2H6LA

X-ray crystal structure of the metal-containing protein af0104 from archaeoglobus fulgidus. northeast structural genomics consortium target gr103.
Total Genus 28
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
28
sequence length
140
structure length
140
Chain Sequence
b'MKVFEFEVGKGFLLRLDYGKDLVRQIEEFLEEKGIHAAHISAIGAVRSAVIGYYDQEKKEYVKKELMEPLEILSLSGNVSMKDSKPFCHIHVLLGKDGEVYGGHLFSAEVFACEVFVLPLSGEAPERAFDEQTGLFLWLE'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Three dimensional structure of the hypothetical protein AF0104 at the 2.0 A resolution.
rcsb
molecule keywords Hypothetical protein
source organism Archaeoglobus fulgidus
molecule tags Structural genomics, unknown function
total genus 28
structure length 140
sequence length 140
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2006-05-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03479 DUF296 Plants and Prokaryotes Conserved (PCC) domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1330.80 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30; Chain: A; Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 2h6lA00
2DT4A 4BT7A 4BT2A 2NMUA 4BT6A 3HWUA 4BT5A 2HX0A 1XV2A 2P6YA 4BT3A 3HTNA 2H6LA 4BT4A
chains in the Genus database with same CATH superfamily
3DDNA 5DCVA 3CYPB 3P10A 1H47A 1JJ2F 5IJ9A 1H48A 1XRGA 4X1YB 3JAKB 4G4XA 1R1MA 3P0ZA 1ONIA 1TVKB 2I6RA 4PWTA 1K73H 4TUYA 5FNVA 4B62A 5MN6A 4ZHQB 3PLAC 2RB9A 1SZQA 2HS0A 2IG8A 3KJKA 3HKEA 3TD4A 3N2KA 2HRUA 1OAPA 3CCEF 1W2BF 1Q8RA 3GTZA 3U0OA 2AMTA 2Q1YA 2JNBA 3T80A 3TD3A 1CN7A 4ZOLB 3RYFB 3CCMF 3K14A 2EWCA 1CLIA 3HKDB 5LOVA 3CCQF 3JAMM 3S0WA 3HJWC 2CWJA 3JATB 4BVSA 2KTUA 2ZODA 3CB2A 5CA0B 4X1IB 1KC8H 3RYHA 5LYJA 5HY4A 4TV9B 4C8GA 5LA6B 1VQ7F 4I4TB 1GO0A 2QI2A 3EORA 3VIUA 4DRXA 3J7AR 4RHAA 1X52A 5IJ9B 4BT4A 5IYZA 3WGJA 3IKEA 2Z01A 2PMPA 5FLXM 3C9TA 3QUWA 4I50A 2KG4A 3VOAA 2V9YA 1U43A 5C8YA 1YJWF 3ON1A 1X25A 5HWEA 3RYCB 4RQOA 5HP8A 3V7EA 4FFBA 4BT7A 3SIVA 3CYQA 4ZI7B 1KQSF 4C8IA 3LDTA 4O4HA 1VQVA 4O4LB 5JVDB 2VGNA 2FC3A 3JARB 5HY0A 1YJNF 4BY9D 5EIBD 4HNAA 3VOBA 4BVQA 3AGKA 2Z1TA 1YHQF 5CB4B 1NMUB 1TUBB 4IHJB 4WBNA 3MCQA 3F0EA 5LXTA 3ERNA 5AVMA 4BT3A 4ERHA 1W59A 1VQMF 1W42A 3FBAA 4LNUB 2HS4A 5HY1A 3OW2F 3HKCB 1YI2F 4BVTA 1YJ9F 5GIOC 1N8RH 1JFFA 4O4JB 4ZK7A 1OFUA 4X20B 4O2BA 4X3MA 3BYQA 3NMUC 1QVGF 3E22A 1SA0B 1X7OA 3ELCA 1VQ5F 3G71F 1QU9A 2KTVA 5KX5A 3NVKE 4FFBB 5LP6A 3I56F 3P4EA 5BMVB 2HQSC 1W5BA 3CC4F 3S03A 3S02A 1FNKA 1PF5A 2RHLA 3IMPA 4YJ3B 4B46A 2HP0A 1JD1A 4YJ2B 5J2UB 3CPWF 2GLZA 3CCRF 2UYPA 3C8LA 4ZHYB 3FD6A 1M90H 3O85A 3PAFA 3HKBB 1QVFF 3LWVC 3NVIB 3VO8A 5KMGB 4TV8B 1VH8A 4DXDA 1YGYA 5GAPK 1IV2A 5G4VC 3MBMA 2ALEA 5GONB 1VQLF 3LYBA 3ZO8A 5ITZB 3WGMA 1H7MA 2VGMA 5A2QM 1W5EA 4KWEA 4U39A 3V3TA 1QAHA 2FGYA 3E22B 3E1YA 3WPWA 4O2AB 2VAMA 3CCVF 5LP6B 3KHNA 3CCJF 2RHHA 1FFXA 5JCOC 1JN1A 4O4IA 3RA6A 5GINC 4LCKA 5HP7A 1U3LA 2LBXA 3DC2A 5IJ0A 1FNJA 1VHAA 3JASA 5GIPC 2BTUA 2NMUA 4ZHWA 3WPXA 3N4YA 3CG6A 1QD9A 3N4ZA 3MDOA 3ZP4A 1SDSA 5EIBC 4BT2A 1W55A 4EI8A 4EB6A 3F0DA 4TUYB 5FNVB 3K12A 5EO3A 2IQQA 5CA1A 2DYYA 1YQNA 1YIJF 1IV1A 3CMAF 3C9SA 3IEQA 3HKEB 5J2TA 3WXMB 3KJJA 3N2KB 1XBIA 1K8AH 4BVRA 3KE1A 4C82A 3CC7F 3VI6A 2CZWA 4G88A 3QTYA 2LBWA 5IT9M 3HWUA 3SIUA 3UT5A 4IIJA 1T0AA 3K0TA 3IKFA 3LFOA 2IAFA 3HTNA 5LOVB 3WJRA 2QTPA 3I7TA 2VAWA 1ZWZA 2YXZA 1Z5VA 3G4SF 1RQ7A 2CW4A 2GVIA 3RA5A 5EZYA 2KGWA 4R40B 5EWRA 1ODEA 3JALA 2LCAA 5JH7A 2Z1UA 3FFMA 1Q81H 1FFXB 2K1SA 4C4WC 4I55A 3N2GA 3RYHB 3RYIA 2DT4A 4M8IA 3V4DA 5LYJB 5IJ0B 3VCZA 3M4SA 2ZVZA 3I3FA 2LBTA 5JQGA 3JASB 2AIFA 5HY2A 1VQNF 1IV4A 4BT6A 5G4UC 3FPIA 4DRXB 2HX0A 5B8FA 3IR9A 1FSZA 1Z5WA 3JAKA 3OBYA 5IYZB 3F6MA 3MCAB 1TVKA 4C8EA 3JCMM 4NUTA 2CHSA 4I50B 3MQWA 4ZHQA 1GO1A 5MN4A 5C8YB 2OZBA 2RHOA 3WGLA 3M84A 4B45A 3HAXD 1XHOA 4O4HB 1J7HA 4U3JA 4ZOLA 1IV3A 4HNAB 5HXUA 4NWOB 1VQ6F 3LWQC 3B6NA 3HKDA 3ZOPA 3CC2F 2H8EA 3K2XA 1GX1A 2N48A 1VQKF 4WBNB 3JATA 2BTQB 3JALB 3CPQA 5FJ4C 4C81A 5LXTB 5CA0A 1KNKA 3G6EF 4X1IA 2GZLA 2HP3A 3RYIB 1VQ9F 2YYEA 4TV9A 5JQGB 1XV2A 5LA6A 3VYSC 4I4TA 3S0HA 1VQ4F 1VQOF 3J81M 3WGKA 3TD5A 1W40A 1Q86H 1JFFB 1U40A 2R751 3LWRC 3QHDA 4O2BB 1E7KA 2UZHA 3E20B 1NQ3A 4G4VA 3ZP7A 5KX5B 2Z1FA 1W57A 3RYCA 1VQ8F 2H8CA 3VYUC 1Q82H 5JCOA 3CCLF 1JY8A 4ZI7A 1W41A 3VYTC 1CK2A 5JVDA 4O4LA 4U3JB 3JARA 1IPAA 2HRYA 1VK3A 2HP0B 2G9IA 1T0KB 3R0PA 2R6R1 1DT9A 1KNJA 1NJIH 3S0YA 1DBFA 5CB4A 4F6RA 1M1KH 4X1KA 3CXCF 1TUBA 1UI9A 4IHJA 2VAPA 3OONA 2HS3A 1RA4A 4EI7A 3RE3A 3WJQA 1RLGA 2P6YA 2UYKA 3NK6A 3LWOC 1KD1H 3IEWA 3JAWA 3OBWA 2F9ZC 4LNUA 3F0GA 2CHTA 2PHNA 3HKCA 2B33A 2OHWA 2HVYD 1VQPF 2UYNA 3FD5A 4XCQA 2RHJA 4O4JA 3I55F 3VMFB 2OTLF 1W5AA 1W3EX 4NQ3A 4X20A 1Q7YH 2ZOVA 3C9UA 4G4ZA 2I6DA 2OTMA 5EYPA 1PXWA 1SA0A 3WJPA 1COMA 1RQ2A 3Q8HA 4EI9A 2W8BC 5BMVA 4O4IB 1X7PA 3S06A 4X3LA 4YJ3A 2H6LA 5MN5A 4E6EA 2BTOA 3C9RA 1YITF 4YJ2A 5J2UA 5EAZA 3J80M 2OTJF 4F6RB 4X1KB 5GANK 1K9MH 2QEXF 1UFYA 4X1YA 4BW0B 4EB6B 5EB0A 3HKBA 3GHZA 2ZVYA 3L7QA 5CA1B 5KMGA 2WALA 4G4WA 4TV8A 2VXYA 5EB1B 5J2TB 4TZZA 3JAWB 3F0FA 3LWPC 3KIZA 3D01A 5GONA 2QA4F 1S72F 5ITZA 2Q1XA 3RYFA 2UYNB 3UT5B 2UYJA 2Z1EA 4IIJB 4ZHVA 3CCSF 1GZ0A 2ZF8A 1U3PA 3CD6F 1W5FA 3V7QA 3LMEA 3ESJA 3WGNA 5EYPB 3VTIC 2CSLA 5EZYB 3D00A 2AIZP 3NK7A 2CVLA 2MQEA 3GYQA 3JVHA 4O2AA 5LP6C 5JH7B 4BT5A 1W581 3D54A 4I55B 2BO1A 3N2GB 3CMEF 5HXZA 3M1XA 3CCUF 4G4YA 4B5CA 2ZAUA 2L26A 1RLUA
chains in the Genus database with same CATH topology
2DT4A 4BT7A 4BT2A 2NMUA 4BT6A 3HWUA 4BT5A 2HX0A 1XV2A 2P6YA 4BT3A 3HTNA 2H6LA 4BT4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2DT4 A;  4BT7 A;  4BT2 A;  2NMU A;  4BT6 A;  3HWU A;  4BT5 A;  2HX0 A;  1XV2 A;  2P6Y A;  4BT3 A;  3HTN A;  2H6L A;  4BT4 A; 
#chains in the Genus database with same CATH topology
 3DDN A;  5DCV A;  3CYP B;  3P10 A;  1H47 A;  1JJ2 F;  5IJ9 A;  1H48 A;  1XRG A;  4X1Y B;  3JAK B;  4G4X A;  1R1M A;  3P0Z A;  1ONI A;  1TVK B;  2I6R A;  4PWT A;  1K73 H;  4TUY A;  5FNV A;  4B62 A;  5MN6 A;  4ZHQ B;  3PLA C;  2RB9 A;  1SZQ A;  2HS0 A;  2IG8 A;  3KJK A;  3HKE A;  3TD4 A;  3N2K A;  2HRU A;  1OAP A;  3CCE F;  1W2B F;  1Q8R A;  3GTZ A;  3U0O A;  2AMT A;  2Q1Y A;  2JNB A;  3T80 A;  3TD3 A;  1CN7 A;  4ZOL B;  3RYF B;  3CCM F;  3K14 A;  2EWC A;  1CLI A;  3HKD B;  5LOV A;  3CCQ F;  3JAM M;  3S0W A;  3HJW C;  2CWJ A;  3JAT B;  4BVS A;  2KTU A;  2ZOD A;  3CB2 A;  5CA0 B;  4X1I B;  1KC8 H;  3RYH A;  5LYJ A;  5HY4 A;  4TV9 B;  4C8G A;  5LA6 B;  1VQ7 F;  4I4T B;  1GO0 A;  2QI2 A;  3EOR A;  3VIU A;  4DRX A;  3J7A R;  4RHA A;  1X52 A;  5IJ9 B;  4BT4 A;  5IYZ A;  3WGJ A;  3IKE A;  2Z01 A;  2PMP A;  5FLX M;  3C9T A;  3QUW A;  4I50 A;  2KG4 A;  3VOA A;  2V9Y A;  1U43 A;  5C8Y A;  1YJW F;  3ON1 A;  1X25 A;  5HWE A;  3RYC B;  4RQO A;  5HP8 A;  3V7E A;  4FFB A;  4BT7 A;  3SIV A;  3CYQ A;  4ZI7 B;  1KQS F;  4C8I A;  3LDT A;  4O4H A;  1VQV A;  4O4L B;  5JVD B;  2VGN A;  2FC3 A;  3JAR B;  5HY0 A;  1YJN F;  4BY9 D;  5EIB D;  4HNA A;  3VOB A;  4BVQ A;  3AGK A;  2Z1T A;  1YHQ F;  5CB4 B;  1NMU B;  1TUB B;  4IHJ B;  4WBN A;  3MCQ A;  3F0E A;  5LXT A;  3ERN A;  5AVM A;  4BT3 A;  4ERH A;  1W59 A;  1VQM F;  1W42 A;  3FBA A;  4LNU B;  2HS4 A;  5HY1 A;  3OW2 F;  3HKC B;  1YI2 F;  4BVT A;  1YJ9 F;  5GIO C;  1N8R H;  1JFF A;  4O4J B;  4ZK7 A;  1OFU A;  4X20 B;  4O2B A;  4X3M A;  3BYQ A;  3NMU C;  1QVG F;  3E22 A;  1SA0 B;  1X7O A;  3ELC A;  1VQ5 F;  3G71 F;  1QU9 A;  2KTV A;  5KX5 A;  3NVK E;  4FFB B;  5LP6 A;  3I56 F;  3P4E A;  5BMV B;  2HQS C;  1W5B A;  3CC4 F;  3S03 A;  3S02 A;  1FNK A;  1PF5 A;  2RHL A;  3IMP A;  4YJ3 B;  4B46 A;  2HP0 A;  1JD1 A;  4YJ2 B;  5J2U B;  3CPW F;  2GLZ A;  3CCR F;  2UYP A;  3C8L A;  4ZHY B;  3FD6 A;  1M90 H;  3O85 A;  3PAF A;  3HKB B;  1QVF F;  3LWV C;  3NVI B;  3VO8 A;  5KMG B;  4TV8 B;  1VH8 A;  4DXD A;  1YGY A;  5GAP K;  1IV2 A;  5G4V C;  3MBM A;  2ALE A;  5GON B;  1VQL F;  3LYB A;  3ZO8 A;  5ITZ B;  3WGM A;  1H7M A;  2VGM A;  5A2Q M;  1W5E A;  4KWE A;  4U39 A;  3V3T A;  1QAH A;  2FGY A;  3E22 B;  3E1Y A;  3WPW A;  4O2A B;  2VAM A;  3CCV F;  5LP6 B;  3KHN A;  3CCJ F;  2RHH A;  1FFX A;  5JCO C;  1JN1 A;  4O4I A;  3RA6 A;  5GIN C;  4LCK A;  5HP7 A;  1U3L A;  2LBX A;  3DC2 A;  5IJ0 A;  1FNJ A;  1VHA A;  3JAS A;  5GIP C;  2BTU A;  2NMU A;  4ZHW A;  3WPX A;  3N4Y A;  3CG6 A;  1QD9 A;  3N4Z A;  3MDO A;  3ZP4 A;  1SDS A;  5EIB C;  4BT2 A;  1W55 A;  4EI8 A;  4EB6 A;  3F0D A;  4TUY B;  5FNV B;  3K12 A;  5EO3 A;  2IQQ A;  5CA1 A;  2DYY A;  1YQN A;  1YIJ F;  1IV1 A;  3CMA F;  3C9S A;  3IEQ A;  3HKE B;  5J2T A;  3WXM B;  3KJJ A;  3N2K B;  1XBI A;  1K8A H;  4BVR A;  3KE1 A;  4C82 A;  3CC7 F;  3VI6 A;  2CZW A;  4G88 A;  3QTY A;  2LBW A;  5IT9 M;  3HWU A;  3SIU A;  3UT5 A;  4IIJ A;  1T0A A;  3K0T A;  3IKF A;  3LFO A;  2IAF A;  3HTN A;  5LOV B;  3WJR A;  2QTP A;  3I7T A;  2VAW A;  1ZWZ A;  2YXZ A;  1Z5V A;  3G4S F;  1RQ7 A;  2CW4 A;  2GVI A;  3RA5 A;  5EZY A;  2KGW A;  4R40 B;  5EWR A;  1ODE A;  3JAL A;  2LCA A;  5JH7 A;  2Z1U A;  3FFM A;  1Q81 H;  1FFX B;  2K1S A;  4C4W C;  4I55 A;  3N2G A;  3RYH B;  3RYI A;  2DT4 A;  4M8I A;  3V4D A;  5LYJ B;  5IJ0 B;  3VCZ A;  3M4S A;  2ZVZ A;  3I3F A;  2LBT A;  5JQG A;  3JAS B;  2AIF A;  5HY2 A;  1VQN F;  1IV4 A;  4BT6 A;  5G4U C;  3FPI A;  4DRX B;  2HX0 A;  5B8F A;  3IR9 A;  1FSZ A;  1Z5W A;  3JAK A;  3OBY A;  5IYZ B;  3F6M A;  3MCA B;  1TVK A;  4C8E A;  3JCM M;  4NUT A;  2CHS A;  4I50 B;  3MQW A;  4ZHQ A;  1GO1 A;  5MN4 A;  5C8Y B;  2OZB A;  2RHO A;  3WGL A;  3M84 A;  4B45 A;  3HAX D;  1XHO A;  4O4H B;  1J7H A;  4U3J A;  4ZOL A;  1IV3 A;  4HNA B;  5HXU A;  4NWO B;  1VQ6 F;  3LWQ C;  3B6N A;  3HKD A;  3ZOP A;  3CC2 F;  2H8E A;  3K2X A;  1GX1 A;  2N48 A;  1VQK F;  4WBN B;  3JAT A;  2BTQ B;  3JAL B;  3CPQ A;  5FJ4 C;  4C81 A;  5LXT B;  5CA0 A;  1KNK A;  3G6E F;  4X1I A;  2GZL A;  2HP3 A;  3RYI B;  1VQ9 F;  2YYE A;  4TV9 A;  5JQG B;  1XV2 A;  5LA6 A;  3VYS C;  4I4T A;  3S0H A;  1VQ4 F;  1VQO F;  3J81 M;  3WGK A;  3TD5 A;  1W40 A;  1Q86 H;  1JFF B;  1U40 A;  2R75 1;  3LWR C;  3QHD A;  4O2B B;  1E7K A;  2UZH A;  3E20 B;  1NQ3 A;  4G4V A;  3ZP7 A;  5KX5 B;  2Z1F A;  1W57 A;  3RYC A;  1VQ8 F;  2H8C A;  3VYU C;  1Q82 H;  5JCO A;  3CCL F;  1JY8 A;  4ZI7 A;  1W41 A;  3VYT C;  1CK2 A;  5JVD A;  4O4L A;  4U3J B;  3JAR A;  1IPA A;  2HRY A;  1VK3 A;  2HP0 B;  2G9I A;  1T0K B;  3R0P A;  2R6R 1;  1DT9 A;  1KNJ A;  1NJI H;  3S0Y A;  1DBF A;  5CB4 A;  4F6R A;  1M1K H;  4X1K A;  3CXC F;  1TUB A;  1UI9 A;  4IHJ A;  2VAP A;  3OON A;  2HS3 A;  1RA4 A;  4EI7 A;  3RE3 A;  3WJQ A;  1RLG A;  2P6Y A;  2UYK A;  3NK6 A;  3LWO C;  1KD1 H;  3IEW A;  3JAW A;  3OBW A;  2F9Z C;  4LNU A;  3F0G A;  2CHT A;  2PHN A;  3HKC A;  2B33 A;  2OHW A;  2HVY D;  1VQP F;  2UYN A;  3FD5 A;  4XCQ A;  2RHJ A;  4O4J A;  3I55 F;  3VMF B;  2OTL F;  1W5A A;  1W3E X;  4NQ3 A;  4X20 A;  1Q7Y H;  2ZOV A;  3C9U A;  4G4Z A;  2I6D A;  2OTM A;  5EYP A;  1PXW A;  1SA0 A;  3WJP A;  1COM A;  1RQ2 A;  3Q8H A;  4EI9 A;  2W8B C;  5BMV A;  4O4I B;  1X7P A;  3S06 A;  4X3L A;  4YJ3 A;  2H6L A;  5MN5 A;  4E6E A;  2BTO A;  3C9R A;  1YIT F;  4YJ2 A;  5J2U A;  5EAZ A;  3J80 M;  2OTJ F;  4F6R B;  4X1K B;  5GAN K;  1K9M H;  2QEX F;  1UFY A;  4X1Y A;  4BW0 B;  4EB6 B;  5EB0 A;  3HKB A;  3GHZ A;  2ZVY A;  3L7Q A;  5CA1 B;  5KMG A;  2WAL A;  4G4W A;  4TV8 A;  2VXY A;  5EB1 B;  5J2T B;  4TZZ A;  3JAW B;  3F0F A;  3LWP C;  3KIZ A;  3D01 A;  5GON A;  2QA4 F;  1S72 F;  5ITZ A;  2Q1X A;  3RYF A;  2UYN B;  3UT5 B;  2UYJ A;  2Z1E A;  4IIJ B;  4ZHV A;  3CCS F;  1GZ0 A;  2ZF8 A;  1U3P A;  3CD6 F;  1W5F A;  3V7Q A;  3LME A;  3ESJ A;  3WGN A;  5EYP B;  3VTI C;  2CSL A;  5EZY B;  3D00 A;  2AIZ P;  3NK7 A;  2CVL A;  2MQE A;  3GYQ A;  3JVH A;  4O2A A;  5LP6 C;  5JH7 B;  4BT5 A;  1W58 1;  3D54 A;  4I55 B;  2BO1 A;  3N2G B;  3CME F;  5HXZ A;  3M1X A;  3CCU F;  4G4Y A;  4B5C A;  2ZAU A;  2L26 A;  1RLU A; 
#chains in the Genus database with same CATH homology
 2DT4 A;  4BT7 A;  4BT2 A;  2NMU A;  4BT6 A;  3HWU A;  4BT5 A;  2HX0 A;  1XV2 A;  2P6Y A;  4BT3 A;  3HTN A;  2H6L A;  4BT4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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