3M63 | Genus

Total Genus 370

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	370
sequence length	961
structure length	953
Chain Sequence	SPEFRSMTAIEDILQITTDPSDTRGYSLLKSEEVPQGSTLGVDFIDTLLLYQLTENEKLDKPFEYLNDCFRRNQQQKRITKNKPNAESLHSTFQEIDRLVIGYGVVALQIENFCMNGAFINYITGIVSNVNSYTDFLSQIIQRAILEGTALDLLNAVFPTLLEYCNKHVSHFDLNESVIYNNVLTIFELFVTFKPIAEIFTKIDGFFADYSCKPQDFERKTILGPILSLSPIEAAVAIRNYGDNLLRSKQQTAMIHESLQAEHKVVIDRLFFIVDKLVRGSLNSRTDMISYFAHIANKNHLRRADHPPFKELSSNGFMSNITLLLVRFSQPFLDISYKKIDKIDANYFNNPSLFIDLSGETRLNSDFKEADAFYDKNRKTADSKPNFISDCFFLTLTYLHYGLGGTLSFEEKMGSEIKALKEEIEKVKKIAANHDVFARFITAQLSKMEKALKTTESLRFALQGFFAHRSLQLEVFDFICGASTFLIRVVDPEHEFPFKQIKLPLIPDQIVDNADFLRAHAPVPFKYYPEFVVEGPVNYSLYISKYQTSPIFRNPRLGSFVEFTTMVLRCPELVSNPHLKGKLVQLLSVGAMPLTDNSPGFMMDIFEHDELVNKNLLYALLDFYVIVEKTGSQFYDKFNSRYSISIILEELYYKIPSYKNQLIWQSQNNADFFVRFVARMLNDLTFLLDEGLSNLAEVHNIQNELDNRARGAPREEEDKELQTRLASASRQAKSSCGLADKSMKLFEIYSKDIPAAFVTPEIVYRLASMLNYNLESLVGPKCGELKVKDPQSYSFNPKDLLKALTTVYINLSEQSEFISAVAKDERSFNRNLFVRAVDILGRKTGLASPEFIEKLLNFANKAEEQRKADEEEDLEYGDVPDEFLDPLMYTIMKDPVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDVTPNEELRQKILCFKKQKKEEA

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

loadScript /static/js/j2s/core/package.js

loadScript /static/js/j2s/core/corejmol.z.js

loadScript /static/js/j2s/core/corescript.z.js

JSmol exec jmolApplet0 start applet null

Jmol JavaScript applet jmolApplet0__850650431466046__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__850650431466046__)

vwrOptions:

{ "name":"jmolApplet0","applet":true,"documentBase":"https://genus.fuw.edu.pl/view/3M63/A/","platform":"J.awtjs2d.Platform","fullName":"jmolApplet0__850650431466046__","codePath":"https:/static/js/j2s/","display":"jmolApplet0_canvas2d","signedApplet":"true","appletReadyCallback":"Jmol._readyCallback","statusListener":"[J.appletjs.Jmol object]","syncId":"850650431466046","bgcolor":"white" }

setting document base to "https://genus.fuw.edu.pl/view/3M63/A/"

Jmol Version: 14.29.13 2018-04-17 17:17

java.vendor: Java2Script (HTML5)

java.version: 2018-01-28 23:38:52 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

Access: ALL

memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:jmolApplet0 (signed)

Jmol getValue emulate null

defaults = "Jmol"

Jmol getValue boxbgcolor null

Jmol getValue bgcolor white

backgroundColor = "white"

Jmol getValue ANIMFRAMECallback null

Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

callback set for APPLETREADYCallback Jmol._readyCallback APPLETREADY

Jmol getValue ATOMMOVEDCallback null

Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

Jmol getValue MINIMIZATIONCallback null

Jmol getValue SERVICECallback null

Jmol getValue PICKCallback null

Jmol getValue RESIZECallback null

Jmol getValue SCRIPTCallback null

Jmol getValue SYNCCallback null

Jmol getValue STRUCTUREMODIFIEDCallback null

Jmol getValue doTranslate null

language=en_US

Jmol getValue popupMenu null

Jmol getValue script null

Jmol getValue loadInline null

Jmol getValue load null

Jmol applet jmolApplet0__850650431466046__ ready

script 1 started

platformSpeed = 8

Viewer cachePut cache://localLOAD_/file/5cffb90da42de1b05d61f6f4/pdb.gz

Viewer cachePut https://genus.fuw.edu.pl/file/5cffb90da42de1b05d61f6f4/pdb.gz

FileManager.getAtomSetCollectionFromFile(/file/5cffb90da42de1b05d61f6f4/pdb.gz)

loadScript /static/js/j2s/core/corezip.z.js

The Resolver thinks Pdb

loadScript /static/js/j2s/core/corebio.z.js

Time for openFile(/file/5cffb90da42de1b05d61f6f4/pdb.gz): 389 ms

reading 953 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Jmol

953 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 49 ms

Adding embedded #jmolscript: select ({0:952});backbone only;select *;

platformSpeed = 8

cartoonsFancy = true

sheetSmoothing = 1.0

traceAlpha = true

loadScript /static/js/j2s/core/corescriptcmd.z.js

specularPower = 9

ambientPercent = 20

antialiasDisplay = true

Script completed

Jmol script terminated

loadScript /static/js/j2s/J/g3d/HermiteRenderer.js

loadScript /static/js/j2s/J/renderbio/BioMeshRenderer.js

loadScript /static/js/j2s/J/render/MeshRenderer.js

loadScript /static/js/j2s/J/shape/Mesh.js

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

molecule tags	Ligase/protein binding
source organism	Saccharomyces cerevisiae
publication title	The yeast E4 ubiquitin ligase Ufd2 interacts with the ubiquitin-like domains of Rad23 and Dsk2 via a novel and distinct ubiquitin-like binding domain. pubmed doi rcsb
molecule keywords	Ubiquitin conjugation factor E4
total genus	370
structure length	953
sequence length	961
ec nomenclature	ec 2.3.2.27: RING-type E3 ubiquitin transferase.
pdb deposition date	2010-03-15

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF04564	U-box	U-box domain
A	PF10408	Ufd2P_core	Ubiquitin elongating factor core

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.30.40.10	Alpha Beta	2-Layer Sandwich	Herpes Virus-1	Zinc/RING finger domain, C3HC4 (zinc finger)	3m63A02

2MUMA 4IC2A 1XWHA 1WFKA 3C6WA 4YBMA 2HYED 1X4UA 3M63A 4AYCA 2YQMA 2FUUA 2LGLA 3EB5A 2LV9A 4WZ3B 4A49A 2L80A 2KGGA 2YU4A 3MHHA 2KU3A 5AITA 2L75A 2PUYA 2DX8A 3O36A 3O34A 5H9MA 4B86C 2BAYA 3U5PA 1JOCA 1K2FA 3U5NA 2QIZA 5FB1A 2ECIA 5H1TA 2YW8A 2QJ0A 2VPEA 5FERA 2ECWA 2JRJA 4MSXA 4CCGX 3FL2A 1VD4A 2KYUA 3ZPVE 4A4CA 1Z2QA 4C9ZA 2JMDA 2KWOA 5FEYA 3HCSA 2L0BA 2FUIA 2VPBA 5LKUA 2M85A 2XB1A 1WEWA 3KV5A 3MHSA 3PURA 4PTBA 4AUQB 1IYMA 1T1HA 4GNFA 3O70A 5TBNA 1ZBDB 4A0CD 3U5MA 2HDPA 4FK5A 1RMDA 2M6MA 3N9LA 4LJNA 4LLBA 5B8DA 5H1UA 1WEPA 5B75A 5KH9A 2I50A 5LCWB 3KQIA 4A4BA 1WENA 2NAAA 4UP0A 4S3OB 4O64A 3U5OA 1HYJA 4CA1A 1WEMA 3T6RA 1LDKC 1BORA 4PPEA 2ECGA 1F62A 1MM2A 5G04B 4S3OC 2Y1NA 2F6NA 1WIMA 4R2YA 5TDRA 4GB0A 2LDRA 3SOUA 4V3LC 2JMJA 5C11A 4FJCA 4YATA 1WEQA 4YAXA 1VFYA 4YBSA 4I7BA 3DQVR 4P5OB 2EA6A 2YSJA 2YHNA 5D1KB 1VYXA 5LKTA 2F6JA 3GL6A 2PNXA 1FBVA 2CSYA 3O37A 2MD8C 1WEOA 2VPGA 4TKPB 4LK9A 2ECVA 4FIPA 3ZTGA 5AIUA 2UZGA 5B76A 3ZPV1 4MVTA 4FO9A 4W4UA 4ZDTA 4AYCB 2ECNA 4XI1A 3ZVYA 2L5UA 3N9OA 3L1XA 1U6GB 1Z60A 4I7DA 2EGPA 1HYIA 4WZ2A 1N87A 5G0FA 2CSZA 2KWNA 5TABA 2VNFA 4QF2A 4N4FA 3ZYQA 4B7YC 2YUCA 4UP5A 5TRBA 4F52B 2M1RA 2XEUA 2E6RA 3DPLR 2IDAA 2F42A 2KIZA 2LGGA 2KGIA 5LKXA 2EODA 4GNEA 2KR4A 4IC3A 2QICA 3LQJA 3RPGB 5LKZA 5JG6A 4NN2A 3EB6A 2LXHC 2ECTA 2CKLA 5KH3A 2KWKA 3V43A 2C2LA 2K17A 5B77A 5KH7A 2KWJA 4YABA 3M62A 2KREA 3RPGC 2H0DA 1WGMA 4YC9A 1G25A 5DINA 5EYAF 2G45A 2KE1A 2MA5A 2C2VS 3PUQA 3SOXA 3N9NA 2K16A 2AN6A 1JM7A 3QZVA 2LXPC 2VPDA 2E6SA 5D1LB 1WEEA 2JMIA 5FB0A 4V3KC 2L43A 3IHPA 2LN0A 3N9QA 4YADA 4R8PK 1DVPA 2VJFA 2VP7A 4R7EA 3HTKC 2M3HA 4L58A 1FP0A 2MNZA 4I7CA 5D1MB 3L1ZB 1JM7B 2LGKA 4X3GA 4BHWA 2K1JA 3N9MA 2ZETC 1WESA 4WZ0A 2CT2A 2MNYA 5H1VA 2LGVA 3N9PA 4WA6A 4Q6FA 3LQIA 2K4DA 3HCUA 2Y1MA 2D8SA 2VJFB 5J3XA 4N3WA 3VK6A 2ECJA 2KFTA 2LQ6A 3O7AA 3KNVA 2Y43A 4AVXA 2YHOA 3RTRB 3ZVZB 5C13A 1X4JA 4QF3A 2VJEA 1V87A 1WEUA 3M99A 1LDJB 4AP4A 3ASLA 2MIQA 3LRQA 2YQLA 3SOWA 1WILA 1WEVA 4ZQLA 3O33A 2YYRA 1WE9A 4YBTA 3HCTA 5B79A 1X4IA 2YURA 4BBQA 2LRIC 2YT5A 3C5KA 2RSDA 4GNDA 1CHCA 2YSMA 5I3LA 3NG2A 3GV4A 3I2DA 4L7XA 2VJEB 1MM3A 5G05B 3SHBA 4LKAA 2MT5A 3PHDA 3L11A 4UI9B 1Z6UA 4LADB 2FSAA 2YREA 5TDWA 3T7LA 3LQHA 2MA6A 4GNGA 2MD7B 2RI7A 4ZUXU 5B78A 2CKLB 2G6QA 3O35A 2G43A 5DKAA 3ZNIA 3KV6A 2H0DB 2OXQC 1E4UA
chains in the Genus database with same CATH superfamily

2MUMA 4IC2A 1XWHA 2RR4A 1WFKA 3C6WA 2XOYA 4YBMA 2HYED 2FD4A 1X4UA 3M63A 4AYCA 2YQMA 2FUUA 2LGLA 3EB5A 2LV9A 4WZ3B 4A49A 2L80A 2EGMA 2KGGA 2YU4A 3MHHA 2KU3A 5AITA 2L75A 2PUYA 2DX8A 3O36A 3O34A 5H9MA 4B86C 2BAYA 3U5PA 1JOCA 1K2FA 3U5NA 2QIZA 5FB1A 2ECIA 5H1TA 2YW8A 2QJ0A 2VPEA 4QQ4A 5FERA 2ECWA 2JRJA 4MSXA 4CCGX 3H7HA 3FL2A 1VD4A 2KYUA 3ZPVE 4A4CA 1Z2QA 2CRWA 4C9ZA 2JMDA 2KWOA 5FEYA 3HCSA 3LDYA 2L0BA 2FUIA 2VPBA 5LKUA 2M85A 2XB1A 1WEWA 3KV5A 3MHSA 3PURA 4PTBA 4AUQB 1IYMA 1T1HA 4GNFA 3O70A 5TBNA 1ZBDB 4A0CD 3U5MA 2HDPA 2KKYA 4FK5A 1RMDA 2M6MA 3N9LA 3PLWA 2CSVA 4LJNA 4LLBA 5B8DA 5H1UA 1WEPA 5B75A 5KH9A 2I50A 5LCWB 3KQIA 4A4BA 1WENA 2NAAA 4UP0A 4S3OB 4O64A 3U5OA 1MBMA 1HYJA 4CA1A 1WEMA 3T9KA 3T6RA 1LDKC 1BORA 2XOCA 4PPEA 2ECGA 1F62A 1MM2A 2P57A 5SVYA 5G04B 4S3OC 2DJAA 2Y1NA 2F6NA 1WIMA 4R2YA 5TDRA 4GB0A 2LDRA 3SOUA 4V3LC 2JMJA 3DDTA 5C11A 4FJCA 2EXUA 1WEQA 4YATA 4YAXA 1VFYA 4YBSA 4I7BA 3DQVR 4P5OB 4Z0RA 2EA6A 2YSJA 5SVXA 2YHNA 3MDBC 5D1KB 1VYXA 5LKTA 2F6JA 3GL6A 3Q1DA 2PNXA 1FBVA 2CSYA 3O37A 2MD8C 1WEOA 3LVQE 2VPGA 4TKPB 4LK9A 2ECVA 4FIPA 3ZTGA 5AIUA 2UZGA 5B76A 3ZPV1 4MVTA 4FO9A 4OGCA 4W4UA 4ZDTA 4OGEA 4AYCB 2ECNA 4XI1A 3ZVYA 2L5UA 3N9OA 3L1XA 1U6GB 1Z60A 4I7DA 2EGPA 1HYIA 2JUNA 4WZ2A 1N87A 5G0FA 2CSZA 2KWNA 5TABA 2VNFA 4QF2A 4N4FA 3ZYQA 4B7YC 2YUCA 4UP5A 3E2DA 5TRBA 4F52B 2M1RA 2XEUA 2E6RA 3DWDA 3DPLR 2IDAA 2F42A 2KIZA 2LGGA 2KGIA 5LKXA 2EODA 3FJUB 5SVIA 4GNEA 2KR4A 4IC3A 2QICA 3LQJA 3RPGB 5LKZA 5JG6A 3LJUX 4NN2A 3EB6A 2LXHC 2ECTA 2CKLA 5KH3A 5K3QA 2KWKA 3V43A 2C2LA 2K17A 5B77A 5KH7A 2KWJA 4H9DA 4Z0OA 4YABA 3M62A 2KREA 3RPGC 2H0DA 1WGMA 4YC9A 1G25A 5DINA 5EYAF 2G45A 2D8UA 2KE1A 2MA5A 2M13A 2KKXA 2C2VS 3PUQA 3SOXA 3N9NA 2K16A 2AN6A 1JM7A 3QZVA 2LXPC 2VPDA 2E6SA 2MKEA 5D1LB 3FM8C 1WEEA 2JMIA 5FB0A 4V3KC 2L43A 3FAOA 3IHPA 2E61A 2CRRA 2FFWA 2LN0A 3N9QA 4YADA 3O47A 4R8PK 2OWAA 1DVPA 2VJFA 2VP7A 4R7EA 3HTKC 2LAUA 2M3HA 4L58A 1FP0A 2XOZA 2MNZA 3JUEA 4I7CA 5D1MB 3L1ZB 1JM7B 2LGKA 4X3GA 2CONA 4BHWA 2K1JA 3FANA 3N9MA 2ZETC 1WESA 3KDEC 4WZ0A 2CT2A 2MNYA 2LGVA 3N9PA 5H1VA 4WA6A 4Q6FA 3LQIA 2K4DA 3HCUA 2Y1MA 4O62A 2D8SA 2VJFB 5J3XA 4N3WA 3VK6A 2ECJA 2L7PA 2KFTA 2LQ6A 3O7AA 3KNVA 2Y43A 4AVXA 2YHOA 3RTRB 3ZVZB 5C13A 2XP0A 1X4JA 3FEHA 4QF3A 2VJEA 1V87A 1WEUA 3M99A 2IQJA 1LDJB 4AP4A 3ASLA 2DSMA 2MIQA 3LRQA 2YQLA 3SOWA 1WILA 1WEVA 4ZQLA 3O33A 2YYRA 1WE9A 4YBTA 3HCTA 5B79A 1X4IA 2B0OE 3SUBA 2YURA 4BBQA 2LRIC 2YT5A 3C5KA 2RSDA 4GNDA 1CHCA 2YSMA 5I3LA 3M7KA 3NG2A 2YVRA 3GV4A 3I2DA 4L7XA 2VJEB 1MM3A 5G05B 3SHBA 1DCQA 4LKAA 2MT5A 3PHDA 3L11A 4UI9B 1Z6UA 5SVIB 4LADB 2FSAA 2YREA 5TDWA 3T7LA 3LQHA 2MA6A 4GNGA 2MD7B 4F1PA 2JM3A 2RI7A 4ZUXU 5B78A 2CKLB 3LVRE 2G6QA 3O35A 2G43A 5DKAA 3ZNIA 3KV6A 2H0DB 2OXQC 1E4UA
chains in the Genus database with same CATH topology

#chains in the Genus database with same CATH superfamily
 2MUM A;  4IC2 A;  1XWH A;  1WFK A;  3C6W A;  4YBM A;  2HYE D;  1X4U A;  3M63 A;  4AYC A;  2YQM A;  2FUU A;  2LGL A;  3EB5 A;  2LV9 A;  4WZ3 B;  4A49 A;  2L80 A;  2KGG A;  2YU4 A;  3MHH A;  2KU3 A;  5AIT A;  2L75 A;  2PUY A;  2DX8 A;  3O36 A;  3O34 A;  5H9M A;  4B86 C;  2BAY A;  3U5P A;  1JOC A;  1K2F A;  3U5N A;  2QIZ A;  5FB1 A;  2ECI A;  5H1T A;  2YW8 A;  2QJ0 A;  2VPE A;  5FER A;  2ECW A;  2JRJ A;  4MSX A;  4CCG X;  3FL2 A;  1VD4 A;  2KYU A;  3ZPV E;  4A4C A;  1Z2Q A;  4C9Z A;  2JMD A;  2KWO A;  5FEY A;  3HCS A;  2L0B A;  2FUI A;  2VPB A;  5LKU A;  2M85 A;  2XB1 A;  1WEW A;  3KV5 A;  3MHS A;  3PUR A;  4PTB A;  4AUQ B;  1IYM A;  1T1H A;  4GNF A;  3O70 A;  5TBN A;  1ZBD B;  4A0C D;  3U5M A;  2HDP A;  4FK5 A;  1RMD A;  2M6M A;  3N9L A;  4LJN A;  4LLB A;  5B8D A;  5H1U A;  1WEP A;  5B75 A;  5KH9 A;  2I50 A;  5LCW B;  3KQI A;  4A4B A;  1WEN A;  2NAA A;  4UP0 A;  4S3O B;  4O64 A;  3U5O A;  1HYJ A;  4CA1 A;  1WEM A;  3T6R A;  1LDK C;  1BOR A;  4PPE A;  2ECG A;  1F62 A;  1MM2 A;  5G04 B;  4S3O C;  2Y1N A;  2F6N A;  1WIM A;  4R2Y A;  5TDR A;  4GB0 A;  2LDR A;  3SOU A;  4V3L C;  2JMJ A;  5C11 A;  4FJC A;  4YAT A;  1WEQ A;  4YAX A;  1VFY A;  4YBS A;  4I7B A;  3DQV R;  4P5O B;  2EA6 A;  2YSJ A;  2YHN A;  5D1K B;  1VYX A;  5LKT A;  2F6J A;  3GL6 A;  2PNX A;  1FBV A;  2CSY A;  3O37 A;  2MD8 C;  1WEO A;  2VPG A;  4TKP B;  4LK9 A;  2ECV A;  4FIP A;  3ZTG A;  5AIU A;  2UZG A;  5B76 A;  3ZPV 1;  4MVT A;  4FO9 A;  4W4U A;  4ZDT A;  4AYC B;  2ECN A;  4XI1 A;  3ZVY A;  2L5U A;  3N9O A;  3L1X A;  1U6G B;  1Z60 A;  4I7D A;  2EGP A;  1HYI A;  4WZ2 A;  1N87 A;  5G0F A;  2CSZ A;  2KWN A;  5TAB A;  2VNF A;  4QF2 A;  4N4F A;  3ZYQ A;  4B7Y C;  2YUC A;  4UP5 A;  5TRB A;  4F52 B;  2M1R A;  2XEU A;  2E6R A;  3DPL R;  2IDA A;  2F42 A;  2KIZ A;  2LGG A;  2KGI A;  5LKX A;  2EOD A;  4GNE A;  2KR4 A;  4IC3 A;  2QIC A;  3LQJ A;  3RPG B;  5LKZ A;  5JG6 A;  4NN2 A;  3EB6 A;  2LXH C;  2ECT A;  2CKL A;  5KH3 A;  2KWK A;  3V43 A;  2C2L A;  2K17 A;  5B77 A;  5KH7 A;  2KWJ A;  4YAB A;  3M62 A;  2KRE A;  3RPG C;  2H0D A;  1WGM A;  4YC9 A;  1G25 A;  5DIN A;  5EYA F;  2G45 A;  2KE1 A;  2MA5 A;  2C2V S;  3PUQ A;  3SOX A;  3N9N A;  2K16 A;  2AN6 A;  1JM7 A;  3QZV A;  2LXP C;  2VPD A;  2E6S A;  5D1L B;  1WEE A;  2JMI A;  5FB0 A;  4V3K C;  2L43 A;  3IHP A;  2LN0 A;  3N9Q A;  4YAD A;  4R8P K;  1DVP A;  2VJF A;  2VP7 A;  4R7E A;  3HTK C;  2M3H A;  4L58 A;  1FP0 A;  2MNZ A;  4I7C A;  5D1M B;  3L1Z B;  1JM7 B;  2LGK A;  4X3G A;  4BHW A;  2K1J A;  3N9M A;  2ZET C;  1WES A;  4WZ0 A;  2CT2 A;  2MNY A;  5H1V A;  2LGV A;  3N9P A;  4WA6 A;  4Q6F A;  3LQI A;  2K4D A;  3HCU A;  2Y1M A;  2D8S A;  2VJF B;  5J3X A;  4N3W A;  3VK6 A;  2ECJ A;  2KFT A;  2LQ6 A;  3O7A A;  3KNV A;  2Y43 A;  4AVX A;  2YHO A;  3RTR B;  3ZVZ B;  5C13 A;  1X4J A;  4QF3 A;  2VJE A;  1V87 A;  1WEU A;  3M99 A;  1LDJ B;  4AP4 A;  3ASL A;  2MIQ A;  3LRQ A;  2YQL A;  3SOW A;  1WIL A;  1WEV A;  4ZQL A;  3O33 A;  2YYR A;  1WE9 A;  4YBT A;  3HCT A;  5B79 A;  1X4I A;  2YUR A;  4BBQ A;  2LRI C;  2YT5 A;  3C5K A;  2RSD A;  4GND A;  1CHC A;  2YSM A;  5I3L A;  3NG2 A;  3GV4 A;  3I2D A;  4L7X A;  2VJE B;  1MM3 A;  5G05 B;  3SHB A;  4LKA A;  2MT5 A;  3PHD A;  3L11 A;  4UI9 B;  1Z6U A;  4LAD B;  2FSA A;  2YRE A;  5TDW A;  3T7L A;  3LQH A;  2MA6 A;  4GNG A;  2MD7 B;  2RI7 A;  4ZUX U;  5B78 A;  2CKL B;  2G6Q A;  3O35 A;  2G43 A;  5DKA A;  3ZNI A;  3KV6 A;  2H0D B;  2OXQ C;  1E4U A; 
#chains in the Genus database with same CATH topology
 2MUM A;  4IC2 A;  1XWH A;  2RR4 A;  1WFK A;  3C6W A;  2XOY A;  4YBM A;  2HYE D;  2FD4 A;  1X4U A;  3M63 A;  4AYC A;  2YQM A;  2FUU A;  2LGL A;  3EB5 A;  2LV9 A;  4WZ3 B;  4A49 A;  2L80 A;  2EGM A;  2KGG A;  2YU4 A;  3MHH A;  2KU3 A;  5AIT A;  2L75 A;  2PUY A;  2DX8 A;  3O36 A;  3O34 A;  5H9M A;  4B86 C;  2BAY A;  3U5P A;  1JOC A;  1K2F A;  3U5N A;  2QIZ A;  5FB1 A;  2ECI A;  5H1T A;  2YW8 A;  2QJ0 A;  2VPE A;  4QQ4 A;  5FER A;  2ECW A;  2JRJ A;  4MSX A;  4CCG X;  3H7H A;  3FL2 A;  1VD4 A;  2KYU A;  3ZPV E;  4A4C A;  1Z2Q A;  2CRW A;  4C9Z A;  2JMD A;  2KWO A;  5FEY A;  3HCS A;  3LDY A;  2L0B A;  2FUI A;  2VPB A;  5LKU A;  2M85 A;  2XB1 A;  1WEW A;  3KV5 A;  3MHS A;  3PUR A;  4PTB A;  4AUQ B;  1IYM A;  1T1H A;  4GNF A;  3O70 A;  5TBN A;  1ZBD B;  4A0C D;  3U5M A;  2HDP A;  2KKY A;  4FK5 A;  1RMD A;  2M6M A;  3N9L A;  3PLW A;  2CSV A;  4LJN A;  4LLB A;  5B8D A;  5H1U A;  1WEP A;  5B75 A;  5KH9 A;  2I50 A;  5LCW B;  3KQI A;  4A4B A;  1WEN A;  2NAA A;  4UP0 A;  4S3O B;  4O64 A;  3U5O A;  1MBM A;  1HYJ A;  4CA1 A;  1WEM A;  3T9K A;  3T6R A;  1LDK C;  1BOR A;  2XOC A;  4PPE A;  2ECG A;  1F62 A;  1MM2 A;  2P57 A;  5SVY A;  5G04 B;  4S3O C;  2DJA A;  2Y1N A;  2F6N A;  1WIM A;  4R2Y A;  5TDR A;  4GB0 A;  2LDR A;  3SOU A;  4V3L C;  2JMJ A;  3DDT A;  5C11 A;  4FJC A;  2EXU A;  1WEQ A;  4YAT A;  4YAX A;  1VFY A;  4YBS A;  4I7B A;  3DQV R;  4P5O B;  4Z0R A;  2EA6 A;  2YSJ A;  5SVX A;  2YHN A;  3MDB C;  5D1K B;  1VYX A;  5LKT A;  2F6J A;  3GL6 A;  3Q1D A;  2PNX A;  1FBV A;  2CSY A;  3O37 A;  2MD8 C;  1WEO A;  3LVQ E;  2VPG A;  4TKP B;  4LK9 A;  2ECV A;  4FIP A;  3ZTG A;  5AIU A;  2UZG A;  5B76 A;  3ZPV 1;  4MVT A;  4FO9 A;  4OGC A;  4W4U A;  4ZDT A;  4OGE A;  4AYC B;  2ECN A;  4XI1 A;  3ZVY A;  2L5U A;  3N9O A;  3L1X A;  1U6G B;  1Z60 A;  4I7D A;  2EGP A;  1HYI A;  2JUN A;  4WZ2 A;  1N87 A;  5G0F A;  2CSZ A;  2KWN A;  5TAB A;  2VNF A;  4QF2 A;  4N4F A;  3ZYQ A;  4B7Y C;  2YUC A;  4UP5 A;  3E2D A;  5TRB A;  4F52 B;  2M1R A;  2XEU A;  2E6R A;  3DWD A;  3DPL R;  2IDA A;  2F42 A;  2KIZ A;  2LGG A;  2KGI A;  5LKX A;  2EOD A;  3FJU B;  5SVI A;  4GNE A;  2KR4 A;  4IC3 A;  2QIC A;  3LQJ A;  3RPG B;  5LKZ A;  5JG6 A;  3LJU X;  4NN2 A;  3EB6 A;  2LXH C;  2ECT A;  2CKL A;  5KH3 A;  5K3Q A;  2KWK A;  3V43 A;  2C2L A;  2K17 A;  5B77 A;  5KH7 A;  2KWJ A;  4H9D A;  4Z0O A;  4YAB A;  3M62 A;  2KRE A;  3RPG C;  2H0D A;  1WGM A;  4YC9 A;  1G25 A;  5DIN A;  5EYA F;  2G45 A;  2D8U A;  2KE1 A;  2MA5 A;  2M13 A;  2KKX A;  2C2V S;  3PUQ A;  3SOX A;  3N9N A;  2K16 A;  2AN6 A;  1JM7 A;  3QZV A;  2LXP C;  2VPD A;  2E6S A;  2MKE A;  5D1L B;  3FM8 C;  1WEE A;  2JMI A;  5FB0 A;  4V3K C;  2L43 A;  3FAO A;  3IHP A;  2E61 A;  2CRR A;  2FFW A;  2LN0 A;  3N9Q A;  4YAD A;  3O47 A;  4R8P K;  2OWA A;  1DVP A;  2VJF A;  2VP7 A;  4R7E A;  3HTK C;  2LAU A;  2M3H A;  4L58 A;  1FP0 A;  2XOZ A;  2MNZ A;  3JUE A;  4I7C A;  5D1M B;  3L1Z B;  1JM7 B;  2LGK A;  4X3G A;  2CON A;  4BHW A;  2K1J A;  3FAN A;  3N9M A;  2ZET C;  1WES A;  3KDE C;  4WZ0 A;  2CT2 A;  2MNY A;  2LGV A;  3N9P A;  5H1V A;  4WA6 A;  4Q6F A;  3LQI A;  2K4D A;  3HCU A;  2Y1M A;  4O62 A;  2D8S A;  2VJF B;  5J3X A;  4N3W A;  3VK6 A;  2ECJ A;  2L7P A;  2KFT A;  2LQ6 A;  3O7A A;  3KNV A;  2Y43 A;  4AVX A;  2YHO A;  3RTR B;  3ZVZ B;  5C13 A;  2XP0 A;  1X4J A;  3FEH A;  4QF3 A;  2VJE A;  1V87 A;  1WEU A;  3M99 A;  2IQJ A;  1LDJ B;  4AP4 A;  3ASL A;  2DSM A;  2MIQ A;  3LRQ A;  2YQL A;  3SOW A;  1WIL A;  1WEV A;  4ZQL A;  3O33 A;  2YYR A;  1WE9 A;  4YBT A;  3HCT A;  5B79 A;  1X4I A;  2B0O E;  3SUB A;  2YUR A;  4BBQ A;  2LRI C;  2YT5 A;  3C5K A;  2RSD A;  4GND A;  1CHC A;  2YSM A;  5I3L A;  3M7K A;  3NG2 A;  2YVR A;  3GV4 A;  3I2D A;  4L7X A;  2VJE B;  1MM3 A;  5G05 B;  3SHB A;  1DCQ A;  4LKA A;  2MT5 A;  3PHD A;  3L11 A;  4UI9 B;  1Z6U A;  5SVI B;  4LAD B;  2FSA A;  2YRE A;  5TDW A;  3T7L A;  3LQH A;  2MA6 A;  4GNG A;  2MD7 B;  4F1P A;  2JM3 A;  2RI7 A;  4ZUX U;  5B78 A;  2CKL B;  3LVR E;  2G6Q A;  3O35 A;  2G43 A;  5DKA A;  3ZNI A;  3KV6 A;  2H0D B;  2OXQ C;  1E4U A; 
#chains in the Genus database with same CATH homology
 2MUM A;  4IC2 A;  1XWH A;  1WFK A;  3C6W A;  4YBM A;  2HYE D;  1X4U A;  3M63 A;  4AYC A;  2YQM A;  2FUU A;  2LGL A;  3EB5 A;  2LV9 A;  4WZ3 B;  4A49 A;  2L80 A;  2KGG A;  2YU4 A;  3MHH A;  2KU3 A;  5AIT A;  2L75 A;  2PUY A;  2DX8 A;  3O36 A;  3O34 A;  5H9M A;  4B86 C;  2BAY A;  3U5P A;  1JOC A;  1K2F A;  3U5N A;  2QIZ A;  5FB1 A;  2ECI A;  5H1T A;  2YW8 A;  2QJ0 A;  2VPE A;  5FER A;  2ECW A;  2JRJ A;  4MSX A;  4CCG X;  3FL2 A;  1VD4 A;  2KYU A;  3ZPV E;  4A4C A;  1Z2Q A;  4C9Z A;  2JMD A;  2KWO A;  5FEY A;  3HCS A;  2L0B A;  2FUI A;  2VPB A;  5LKU A;  2M85 A;  2XB1 A;  1WEW A;  3KV5 A;  3MHS A;  3PUR A;  4PTB A;  4AUQ B;  1IYM A;  1T1H A;  4GNF A;  3O70 A;  5TBN A;  1ZBD B;  4A0C D;  3U5M A;  2HDP A;  4FK5 A;  1RMD A;  2M6M A;  3N9L A;  4LJN A;  4LLB A;  5B8D A;  5H1U A;  1WEP A;  5B75 A;  5KH9 A;  2I50 A;  5LCW B;  3KQI A;  4A4B A;  1WEN A;  2NAA A;  4UP0 A;  4S3O B;  4O64 A;  3U5O A;  1HYJ A;  4CA1 A;  1WEM A;  3T6R A;  1LDK C;  1BOR A;  4PPE A;  2ECG A;  1F62 A;  1MM2 A;  5G04 B;  4S3O C;  2Y1N A;  2F6N A;  1WIM A;  4R2Y A;  5TDR A;  4GB0 A;  2LDR A;  3SOU A;  4V3L C;  2JMJ A;  5C11 A;  4FJC A;  4YAT A;  1WEQ A;  4YAX A;  1VFY A;  4YBS A;  4I7B A;  3DQV R;  4P5O B;  2EA6 A;  2YSJ A;  2YHN A;  5D1K B;  1VYX A;  5LKT A;  2F6J A;  3GL6 A;  2PNX A;  1FBV A;  2CSY A;  3O37 A;  2MD8 C;  1WEO A;  2VPG A;  4TKP B;  4LK9 A;  2ECV A;  4FIP A;  3ZTG A;  5AIU A;  2UZG A;  5B76 A;  3ZPV 1;  4MVT A;  4FO9 A;  4W4U A;  4ZDT A;  4AYC B;  2ECN A;  4XI1 A;  3ZVY A;  2L5U A;  3N9O A;  3L1X A;  1U6G B;  1Z60 A;  4I7D A;  2EGP A;  1HYI A;  4WZ2 A;  1N87 A;  5G0F A;  2CSZ A;  2KWN A;  5TAB A;  2VNF A;  4QF2 A;  4N4F A;  3ZYQ A;  4B7Y C;  2YUC A;  4UP5 A;  5TRB A;  4F52 B;  2M1R A;  2XEU A;  2E6R A;  3DPL R;  2IDA A;  2F42 A;  2KIZ A;  2LGG A;  2KGI A;  5LKX A;  2EOD A;  4GNE A;  2KR4 A;  4IC3 A;  2QIC A;  3LQJ A;  3RPG B;  5LKZ A;  5JG6 A;  4NN2 A;  3EB6 A;  2LXH C;  2ECT A;  2CKL A;  5KH3 A;  2KWK A;  3V43 A;  2C2L A;  2K17 A;  5B77 A;  5KH7 A;  2KWJ A;  4YAB A;  3M62 A;  2KRE A;  3RPG C;  2H0D A;  1WGM A;  4YC9 A;  1G25 A;  5DIN A;  5EYA F;  2G45 A;  2KE1 A;  2MA5 A;  2C2V S;  3PUQ A;  3SOX A;  3N9N A;  2K16 A;  2AN6 A;  1JM7 A;  3QZV A;  2LXP C;  2VPD A;  2E6S A;  5D1L B;  1WEE A;  2JMI A;  5FB0 A;  4V3K C;  2L43 A;  3IHP A;  2LN0 A;  3N9Q A;  4YAD A;  4R8P K;  1DVP A;  2VJF A;  2VP7 A;  4R7E A;  3HTK C;  2M3H A;  4L58 A;  1FP0 A;  2MNZ A;  4I7C A;  5D1M B;  3L1Z B;  1JM7 B;  2LGK A;  4X3G A;  4BHW A;  2K1J A;  3N9M A;  2ZET C;  1WES A;  4WZ0 A;  2CT2 A;  2MNY A;  5H1V A;  2LGV A;  3N9P A;  4WA6 A;  4Q6F A;  3LQI A;  2K4D A;  3HCU A;  2Y1M A;  2D8S A;  2VJF B;  5J3X A;  4N3W A;  3VK6 A;  2ECJ A;  2KFT A;  2LQ6 A;  3O7A A;  3KNV A;  2Y43 A;  4AVX A;  2YHO A;  3RTR B;  3ZVZ B;  5C13 A;  1X4J A;  4QF3 A;  2VJE A;  1V87 A;  1WEU A;  3M99 A;  1LDJ B;  4AP4 A;  3ASL A;  2MIQ A;  3LRQ A;  2YQL A;  3SOW A;  1WIL A;  1WEV A;  4ZQL A;  3O33 A;  2YYR A;  1WE9 A;  4YBT A;  3HCT A;  5B79 A;  1X4I A;  2YUR A;  4BBQ A;  2LRI C;  2YT5 A;  3C5K A;  2RSD A;  4GND A;  1CHC A;  2YSM A;  5I3L A;  3NG2 A;  3GV4 A;  3I2D A;  4L7X A;  2VJE B;  1MM3 A;  5G05 B;  3SHB A;  4LKA A;  2MT5 A;  3PHD A;  3L11 A;  4UI9 B;  1Z6U A;  4LAD B;  2FSA A;  2YRE A;  5TDW A;  3T7L A;  3LQH A;  2MA6 A;  4GNG A;  2MD7 B;  2RI7 A;  4ZUX U;  5B78 A;  2CKL B;  2G6Q A;  3O35 A;  2G43 A;  5DKA A;  3ZNI A;  3KV6 A;  2H0D B;  2OXQ C;  1E4U A;

...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)

...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

3M63A

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

pfam database annotations