YQL A;  4TKP B;  4P5O B;  4V3K C;  3V43 A;  2L43 A;  3ZVZ B;  4FJC A;  2QJ0 A;  2KIZ A;  2VPD A;  5FEY A;  4CCG X;  1JM7 A;  1WEV A;  2ECT A;  4YAD A;  3N9Q A;  3ZPV E;  3FM8 C;  3SOX A;  3KQI A;  1U6G B;  1Z2Q A;  2DJA A;  5FB1 A;  4AP4 A;  2F6N A;  2ECV A;  4GND A;  4UI9 B;  3LDY A;  2CON A;  3LRQ A;  2FSA A;  4B7Y C;  4Z0O A;  4N3W A;  3FEH A;  3C5K A;  4S3O C;  5C11 A;  5K3Q A;  4WZ3 B;  4C9Z A;  5JG6 A;  1FP0 A;  3T6R A;  3HCT A;  3MHS A;  5SVI A;  2MT5 A;  2JM3 A;  1WEO A;  2VJE A;  4MVT A;  2MA5 A;  3T9K A;  5DIN A;  1WEE A;  3DQV R;  4I7C A;  2MA6 A;  4AUQ B;  3KV5 A;  3M63 A;  4X3G A;  2M3H A;  2E6R A;  2CT2 A;  3N9M A;  1JOC A;  2JRJ A;  4ZDT A;  5D1K B;  2MKE A;  3T7L A;  1Z6U A;  2LN0 A;  5KH7 A;  2XB1 A;  1G25 A;  2YU4 A;  4A4C A;  2Y1M A;  3PUR A;  1BOR A;  3ZPV 1;  1Z60 A;  3FL2 A;  4BHW A;  2E61 A;  3RPG C;  2F6J A;  3MDB C;  3VK6 A;  4GNE A;  3EB5 A;  5LKT A;  2KWN A;  3FAN A;  1F62 A;  5H1T A;  2ECN A;  3O33 A;  3DPL R;  5G0F A;  2LQ6 A;  4I7D A;  2D8U A;  2LGV A;  2JMJ A;  3C6W A;  1E4U A;  2KKY A;  3QZV A;  4YBM A;  2EXU A;  3ASL A;  5B77 A;  3GL6 A;  5LKZ A;  4L58 A;  2KR4 A;  2CRW A;  2ECW A;  1WEP A;  2JMD A;  5H1U A;  4WA6 A;  2LDR A;  2M13 A;  4AYC A;  2ZET C;  3LQJ A;  1HYI A;  2VPE A;  5G05 B; 
#chains in the Genus database with same CATH homology
 2YSM A;  1DVP A;  4BBQ A;  4WZ2 A;  2MNY A;  2L80 A;  5I3L A;  4LAD B;  3IHP A;  1WFK A;  4S3O B;  4GNG A;  4FK5 A;  2M85 A;  2YQM A;  2G43 A;  4I7B A;  4N4F A;  2RSD A;  4R7E A;  2LGL A;  2FUI A;  2F42 A;  3N9N A;  4F52 B;  4MSX A;  2EA6 A;  2YUR A;  2LXH C;  1X4I A;  1WEQ A;  2ECG A;  3HCS A;  2E6S A;  3O34 A;  5B75 A;  1HYJ A;  4O64 A;  4IC3 A;  2LV9 A;  2NAA A;  2VPB A;  1K2F A;  3M62 A;  4R8P K;  2K4D A;  1X4U A;  4FIP A;  5B79 A;  5G04 B;  5TDW A;  2HYE D;  2M6M A;  3U5P A;  1CHC A;  3ZVY A;  4NN2 A;  5TBN A;  1X4J A;  3LQH A;  3KNV A;  2MD8 C;  2G6Q A;  2D8S A;  4A4B A;  2C2L A;  2G45 A;  3O37 A;  3O7A A;  4L7X A;  3L11 A;  4LJN A;  5FB0 A;  5LCW B;  2I50 A;  2Y43 A;  2LGK A;  2YHN A;  2KWJ A;  3I2D A;  2MIQ A;  5DKA A;  3L1X A;  5B8D A;  4UP5 A;  4ZUX U;  3PUQ A;  1IYM A;  4PTB A;  2OXQ C;  4PPE A;  2PNX A;  2KFT A;  1MM2 A;  4IC2 A;  4W4U A;  2KYU A;  5AIU A;  1VD4 A;  4B86 C;  2L0B A;  4GB0 A;  4YAT A;  1MM3 A;  2CKL B;  3U5N A;  2QIZ A;  3U5O A;  3GV4 A;  5H1V A;  2IDA A;  2VPG A;  2H0D B;  4LKA A;  3LQI A;  1VYX A;  5LKU A;  2LRI C;  2YW8 A;  4XI1 A;  1ZBD B;  2K17 A;  4LK9 A;  2L5U A;  3MHH A;  1LDK C;  3M99 A;  2LGG A;  2Y1N A;  5B78 A;  2ECJ A;  2VJF B;  3N9O A;  3HTK C;  2KWO A;  2KWK A;  4QF2 A;  2KE1 A;  5FER A;  2MNZ A;  5LKX A;  2RI7 A;  3ZYQ A;  1T1H A;  4YAB A;  4FO9 A;  4V3L C;  3ZTG A;  1VFY A;  3O70 A;  1JM7 B;  3RPG B;  1XWH A;  3SOU A;  1WEW A;  2QIC A;  1FBV A;  2ECI A;  5TDR A;  2EOD A;  1LDJ B;  3ZNI A;  5KH9 A;  1V87 A;  2KRE A;  2YSJ A;  4UP0 A;  1RMD A;  5TAB A;  4YBS A;  2YYR A;  2BAY A;  3N9P A;  4QF3 A;  2CSZ A;  2CSY A;  1WEM A;  4A49 A;  3HCU A;  1WGM A;  3O36 A;  2M1R A;  3SOW A;  2VJE B;  4Q6F A;  2JMI A;  5EYA F;  4A0C D;  4AVX A;  2EGP A;  3SHB A;  3L1Z B;  2YHO A;  1N87 A;  2L75 A;  3NG2 A;  2YUC A;  2PUY A;  5KH3 A;  5C13 A;  4R2Y A;  2VP7 A;  2XEU A;  5D1L B;  4YAX A;  2AN6 A;  2YT5 A;  2VNF A;  2HDP A;  4WZ0 A;  2KU3 A;  2CKL A;  2C2V S;  4YC9 A;  5B76 A;  4CA1 A;  2UZG A;  1WE9 A;  2DX8 A;  2H0D A;  2LXP C;  3N9L A;  3PHD A;  5H9M A;  3KV6 A;  2MUM A;  5J3X A;  3EB6 A;  1WIM A;  4ZQL A;  1WIL A;  4YBT A;  3RTR B;  2VJF A;  5D1M B;  4AYC B;  1WEU A;  3O35 A;  1WEN A;  2YRE A;  4GNF A;  2MD7 B;  2K16 A;  2K1J A;  3U5M A;  5AIT A;  4LLB A;  2KGG A;  2KGI A;  1WES A;  2FUU A;  5TRB A;  2YQL A;  4TKP B;  4P5O B;  4V3K C;  3V43 A;  2L43 A;  3ZVZ B;  4FJC A;  2QJ0 A;  2KIZ A;  2VPD A;  5FEY A;  4CCG X;  1JM7 A;  1WEV A;  2ECT A;  4YAD A;  3N9Q A;  3ZPV E;  3SOX A;  3KQI A;  1U6G B;  1Z2Q A;  5FB1 A;  4AP4 A;  2F6N A;  2ECV A;  4GND A;  4UI9 B;  3LRQ A;  2FSA A;  4B7Y C;  4N3W A;  3C5K A;  4S3O C;  5C11 A;  4WZ3 B;  4C9Z A;  5JG6 A;  1FP0 A;  3T6R A;  3HCT A;  3MHS A;  2MT5 A;  1WEO A;  2VJE A;  4MVT A;  2MA5 A;  5DIN A;  1WEE A;  3DQV R;  4I7C A;  2MA6 A;  4AUQ B;  3KV5 A;  3M63 A;  4X3G A;  2M3H A;  2E6R A;  2CT2 A;  3N9M A;  1JOC A;  2JRJ A;  4ZDT A;  5D1K B;  3T7L A;  1Z6U A;  2LN0 A;  5KH7 A;  2XB1 A;  1G25 A;  2YU4 A;  4A4C A;  2Y1M A;  3PUR A;  1BOR A;  3ZPV 1;  1Z60 A;  3FL2 A;  4BHW A;  3RPG C;  2F6J A;  3VK6 A;  4GNE A;  3EB5 A;  5LKT A;  2KWN A;  1F62 A;  5H1T A;  2ECN A;  3O33 A;  3DPL R;  5G0F A;  2LQ6 A;  4I7D A;  2LGV A;  2JMJ A;  3C6W A;  1E4U A;  3QZV A;  4YBM A;  3ASL A;  5B77 A;  3GL6 A;  5LKZ A;  4L58 A;  2KR4 A;  2ECW A;  1WEP A;  2JMD A;  5H1U A;  4WA6 A;  2LDR A;  4AYC A;  2ZET C;  3LQJ A;  1HYI A;  2VPE A;  5G05 B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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