5KH9 | Genus

Total Genus 30

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	30
sequence length	100
structure length	100
Chain Sequence	PLPWCPHLVAVCPIPAAGLDVTQPCGDCGTIQENWVCLSCYQVYCGRYINGHMLQHHGNSGHPLVLSYIDLSAWCYYCQAYVHHQALLDVKNIAHQNKFG

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

loadScript /static/js/j2s/core/package.js

loadScript /static/js/j2s/core/corejmol.z.js

loadScript /static/js/j2s/core/corescript.z.js

JSmol exec jmolApplet0 start applet null

Jmol JavaScript applet jmolApplet0__151863242509891__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__151863242509891__)

vwrOptions:

{ "name":"jmolApplet0","applet":true,"documentBase":"https://genus.fuw.edu.pl/view/5KH9/A/","platform":"J.awtjs2d.Platform","fullName":"jmolApplet0__151863242509891__","codePath":"https:/static/js/j2s/","display":"jmolApplet0_canvas2d","signedApplet":"true","appletReadyCallback":"Jmol._readyCallback","statusListener":"[J.appletjs.Jmol object]","syncId":"151863242509891","bgcolor":"white" }

setting document base to "https://genus.fuw.edu.pl/view/5KH9/A/"

Jmol Version: 14.29.13 2018-04-17 17:17

java.vendor: Java2Script (HTML5)

java.version: 2018-01-28 23:38:52 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

Access: ALL

memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:jmolApplet0 (signed)

Jmol getValue emulate null

defaults = "Jmol"

Jmol getValue boxbgcolor null

Jmol getValue bgcolor white

backgroundColor = "white"

Jmol getValue ANIMFRAMECallback null

Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

callback set for APPLETREADYCallback Jmol._readyCallback APPLETREADY

Jmol getValue ATOMMOVEDCallback null

Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

Jmol getValue MINIMIZATIONCallback null

Jmol getValue SERVICECallback null

Jmol getValue PICKCallback null

Jmol getValue RESIZECallback null

Jmol getValue SCRIPTCallback null

Jmol getValue SYNCCallback null

Jmol getValue STRUCTUREMODIFIEDCallback null

Jmol getValue doTranslate null

language=en_US

Jmol getValue popupMenu null

Jmol getValue script null

Jmol getValue loadInline null

Jmol getValue load null

Jmol applet jmolApplet0__151863242509891__ ready

script 1 started

platformSpeed = 8

Viewer cachePut cache://localLOAD_/file/5d01427293f625339ec3128b/pdb.gz

Viewer cachePut https://genus.fuw.edu.pl/file/5d01427293f625339ec3128b/pdb.gz

FileManager.getAtomSetCollectionFromFile(/file/5d01427293f625339ec3128b/pdb.gz)

loadScript /static/js/j2s/core/corezip.z.js

The Resolver thinks Pdb

loadScript /static/js/j2s/core/corebio.z.js

Time for openFile(/file/5d01427293f625339ec3128b/pdb.gz): 1498 ms

reading 100 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Jmol

100 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 16 ms

Adding embedded #jmolscript: select ({0:99});backbone only;select *;

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

molecule tags	Hydrolase
source organism	Homo sapiens
publication title	Small Molecule Antagonists of the Interaction between the Histone Deacetylase 6 Zinc-Finger Domain and Ubiquitin. pubmed doi rcsb
molecule keywords	Histone deacetylase 6
total genus	30
structure length	100
sequence length	100
ec nomenclature	ec 3.5.1.98: Histone deacetylase.
pdb deposition date	2016-06-14

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF02148	zf-UBP	Zn-finger in ubiquitin-hydrolases and other protein

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.30.40.10	Alpha Beta	2-Layer Sandwich	Herpes Virus-1	Zinc/RING finger domain, C3HC4 (zinc finger)	5kh9A00

2LDRA 4UI9B 2KU3A 2VJEB 2L75A 2VP7A 4LADB 2ECWA 2OXQC 2K4DA 2VPEA 5LKXA 2YREA 3HTKC 1WEQA 4A0CD 2BAYA 2KGIA 2ZETC 1HYIA 1X4UA 4PTBA 2MIQA 3VK6A 4I7CA 4ZDTA 2KREA 2MNZA 2KFTA 2UZGA 2LGLA 2PUYA 3T6RA 3ZPV1 4IC3A 1Z6UA 1T1HA 2NAAA 3O7AA 2EA6A 3U5NA 1WFKA 3T7LA 5G04B 4AUQB 2QJ0A 3KNVA 2L5UA 5DKAA 1VD4A 4LK9A 3V43A 1WEMA 3N9PA 2MA5A 4GNFA 3U5PA 1U6GB 1HYJA 2EODA 2F6NA 4BHWA 3SOUA 3ZPVE 3N9LA 5LCWB 4I7BA 5KH7A 4B7YC 1JM7B 4LJNA 2AN6A 2FUIA 2KGGA 3ZVYA 3ZNIA 5FERA 3O35A 3MHSA 2M85A 5H1VA 1CHCA 1X4IA 2CSZA 4YABA 5LKUA 3HCUA 3DPLR 4Q6FA 2JMDA 2G6QA 5AITA 1VFYA 3RPGB 4LKAA 3PURA 1WENA 1Z2QA 4C9ZA 5TDWA 3SOXA 5FB1A 4GB0A 2Y1NA 4YADA 3LRQA 2M6MA 3O70A 5TBNA 2KR4A 2YHOA 4V3KC 4AYCB 2M1RA 1WEVA 2G43A 2VPDA 4FJCA 4AP4A 2ECTA 4CA1A 4UP5A 2EGPA 4F52B 5C11A 3O33A 5I3LA 3EB5A 1X4JA 5H1TA 2QIZA 1WESA 3M99A 5H9MA 2ECJA 1ZBDB 3QZVA 2IDAA 1VYXA 1WEOA 2KYUA 3LQIA 2K16A 4PPEA 4FIPA 5TDRA 2K17A 2LRIC 2ECVA 2F6JA 2C2VS 4AVXA 1XWHA 1WEEA 2VNFA 2Y43A 5G0FA 4TKPB 4YC9A 5AIUA 2F42A 2JMIA 5D1KB 4B86C 2LGVA 2M3HA 2VJFB 3PUQA 2H0DA 3ZTGA 4O64A 3O34A 2YUCA 4AYCA 2Y1MA 2FSAA 4CCGX 3IHPA 5C13A 4MVTA 1MM3A 3N9MA 5DINA 2VJEA 5TABA 2KWKA 2YW8A 1Z60A 2JMJA 2ECIA 5FEYA 2L43A 3FL2A 4UP0A 5D1LB 2YU4A 3MHHA 5LKZA 4YATA 3ZVZB 2CKLB 4R8PK 2YSMA 5EYAF 2YQLA 4L58A 2YQMA 4MSXA 2LN0A 4GNDA 2KWNA 2YT5A 4L7XA 4YBTA 4WZ3B 2D8SA 5G05B 4A49A 4FK5A 4S3OB 1E4UA 1WEUA 3ASLA 1N87A 3GL6A 4QF3A 2XB1A 3HCSA 2MD8C 2HYED 2FUUA 4N4FA 3EB6A 1WIMA 3M62A 3KV6A 2CSYA 1MM2A 3C5KA 4WZ2A 2E6SA 2LXHC 2MNYA 3RTRB 4X3GA 1F62A 1WEWA 4V3LC 1JM7A 2KIZA 3U5OA 2L0BA 3N9QA 3LQHA 2YHNA 2C2LA 2G45A 1WILA 2MA6A 2JRJA 4GNGA 3HCTA 2VPBA 3SHBA 3RPGC 4BBQA 1K2FA 3I2DA 5B77A 3NG2A 4ZUXU 2VPGA 4XI1A 4A4CA 2LGGA 5H1UA 2LQ6A 4YBMA 2DX8A 3L11A 5KH3A 4N3WA 2LGKA 1WEPA 4R2YA 5JG6A 4NN2A 3KQIA 5TRBA 2KE1A 4I7DA 4A4BA 2ECGA 4WA6A 5J3XA 2MD7B 2MT5A 3U5MA 4LLBA 4IC2A 2RI7A 3N9OA 2XEUA 2QICA 2KWOA 1FP0A 5B79A 3L1XA 3KV5A 4QF2A 2YSJA 1LDJB 2I50A 3GV4A 2L80A 5KH9A 3SOWA 4FO9A 2VJFA 1FBVA 2YYRA 4WZ0A 5B8DA 2MUMA 2CT2A 1IYMA 4ZQLA 3DQVR 2LV9A 4YBSA 5B76A 3L1ZB 3ZYQA 2ECNA 1BORA 4GNEA 1DVPA 5B78A 3LQJA 1G25A 2HDPA 3N9NA 4YAXA 3O36A 5B75A 2RSDA 3PHDA 2E6RA 1RMDA 2LXPC 2YURA 1WGMA 2KWJA 2PNXA 3C6WA 2H0DB 5D1MB 1JOCA 1V87A 4W4UA 2CKLA 2K1JA 1LDKC 4P5OB 4R7EA 5LKTA 4S3OC 3O37A 1WE9A 5FB0A 3M63A
chains in the Genus database with same CATH superfamily

2LDRA 2L7PA 4UI9B 2KU3A 2VJEB 2L75A 2VP7A 4LADB 2CRRA 2ECWA 2OXQC 2IQJA 2K4DA 2YVRA 2VPEA 5LKXA 2YREA 3HTKC 1WEQA 4A0CD 4Z0OA 2BAYA 2KGIA 2ZETC 1HYIA 1X4UA 4PTBA 2MIQA 3VK6A 4I7CA 5SVIB 4ZDTA 2KREA 2MNZA 2KFTA 2UZGA 2LGLA 2PUYA 3T6RA 3ZPV1 4IC3A 1Z6UA 1T1HA 2NAAA 3T9KA 2CONA 3O7AA 2EA6A 3U5NA 1WFKA 3T7LA 5G04B 2XOYA 3LJUX 4AUQB 2QJ0A 3KNVA 2L5UA 5DKAA 1VD4A 4LK9A 3V43A 1WEMA 3N9PA 2MA5A 3DDTA 4GNFA 3U5PA 1U6GB 1HYJA 2EODA 2F6NA 4BHWA 3FJUB 3SOUA 3ZPVE 3N9LA 5LCWB 4I7BA 5KH7A 4B7YC 1JM7B 4LJNA 2AN6A 2LAUA 2FUIA 2KGGA 2CRWA 3ZVYA 3ZNIA 5FERA 3O35A 3MHSA 2M85A 5H1VA 1CHCA 1X4IA 2CSZA 4YABA 5LKUA 3HCUA 3DPLR 4Q6FA 2JMDA 4OGCA 2G6QA 5AITA 1VFYA 3RPGB 4LKAA 3PURA 1WENA 1Z2QA 4C9ZA 3M7KA 5TDWA 3SOXA 5FB1A 4GB0A 2Y1NA 4YADA 3LRQA 2M6MA 3O70A 5TBNA 2KR4A 2YHOA 3O47A 4V3KC 4AYCB 2M1RA 1WEVA 2G43A 2VPDA 4FJCA 4AP4A 2ECTA 5SVXA 4CA1A 4UP5A 2B0OE 2EGPA 4F52B 3LVQE 5C11A 3O33A 5I3LA 3SUBA 3EB5A 1X4JA 5H1TA 2QIZA 1WESA 3M99A 5H9MA 2ECJA 1ZBDB 3QZVA 2IDAA 1VYXA 1WEOA 2KYUA 3LQIA 2K16A 2OWAA 3FM8C 4FIPA 4PPEA 2K17A 5TDRA 2LRIC 2ECVA 2F6JA 2C2VS 4AVXA 1XWHA 1WEEA 4H9DA 2VNFA 2Y43A 5G0FA 4TKPB 4YC9A 5AIUA 3MDBC 2KKYA 3PLWA 2F42A 2JMIA 5D1KB 4B86C 2LGVA 2M3HA 2VJFB 3PUQA 2H0DA 3ZTGA 4O64A 3O34A 2YUCA 4AYCA 2Y1MA 2FSAA 4CCGX 4O62A 3IHPA 5C13A 4MVTA 1MM3A 3N9MA 5DINA 2VJEA 5TABA 2XP0A 3LVRE 5K3QA 2KWKA 2YW8A 1Z60A 2JMJA 2ECIA 5FEYA 2L43A 3JUEA 3FL2A 4UP0A 5D1LB 2YU4A 3MHHA 5LKZA 4YATA 3ZVZB 2CKLB 5SVIA 4R8PK 2YSMA 5EYAF 2KKXA 2YQLA 3Q1DA 3H7HA 4L58A 2YQMA 4MSXA 2LN0A 4GNDA 2KWNA 2YT5A 4L7XA 2RR4A 4YBTA 3FAOA 4WZ3B 2D8SA 1DCQA 5G05B 4A49A 4FK5A 4S3OB 1E4UA 1WEUA 3ASLA 1N87A 3GL6A 4QF3A 4Z0RA 2XB1A 3HCSA 2HYED 2MD8C 2FUUA 4N4FA 3EB6A 4QQ4A 1WIMA 3M62A 3KV6A 2CSYA 1MM2A 3C5KA 4WZ2A 2E6SA 2LXHC 2MNYA 3LDYA 3RTRB 4X3GA 1F62A 1WEWA 4V3LC 1JM7A 2KIZA 3U5OA 2L0BA 3N9QA 3LQHA 3FANA 2YHNA 2C2LA 2G45A 1WILA 2MA6A 2P57A 2JRJA 4GNGA 3HCTA 2VPBA 3SHBA 3RPGC 4BBQA 3KDEC 1K2FA 3I2DA 5B77A 3NG2A 4ZUXU 2XOZA 2VPGA 4XI1A 1MBMA 4A4CA 2LGGA 5H1UA 2LQ6A 2E61A 4YBMA 2DX8A 3L11A 5KH3A 4N3WA 2LGKA 1WEPA 3DWDA 4R2YA 5JG6A 3E2DA 4NN2A 3KQIA 2DJAA 2EXUA 5TRBA 2D8UA 2KE1A 4I7DA 2XOCA 4A4BA 2ECGA 4WA6A 5J3XA 2MD7B 2MT5A 3U5MA 4LLBA 2JM3A 4IC2A 2M13A 2FFWA 2RI7A 3N9OA 5SVYA 2XEUA 2QICA 2KWOA 1FP0A 5B79A 3L1XA 3KV5A 4QF2A 2YSJA 1LDJB 2I50A 3GV4A 2L80A 5KH9A 3SOWA 4FO9A 2VJFA 1FBVA 2YYRA 4WZ0A 5B8DA 2MUMA 2CT2A 1IYMA 4ZQLA 3DQVR 2LV9A 4YBSA 3FEHA 5B76A 3L1ZB 3ZYQA 2ECNA 1BORA 4GNEA 1DVPA 2FD4A 5B78A 4F1PA 3LQJA 1G25A 2HDPA 3N9NA 2JUNA 4YAXA 3O36A 5B75A 2RSDA 3PHDA 2E6RA 2EGMA 2MKEA 1RMDA 4OGEA 2LXPC 2YURA 1WGMA 2KWJA 2PNXA 3C6WA 2H0DB 5D1MB 1JOCA 2CSVA 1V87A 4W4UA 2CKLA 2K1JA 1LDKC 4P5OB 4R7EA 2DSMA 5LKTA 4S3OC 3O37A 1WE9A 5FB0A 3M63A
chains in the Genus database with same CATH topology

#chains in the Genus database with same CATH superfamily
 2LDR A;  4UI9 B;  2KU3 A;  2VJE B;  2L75 A;  2VP7 A;  4LAD B;  2ECW A;  2OXQ C;  2K4D A;  2VPE A;  5LKX A;  2YRE A;  3HTK C;  1WEQ A;  4A0C D;  2BAY A;  2KGI A;  2ZET C;  1HYI A;  1X4U A;  4PTB A;  2MIQ A;  3VK6 A;  4I7C A;  4ZDT A;  2KRE A;  2MNZ A;  2KFT A;  2UZG A;  2LGL A;  2PUY A;  3T6R A;  3ZPV 1;  4IC3 A;  1Z6U A;  1T1H A;  2NAA A;  3O7A A;  2EA6 A;  3U5N A;  1WFK A;  3T7L A;  5G04 B;  4AUQ B;  2QJ0 A;  3KNV A;  2L5U A;  5DKA A;  1VD4 A;  4LK9 A;  3V43 A;  1WEM A;  3N9P A;  2MA5 A;  4GNF A;  3U5P A;  1U6G B;  1HYJ A;  2EOD A;  2F6N A;  4BHW A;  3SOU A;  3ZPV E;  3N9L A;  5LCW B;  4I7B A;  5KH7 A;  4B7Y C;  1JM7 B;  4LJN A;  2AN6 A;  2FUI A;  2KGG A;  3ZVY A;  3ZNI A;  5FER A;  3O35 A;  3MHS A;  2M85 A;  5H1V A;  1CHC A;  1X4I A;  2CSZ A;  4YAB A;  5LKU A;  3HCU A;  3DPL R;  4Q6F A;  2JMD A;  2G6Q A;  5AIT A;  1VFY A;  3RPG B;  4LKA A;  3PUR A;  1WEN A;  1Z2Q A;  4C9Z A;  5TDW A;  3SOX A;  5FB1 A;  4GB0 A;  2Y1N A;  4YAD A;  3LRQ A;  2M6M A;  3O70 A;  5TBN A;  2KR4 A;  2YHO A;  4V3K C;  4AYC B;  2M1R A;  1WEV A;  2G43 A;  2VPD A;  4FJC A;  4AP4 A;  2ECT A;  4CA1 A;  4UP5 A;  2EGP A;  4F52 B;  5C11 A;  3O33 A;  5I3L A;  3EB5 A;  1X4J A;  5H1T A;  2QIZ A;  1WES A;  3M99 A;  5H9M A;  2ECJ A;  1ZBD B;  3QZV A;  2IDA A;  1VYX A;  1WEO A;  2KYU A;  3LQI A;  2K16 A;  4PPE A;  4FIP A;  5TDR A;  2K17 A;  2LRI C;  2ECV A;  2F6J A;  2C2V S;  4AVX A;  1XWH A;  1WEE A;  2VNF A;  2Y43 A;  5G0F A;  4TKP B;  4YC9 A;  5AIU A;  2F42 A;  2JMI A;  5D1K B;  4B86 C;  2LGV A;  2M3H A;  2VJF B;  3PUQ A;  2H0D A;  3ZTG A;  4O64 A;  3O34 A;  2YUC A;  4AYC A;  2Y1M A;  2FSA A;  4CCG X;  3IHP A;  5C13 A;  4MVT A;  1MM3 A;  3N9M A;  5DIN A;  2VJE A;  5TAB A;  2KWK A;  2YW8 A;  1Z60 A;  2JMJ A;  2ECI A;  5FEY A;  2L43 A;  3FL2 A;  4UP0 A;  5D1L B;  2YU4 A;  3MHH A;  5LKZ A;  4YAT A;  3ZVZ B;  2CKL B;  4R8P K;  2YSM A;  5EYA F;  2YQL A;  4L58 A;  2YQM A;  4MSX A;  2LN0 A;  4GND A;  2KWN A;  2YT5 A;  4L7X A;  4YBT A;  4WZ3 B;  2D8S A;  5G05 B;  4A49 A;  4FK5 A;  4S3O B;  1E4U A;  1WEU A;  3ASL A;  1N87 A;  3GL6 A;  4QF3 A;  2XB1 A;  3HCS A;  2MD8 C;  2HYE D;  2FUU A;  4N4F A;  3EB6 A;  1WIM A;  3M62 A;  3KV6 A;  2CSY A;  1MM2 A;  3C5K A;  4WZ2 A;  2E6S A;  2LXH C;  2MNY A;  3RTR B;  4X3G A;  1F62 A;  1WEW A;  4V3L C;  1JM7 A;  2KIZ A;  3U5O A;  2L0B A;  3N9Q A;  3LQH A;  2YHN A;  2C2L A;  2G45 A;  1WIL A;  2MA6 A;  2JRJ A;  4GNG A;  3HCT A;  2VPB A;  3SHB A;  3RPG C;  4BBQ A;  1K2F A;  3I2D A;  5B77 A;  3NG2 A;  4ZUX U;  2VPG A;  4XI1 A;  4A4C A;  2LGG A;  5H1U A;  2LQ6 A;  4YBM A;  2DX8 A;  3L11 A;  5KH3 A;  4N3W A;  2LGK A;  1WEP A;  4R2Y A;  5JG6 A;  4NN2 A;  3KQI A;  5TRB A;  2KE1 A;  4I7D A;  4A4B A;  2ECG A;  4WA6 A;  5J3X A;  2MD7 B;  2MT5 A;  3U5M A;  4LLB A;  4IC2 A;  2RI7 A;  3N9O A;  2XEU A;  2QIC A;  2KWO A;  1FP0 A;  5B79 A;  3L1X A;  3KV5 A;  4QF2 A;  2YSJ A;  1LDJ B;  2I50 A;  3GV4 A;  2L80 A;  5KH9 A;  3SOW A;  4FO9 A;  2VJF A;  1FBV A;  2YYR A;  4WZ0 A;  5B8D A;  2MUM A;  2CT2 A;  1IYM A;  4ZQL A;  3DQV R;  2LV9 A;  4YBS A;  5B76 A;  3L1Z B;  3ZYQ A;  2ECN A;  1BOR A;  4GNE A;  1DVP A;  5B78 A;  3LQJ A;  1G25 A;  2HDP A;  3N9N A;  4YAX A;  3O36 A;  5B75 A;  2RSD A;  3PHD A;  2E6R A;  1RMD A;  2LXP C;  2YUR A;  1WGM A;  2KWJ A;  2PNX A;  3C6W A;  2H0D B;  5D1M B;  1JOC A;  1V87 A;  4W4U A;  2CKL A;  2K1J A;  1LDK C;  4P5O B;  4R7E A;  5LKT A;  4S3O C;  3O37 A;  1WE9 A;  5FB0 A;  3M63 A; 
#chains in the Genus database with same CATH topology
 2LDR A;  2L7P A;  4UI9 B;  2KU3 A;  2VJE B;  2L75 A;  2VP7 A;  4LAD B;  2CRR A;  2ECW A;  2OXQ C;  2IQJ A;  2K4D A;  2YVR A;  2VPE A;  5LKX A;  2YRE A;  3HTK C;  1WEQ A;  4A0C D;  4Z0O A;  2BAY A;  2KGI A;  2ZET C;  1HYI A;  1X4U A;  4PTB A;  2MIQ A;  3VK6 A;  4I7C A;  5SVI B;  4ZDT A;  2KRE A;  2MNZ A;  2KFT A;  2UZG A;  2LGL A;  2PUY A;  3T6R A;  3ZPV 1;  4IC3 A;  1Z6U A;  1T1H A;  2NAA A;  3T9K A;  2CON A;  3O7A A;  2EA6 A;  3U5N A;  1WFK A;  3T7L A;  5G04 B;  2XOY A;  3LJU X;  4AUQ B;  2QJ0 A;  3KNV A;  2L5U A;  5DKA A;  1VD4 A;  4LK9 A;  3V43 A;  1WEM A;  3N9P A;  2MA5 A;  3DDT A;  4GNF A;  3U5P A;  1U6G B;  1HYJ A;  2EOD A;  2F6N A;  4BHW A;  3FJU B;  3SOU A;  3ZPV E;  3N9L A;  5LCW B;  4I7B A;  5KH7 A;  4B7Y C;  1JM7 B;  4LJN A;  2AN6 A;  2LAU A;  2FUI A;  2KGG A;  2CRW A;  3ZVY A;  3ZNI A;  5FER A;  3O35 A;  3MHS A;  2M85 A;  5H1V A;  1CHC A;  1X4I A;  2CSZ A;  4YAB A;  5LKU A;  3HCU A;  3DPL R;  4Q6F A;  2JMD A;  4OGC A;  2G6Q A;  5AIT A;  1VFY A;  3RPG B;  4LKA A;  3PUR A;  1WEN A;  1Z2Q A;  4C9Z A;  3M7K A;  5TDW A;  3SOX A;  5FB1 A;  4GB0 A;  2Y1N A;  4YAD A;  3LRQ A;  2M6M A;  3O70 A;  5TBN A;  2KR4 A;  2YHO A;  3O47 A;  4V3K C;  4AYC B;  2M1R A;  1WEV A;  2G43 A;  2VPD A;  4FJC A;  4AP4 A;  2ECT A;  5SVX A;  4CA1 A;  4UP5 A;  2B0O E;  2EGP A;  4F52 B;  3LVQ E;  5C11 A;  3O33 A;  5I3L A;  3SUB A;  3EB5 A;  1X4J A;  5H1T A;  2QIZ A;  1WES A;  3M99 A;  5H9M A;  2ECJ A;  1ZBD B;  3QZV A;  2IDA A;  1VYX A;  1WEO A;  2KYU A;  3LQI A;  2K16 A;  2OWA A;  3FM8 C;  4FIP A;  4PPE A;  2K17 A;  5TDR A;  2LRI C;  2ECV A;  2F6J A;  2C2V S;  4AVX A;  1XWH A;  1WEE A;  4H9D A;  2VNF A;  2Y43 A;  5G0F A;  4TKP B;  4YC9 A;  5AIU A;  3MDB C;  2KKY A;  3PLW A;  2F42 A;  2JMI A;  5D1K B;  4B86 C;  2LGV A;  2M3H A;  2VJF B;  3PUQ A;  2H0D A;  3ZTG A;  4O64 A;  3O34 A;  2YUC A;  4AYC A;  2Y1M A;  2FSA A;  4CCG X;  4O62 A;  3IHP A;  5C13 A;  4MVT A;  1MM3 A;  3N9M A;  5DIN A;  2VJE A;  5TAB A;  2XP0 A;  3LVR E;  5K3Q A;  2KWK A;  2YW8 A;  1Z60 A;  2JMJ A;  2ECI A;  5FEY A;  2L43 A;  3JUE A;  3FL2 A;  4UP0 A;  5D1L B;  2YU4 A;  3MHH A;  5LKZ A;  4YAT A;  3ZVZ B;  2CKL B;  5SVI A;  4R8P K;  2YSM A;  5EYA F;  2KKX A;  2YQL A;  3Q1D A;  3H7H A;  4L58 A;  2YQM A;  4MSX A;  2LN0 A;  4GND A;  2KWN A;  2YT5 A;  4L7X A;  2RR4 A;  4YBT A;  3FAO A;  4WZ3 B;  2D8S A;  1DCQ A;  5G05 B;  4A49 A;  4FK5 A;  4S3O B;  1E4U A;  1WEU A;  3ASL A;  1N87 A;  3GL6 A;  4QF3 A;  4Z0R A;  2XB1 A;  3HCS A;  2HYE D;  2MD8 C;  2FUU A;  4N4F A;  3EB6 A;  4QQ4 A;  1WIM A;  3M62 A;  3KV6 A;  2CSY A;  1MM2 A;  3C5K A;  4WZ2 A;  2E6S A;  2LXH C;  2MNY A;  3LDY A;  3RTR B;  4X3G A;  1F62 A;  1WEW A;  4V3L C;  1JM7 A;  2KIZ A;  3U5O A;  2L0B A;  3N9Q A;  3LQH A;  3FAN A;  2YHN A;  2C2L A;  2G45 A;  1WIL A;  2MA6 A;  2P57 A;  2JRJ A;  4GNG A;  3HCT A;  2VPB A;  3SHB A;  3RPG C;  4BBQ A;  3KDE C;  1K2F A;  3I2D A;  5B77 A;  3NG2 A;  4ZUX U;  2XOZ A;  2VPG A;  4XI1 A;  1MBM A;  4A4C A;  2LGG A;  5H1U A;  2LQ6 A;  2E61 A;  4YBM A;  2DX8 A;  3L11 A;  5KH3 A;  4N3W A;  2LGK A;  1WEP A;  3DWD A;  4R2Y A;  5JG6 A;  3E2D A;  4NN2 A;  3KQI A;  2DJA A;  2EXU A;  5TRB A;  2D8U A;  2KE1 A;  4I7D A;  2XOC A;  4A4B A;  2ECG A;  4WA6 A;  5J3X A;  2MD7 B;  2MT5 A;  3U5M A;  4LLB A;  2JM3 A;  4IC2 A;  2M13 A;  2FFW A;  2RI7 A;  3N9O A;  5SVY A;  2XEU A;  2QIC A;  2KWO A;  1FP0 A;  5B79 A;  3L1X A;  3KV5 A;  4QF2 A;  2YSJ A;  1LDJ B;  2I50 A;  3GV4 A;  2L80 A;  5KH9 A;  3SOW A;  4FO9 A;  2VJF A;  1FBV A;  2YYR A;  4WZ0 A;  5B8D A;  2MUM A;  2CT2 A;  1IYM A;  4ZQL A;  3DQV R;  2LV9 A;  4YBS A;  3FEH A;  5B76 A;  3L1Z B;  3ZYQ A;  2ECN A;  1BOR A;  4GNE A;  1DVP A;  2FD4 A;  5B78 A;  4F1P A;  3LQJ A;  1G25 A;  2HDP A;  3N9N A;  2JUN A;  4YAX A;  3O36 A;  5B75 A;  2RSD A;  3PHD A;  2E6R A;  2EGM A;  2MKE A;  1RMD A;  4OGE A;  2LXP C;  2YUR A;  1WGM A;  2KWJ A;  2PNX A;  3C6W A;  2H0D B;  5D1M B;  1JOC A;  2CSV A;  1V87 A;  4W4U A;  2CKL A;  2K1J A;  1LDK C;  4P5O B;  4R7E A;  2DSM A;  5LKT A;  4S3O C;  3O37 A;  1WE9 A;  5FB0 A;  3M63 A; 
#chains in the Genus database with same CATH homology
 2LDR A;  4UI9 B;  2KU3 A;  2VJE B;  2L75 A;  2VP7 A;  4LAD B;  2ECW A;  2OXQ C;  2K4D A;  2VPE A;  5LKX A;  2YRE A;  3HTK C;  1WEQ A;  4A0C D;  2BAY A;  2KGI A;  2ZET C;  1HYI A;  1X4U A;  4PTB A;  2MIQ A;  3VK6 A;  4I7C A;  4ZDT A;  2KRE A;  2MNZ A;  2KFT A;  2UZG A;  2LGL A;  2PUY A;  3T6R A;  3ZPV 1;  4IC3 A;  1Z6U A;  1T1H A;  2NAA A;  3O7A A;  2EA6 A;  3U5N A;  1WFK A;  3T7L A;  5G04 B;  4AUQ B;  2QJ0 A;  3KNV A;  2L5U A;  5DKA A;  1VD4 A;  4LK9 A;  3V43 A;  1WEM A;  3N9P A;  2MA5 A;  4GNF A;  3U5P A;  1U6G B;  1HYJ A;  2EOD A;  2F6N A;  4BHW A;  3SOU A;  3ZPV E;  3N9L A;  5LCW B;  4I7B A;  5KH7 A;  4B7Y C;  1JM7 B;  4LJN A;  2AN6 A;  2FUI A;  2KGG A;  3ZVY A;  3ZNI A;  5FER A;  3O35 A;  3MHS A;  2M85 A;  5H1V A;  1CHC A;  1X4I A;  2CSZ A;  4YAB A;  5LKU A;  3HCU A;  3DPL R;  4Q6F A;  2JMD A;  2G6Q A;  5AIT A;  1VFY A;  3RPG B;  4LKA A;  3PUR A;  1WEN A;  1Z2Q A;  4C9Z A;  5TDW A;  3SOX A;  5FB1 A;  4GB0 A;  2Y1N A;  4YAD A;  3LRQ A;  2M6M A;  3O70 A;  5TBN A;  2KR4 A;  2YHO A;  4V3K C;  4AYC B;  2M1R A;  1WEV A;  2G43 A;  2VPD A;  4FJC A;  4AP4 A;  2ECT A;  4CA1 A;  4UP5 A;  2EGP A;  4F52 B;  5C11 A;  3O33 A;  5I3L A;  3EB5 A;  1X4J A;  5H1T A;  2QIZ A;  1WES A;  3M99 A;  5H9M A;  2ECJ A;  1ZBD B;  3QZV A;  2IDA A;  1VYX A;  1WEO A;  2KYU A;  3LQI A;  2K16 A;  4PPE A;  4FIP A;  5TDR A;  2K17 A;  2LRI C;  2ECV A;  2F6J A;  2C2V S;  4AVX A;  1XWH A;  1WEE A;  2VNF A;  2Y43 A;  5G0F A;  4TKP B;  4YC9 A;  5AIU A;  2F42 A;  2JMI A;  5D1K B;  4B86 C;  2LGV A;  2M3H A;  2VJF B;  3PUQ A;  2H0D A;  3ZTG A;  4O64 A;  3O34 A;  2YUC A;  4AYC A;  2Y1M A;  2FSA A;  4CCG X;  3IHP A;  5C13 A;  4MVT A;  1MM3 A;  3N9M A;  5DIN A;  2VJE A;  5TAB A;  2KWK A;  2YW8 A;  1Z60 A;  2JMJ A;  2ECI A;  5FEY A;  2L43 A;  3FL2 A;  4UP0 A;  5D1L B;  2YU4 A;  3MHH A;  5LKZ A;  4YAT A;  3ZVZ B;  2CKL B;  4R8P K;  2YSM A;  5EYA F;  2YQL A;  4L58 A;  2YQM A;  4MSX A;  2LN0 A;  4GND A;  2KWN A;  2YT5 A;  4L7X A;  4YBT A;  4WZ3 B;  2D8S A;  5G05 B;  4A49 A;  4FK5 A;  4S3O B;  1E4U A;  1WEU A;  3ASL A;  1N87 A;  3GL6 A;  4QF3 A;  2XB1 A;  3HCS A;  2MD8 C;  2HYE D;  2FUU A;  4N4F A;  3EB6 A;  1WIM A;  3M62 A;  3KV6 A;  2CSY A;  1MM2 A;  3C5K A;  4WZ2 A;  2E6S A;  2LXH C;  2MNY A;  3RTR B;  4X3G A;  1F62 A;  1WEW A;  4V3L C;  1JM7 A;  2KIZ A;  3U5O A;  2L0B A;  3N9Q A;  3LQH A;  2YHN A;  2C2L A;  2G45 A;  1WIL A;  2MA6 A;  2JRJ A;  4GNG A;  3HCT A;  2VPB A;  3SHB A;  3RPG C;  4BBQ A;  1K2F A;  3I2D A;  5B77 A;  3NG2 A;  4ZUX U;  2VPG A;  4XI1 A;  4A4C A;  2LGG A;  5H1U A;  2LQ6 A;  4YBM A;  2DX8 A;  3L11 A;  5KH3 A;  4N3W A;  2LGK A;  1WEP A;  4R2Y A;  5JG6 A;  4NN2 A;  3KQI A;  5TRB A;  2KE1 A;  4I7D A;  4A4B A;  2ECG A;  4WA6 A;  5J3X A;  2MD7 B;  2MT5 A;  3U5M A;  4LLB A;  4IC2 A;  2RI7 A;  3N9O A;  2XEU A;  2QIC A;  2KWO A;  1FP0 A;  5B79 A;  3L1X A;  3KV5 A;  4QF2 A;  2YSJ A;  1LDJ B;  2I50 A;  3GV4 A;  2L80 A;  5KH9 A;  3SOW A;  4FO9 A;  2VJF A;  1FBV A;  2YYR A;  4WZ0 A;  5B8D A;  2MUM A;  2CT2 A;  1IYM A;  4ZQL A;  3DQV R;  2LV9 A;  4YBS A;  5B76 A;  3L1Z B;  3ZYQ A;  2ECN A;  1BOR A;  4GNE A;  1DVP A;  5B78 A;  3LQJ A;  1G25 A;  2HDP A;  3N9N A;  4YAX A;  3O36 A;  5B75 A;  2RSD A;  3PHD A;  2E6R A;  1RMD A;  2LXP C;  2YUR A;  1WGM A;  2KWJ A;  2PNX A;  3C6W A;  2H0D B;  5D1M B;  1JOC A;  1V87 A;  4W4U A;  2CKL A;  2K1J A;  1LDK C;  4P5O B;  4R7E A;  5LKT A;  4S3O C;  3O37 A;  1WE9 A;  5FB0 A;  3M63 A;

...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)

...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

5KH9A

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

pfam database annotations