4Z0OA

Cw-type zinc finger of zcwpw2 with f78d mutation
Total Genus 12

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
55
structure length
55
Chain Sequence
NMYVNKVWVQCENENCLKWRLLSSEDSAKVDHDEPWYCFMNTDSRYNNCSISEED

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
Updating...
connected with : NaN
molecule tags Protein binding
source organism Homo sapiens
publication title CW-type zinc finger of ZCWPW2 with F78D mutation
rcsb
molecule keywords Zinc finger CW-type PWWP domain protein 2
total genus 12
structure length 55
sequence length 55
ec nomenclature
pdb deposition date 2015-03-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07496 zf-CW CW-type Zinc Finger
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.40.100 Alpha Beta 2-Layer Sandwich Herpes Virus-1 Herpes Virus-1 4z0oA00
2E61A 2L7PA 4Z0RA 5SVIB 4O62A 5SVIA 5SVYA 4Z0OA 5SVXA 2RR4A 4QQ4A
chains in the Genus database with same CATH superfamily
2L80A 2G45A 1U6GB 2FSAA 2VPDA 3KQIA 4IC2A 1CHCA 2YHOA 4L58A 4F52B 2YSJA 4I7BA 3SOXA 3N9MA 4LADB 2ECIA 4UI9B 3T7LA 2ECVA 4I7CA 3C5KA 3MHHA 2QIZA 5FERA 2VJEB 2LV9A 4GB0A 2XB1A 3O35A 5G05B 2VP7A 2EODA 3KDEC 3FANA 1WESA 1X4IA 2HYED 4B7YC 3ZNIA 4GNGA 2VJEA 5B75A 2CRRA 4QQ4A 2ECNA 5C13A 1WEEA 4N4FA 1DVPA 5AITA 2EA6A 2C2LA 2DX8A 5D1LB 2I50A 5H9MA 5TABA 5G0FA 5KH3A 2L43A 4ZDTA 1FP0A 2KWOA 3M7KA 4PPEA 4R8PK 4YC9A 2F6JA 2E6RA 4A4BA 2YW8A 2LGGA 2JMJA 4L7XA 1MBMA 3NG2A 2Y1MA 3N9LA 4AYCB 3SOUA 2QICA 2L75A 1Z60A 1WENA 5SVYA 2YQLA 3ZYQA 4O64A 5FB0A 5B78A 5TRBA 2JMDA 3O37A 2YT5A 4AYCA 3O7AA 3FEHA 5KH9A 4CA1A 2XOCA 4AVXA 2MKEA 2CONA 3H7HA 2K1JA 4FO9A 4C9ZA 3VK6A 2EGPA 4H9DA 2LGLA 4FK5A 3N9PA 4I7DA 5B79A 1WFKA 1X4JA 2MA6A 4PTBA 3SOWA 2FD4A 4LLBA 2D8UA 2UZGA 3U5OA 1LDJB 4W4UA 4UP0A 1WEPA 2KKXA 3EB5A 2F42A 2JMIA 2VPGA 4YBSA 3ZPVE 1T1HA 2EXUA 5B77A 3L11A 4S3OB 2VNFA 1RMDA 3HCSA 2KR4A 5B76A 2HDPA 4A4CA 1F62A 3HCUA 3DQVR 1WEWA 4QF2A 1V87A 4IC3A 5SVIB 3N9QA 5C11A 3U5MA 2ECJA 3DPLR 2JRJA 3ZVZB 2YUCA 3O33A 5SVIA 2CSYA 5JG6A 2CT2A 3PURA 3LRQA 5TDWA 2CKLB 1JOCA 2DJAA 4BBQA 2JUNA 3T6RA 5DINA 2E61A 5LKTA 4LKAA 4O62A 3FAOA 4V3KC 2H0DB 1VFYA 1Z2QA 2L0BA 4UP5A 4XI1A 2CKLA 1E4UA 2XP0A 2BAYA 4A0CD 2LAUA 2KWNA 3ZTGA 2H0DA 3PHDA 2YQMA 4Z0RA 1VYXA 3U5PA 3ZPV1 3M99A 3QZVA 4R7EA 2M6MA 2L7PA 3U5NA 2MNYA 2FUIA 2FFWA 2LN0A 1WGMA 2K4DA 5KH7A 2AN6A 4P5OB 2G6QA 2QJ0A 4LJNA 1MM2A 2KU3A 3N9OA 4AUQB 3KV6A 4YBTA 3GV4A 2M1RA 5D1KB 2PUYA 4MVTA 5H1VA 3O36A 2VPEA 2MT5A 1MM3A 3ZVYA 1BORA 4S3OC 2RSDA 2VJFB 1IYMA 2KE1A 5TBNA 1DCQA 2ECGA 3O47A 2XEUA 3FM8C 1VD4A 4R2YA 1Z6UA 2CSVA 3KNVA 4WA6A 5SVXA 3LQHA 4F1PA 1WEQA 5G04B 2VJFA 3HCTA 2KYUA 3I2DA 3LJUX 3PUQA 4ZQLA 2MD8C 2YURA 5B8DA 4NN2A 2MD7B 3PLWA 1XWHA 5H1UA 5AIUA 4WZ3B 2LGKA 5EYAF 2KKYA 3DWDA 4ZUXU 2C2VS 1HYIA 3ASLA 2MA5A 2KGGA 3GL6A 2D8SA 3FL2A 1WILA 2XOZA 2FUUA 4B86C 2CSZA 2Y43A 5J3XA 2CRWA 1WE9A 5DKAA 4QF3A 4OGEA 3RPGB 4LK9A 5LKUA 2L5UA 2M13A 2Y1NA 3Q1DA 5FEYA 2E6SA 4Z0OA 2B0OE 2LGVA 4CCGX 3L1ZB 1G25A 5FB1A 2DSMA 2YU4A 2YSMA 4N3WA 1WEMA 3RTRB 2YREA 3LQJA 4BHWA 4YAXA 1WEUA 5I3LA 3LDYA 2EGMA 2G43A 1WEOA 2RI7A 4MSXA 5TDRA 3LVRE 1LDKC 2MIQA 4YBMA 2OWAA 4WZ2A 3SHBA 3N9NA 3EB6A 2K16A 3V43A 1FBVA 3M62A 2P57A 3IHPA 2OXQC 3JUEA 2ECWA 4Q6FA 2PNXA 5LKZA 3MDBC 5H1TA 2LXPC 1ZBDB 4YADA 2LDRA 4GNEA 1WIMA 3O34A 2KGIA 3SUBA 3C6WA 5LCWB 2XOYA 2KIZA 1HYJA 1K2FA 2KREA 2YVRA 3LQIA 2ECTA 3KV5A 3E2DA 4A49A 2YHNA 2RR4A 5LKXA 4FIPA 3HTKC 2K17A 3DDTA 4YABA 4X3GA 3RPGC 1WEVA 2LXHC 5K3QA 2NAAA 4FJCA 2IQJA 2LRIC 2MNZA 4V3LC 4GNDA 2LQ6A 2MUMA 5D1MB 2KFTA 4GNFA 1JM7B 2VPBA 2M3HA 3M63A 3T9KA 2KWKA 1X4UA 2M85A 3FJUB 2YYRA 3MHSA 4TKPB 3L1XA 4AP4A 3O70A 4WZ0A 4YATA 1JM7A 1N87A 2IDAA 2KWJA 2ZETC 4OGCA 2F6NA 2JM3A 3LVQE
chains in the Genus database with same CATH topology
2XP0A 3H7HA 1DCQA 2OWAA 3O47A 5SVIA 3FM8C 3KDEC 2LAUA 2CSVA 4Z0OA 4H9DA 3SUBA 5SVXA 3T9KA 2XOZA 3DDTA 4F1PA 3M7KA 4Z0RA 3FJUB 5SVYA 2XOYA 2CRRA 3LJUX 2CRWA 4QQ4A 2FD4A 2DJAA 2P57A 2JUNA 2D8UA 2E61A 5K3QA 5SVIB 3PLWA 3JUEA 4O62A 2YREA 4OGEA 2YVRA 2IQJA 4OGCA 2KKXA 2M13A 3FEHA 3LDYA 2KKYA 2JM3A 2L7PA 3DWDA 3E2DA 2EGMA 3Q1DA 2XOCA 3MDBC 2MKEA 2CONA 2EXUA 3LVQE 2RR4A 2B0OE 2FFWA 3LVRE
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2E61 A;  2L7P A;  4Z0R A;  5SVI B;  4O62 A;  5SVI A;  5SVY A;  4Z0O A;  5SVX A;  2RR4 A;  4QQ4 A; 
#chains in the Genus database with same CATH topology
 2L80 A;  2G45 A;  1U6G B;  2FSA A;  2VPD A;  3KQI A;  4IC2 A;  1CHC A;  2YHO A;  4L58 A;  4F52 B;  2YSJ A;  4I7B A;  3SOX A;  3N9M A;  4LAD B;  2ECI A;  4UI9 B;  3T7L A;  2ECV A;  4I7C A;  3C5K A;  3MHH A;  2QIZ A;  5FER A;  2VJE B;  2LV9 A;  4GB0 A;  2XB1 A;  3O35 A;  5G05 B;  2VP7 A;  2EOD A;  3KDE C;  3FAN A;  1WES A;  1X4I A;  2HYE D;  4B7Y C;  3ZNI A;  4GNG A;  2VJE A;  5B75 A;  2CRR A;  4QQ4 A;  2ECN A;  5C13 A;  1WEE A;  4N4F A;  1DVP A;  5AIT A;  2EA6 A;  2C2L A;  2DX8 A;  5D1L B;  2I50 A;  5H9M A;  5TAB A;  5G0F A;  5KH3 A;  2L43 A;  4ZDT A;  1FP0 A;  2KWO A;  3M7K A;  4PPE A;  4R8P K;  4YC9 A;  2F6J A;  2E6R A;  4A4B A;  2YW8 A;  2LGG A;  2JMJ A;  4L7X A;  1MBM A;  3NG2 A;  2Y1M A;  3N9L A;  4AYC B;  3SOU A;  2QIC A;  2L75 A;  1Z60 A;  1WEN A;  5SVY A;  2YQL A;  3ZYQ A;  4O64 A;  5FB0 A;  5B78 A;  5TRB A;  2JMD A;  3O37 A;  2YT5 A;  4AYC A;  3O7A A;  3FEH A;  5KH9 A;  4CA1 A;  2XOC A;  4AVX A;  2MKE A;  2CON A;  3H7H A;  2K1J A;  4FO9 A;  4C9Z A;  3VK6 A;  2EGP A;  4H9D A;  2LGL A;  4FK5 A;  3N9P A;  4I7D A;  5B79 A;  1WFK A;  1X4J A;  2MA6 A;  4PTB A;  3SOW A;  2FD4 A;  4LLB A;  2D8U A;  2UZG A;  3U5O A;  1LDJ B;  4W4U A;  4UP0 A;  1WEP A;  2KKX A;  3EB5 A;  2F42 A;  2JMI A;  2VPG A;  4YBS A;  3ZPV E;  1T1H A;  2EXU A;  5B77 A;  3L11 A;  4S3O B;  2VNF A;  1RMD A;  3HCS A;  2KR4 A;  5B76 A;  2HDP A;  4A4C A;  1F62 A;  3HCU A;  3DQV R;  1WEW A;  4QF2 A;  1V87 A;  4IC3 A;  5SVI B;  3N9Q A;  5C11 A;  3U5M A;  2ECJ A;  3DPL R;  2JRJ A;  3ZVZ B;  2YUC A;  3O33 A;  5SVI A;  2CSY A;  5JG6 A;  2CT2 A;  3PUR A;  3LRQ A;  5TDW A;  2CKL B;  1JOC A;  2DJA A;  4BBQ A;  2JUN A;  3T6R A;  5DIN A;  2E61 A;  5LKT A;  4LKA A;  4O62 A;  3FAO A;  4V3K C;  2H0D B;  1VFY A;  1Z2Q A;  2L0B A;  4UP5 A;  4XI1 A;  2CKL A;  1E4U A;  2XP0 A;  2BAY A;  4A0C D;  2LAU A;  2KWN A;  3ZTG A;  2H0D A;  3PHD A;  2YQM A;  4Z0R A;  1VYX A;  3U5P A;  3ZPV 1;  3M99 A;  3QZV A;  4R7E A;  2M6M A;  2L7P A;  3U5N A;  2MNY A;  2FUI A;  2FFW A;  2LN0 A;  1WGM A;  2K4D A;  5KH7 A;  2AN6 A;  4P5O B;  2G6Q A;  2QJ0 A;  4LJN A;  1MM2 A;  2KU3 A;  3N9O A;  4AUQ B;  3KV6 A;  4YBT A;  3GV4 A;  2M1R A;  5D1K B;  2PUY A;  4MVT A;  5H1V A;  3O36 A;  2VPE A;  2MT5 A;  1MM3 A;  3ZVY A;  1BOR A;  4S3O C;  2RSD A;  2VJF B;  1IYM A;  2KE1 A;  5TBN A;  1DCQ A;  2ECG A;  3O47 A;  2XEU A;  3FM8 C;  1VD4 A;  4R2Y A;  1Z6U A;  2CSV A;  3KNV A;  4WA6 A;  5SVX A;  3LQH A;  4F1P A;  1WEQ A;  5G04 B;  2VJF A;  3HCT A;  2KYU A;  3I2D A;  3LJU X;  3PUQ A;  4ZQL A;  2MD8 C;  2YUR A;  5B8D A;  4NN2 A;  2MD7 B;  3PLW A;  1XWH A;  5H1U A;  5AIU A;  4WZ3 B;  2LGK A;  5EYA F;  2KKY A;  3DWD A;  4ZUX U;  2C2V S;  1HYI A;  3ASL A;  2MA5 A;  2KGG A;  3GL6 A;  2D8S A;  3FL2 A;  1WIL A;  2XOZ A;  2FUU A;  4B86 C;  2CSZ A;  2Y43 A;  5J3X A;  2CRW A;  1WE9 A;  5DKA A;  4QF3 A;  4OGE A;  3RPG B;  4LK9 A;  5LKU A;  2L5U A;  2M13 A;  2Y1N A;  3Q1D A;  5FEY A;  2E6S A;  4Z0O A;  2B0O E;  2LGV A;  4CCG X;  3L1Z B;  1G25 A;  5FB1 A;  2DSM A;  2YU4 A;  2YSM A;  4N3W A;  1WEM A;  3RTR B;  2YRE A;  3LQJ A;  4BHW A;  4YAX A;  1WEU A;  5I3L A;  3LDY A;  2EGM A;  2G43 A;  1WEO A;  2RI7 A;  4MSX A;  5TDR A;  3LVR E;  1LDK C;  2MIQ A;  4YBM A;  2OWA A;  4WZ2 A;  3SHB A;  3N9N A;  3EB6 A;  2K16 A;  3V43 A;  1FBV A;  3M62 A;  2P57 A;  3IHP A;  2OXQ C;  3JUE A;  2ECW A;  4Q6F A;  2PNX A;  5LKZ A;  3MDB C;  5H1T A;  2LXP C;  1ZBD B;  4YAD A;  2LDR A;  4GNE A;  1WIM A;  3O34 A;  2KGI A;  3SUB A;  3C6W A;  5LCW B;  2XOY A;  2KIZ A;  1HYJ A;  1K2F A;  2KRE A;  2YVR A;  3LQI A;  2ECT A;  3KV5 A;  3E2D A;  4A49 A;  2YHN A;  2RR4 A;  5LKX A;  4FIP A;  3HTK C;  2K17 A;  3DDT A;  4YAB A;  4X3G A;  3RPG C;  1WEV A;  2LXH C;  5K3Q A;  2NAA A;  4FJC A;  2IQJ A;  2LRI C;  2MNZ A;  4V3L C;  4GND A;  2LQ6 A;  2MUM A;  5D1M B;  2KFT A;  4GNF A;  1JM7 B;  2VPB A;  2M3H A;  3M63 A;  3T9K A;  2KWK A;  1X4U A;  2M85 A;  3FJU B;  2YYR A;  3MHS A;  4TKP B;  3L1X A;  4AP4 A;  3O70 A;  4WZ0 A;  4YAT A;  1JM7 A;  1N87 A;  2IDA A;  2KWJ A;  2ZET C;  4OGC A;  2F6N A;  2JM3 A;  3LVQ E; 
#chains in the Genus database with same CATH homology
 2XP0 A;  3H7H A;  1DCQ A;  2OWA A;  3O47 A;  5SVI A;  3FM8 C;  3KDE C;  2LAU A;  2CSV A;  4Z0O A;  4H9D A;  3SUB A;  5SVX A;  3T9K A;  2XOZ A;  3DDT A;  4F1P A;  3M7K A;  4Z0R A;  3FJU B;  5SVY A;  2XOY A;  2CRR A;  3LJU X;  2CRW A;  4QQ4 A;  2FD4 A;  2DJA A;  2P57 A;  2JUN A;  2D8U A;  2E61 A;  5K3Q A;  5SVI B;  3PLW A;  3JUE A;  4O62 A;  2YRE A;  4OGE A;  2YVR A;  2IQJ A;  4OGC A;  2KKX A;  2M13 A;  3FEH A;  3LDY A;  2KKY A;  2JM3 A;  2L7P A;  3DWD A;  3E2D A;  2EGM A;  3Q1D A;  2XOC A;  3MDB C;  2MKE A;  2CON A;  2EXU A;  3LVQ E;  2RR4 A;  2B0O E;  2FFW A;  3LVR E; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

Application loaded.