2H6LA

X-ray crystal structure of the metal-containing protein af0104 from archaeoglobus fulgidus. northeast structural genomics consortium target gr103.
Total Genus 28
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
28
sequence length
140
structure length
140
Chain Sequence
MKVFEFEVGKGFLLRLDYGKDLVRQIEEFLEEKGIHAAHISAIGAVRSAVIGYYDQEKKEYVKKELMEPLEILSLSGNVSMKDSKPFCHIHVLLGKDGEVYGGHLFSAEVFACEVFVLPLSGEAPERAFDEQTGLFLWLE
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural genomics, unknown function
source organism Archaeoglobus fulgidus
publication title Three dimensional structure of the hypothetical protein AF0104 at the 2.0 A resolution.
rcsb
molecule keywords Hypothetical protein
total genus 28
structure length 140
sequence length 140
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2006-05-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03479 DUF296 Plants and Prokaryotes Conserved (PCC) domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1330.80 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30; Chain: A; Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 2h6lA00
2H6LA 4BT4A 2DT4A 4BT7A 2NMUA 4BT3A 4BT5A 2P6YA 2HX0A 1XV2A 3HWUA 4BT6A 3HTNA 4BT2A
chains in the Genus database with same CATH superfamily
3IKEA 3G71F 3ESJA 4BVQA 3HKBB 3OONA 3I3FA 4I50A 1TUBB 3JAWA 1Q81H 1KNKA 1VQOF 3I7TA 3HKCA 1VQMF 5MN5A 5LXTB 3NK6A 4XCQA 3UT5A 1VQ9F 3S0WA 5GIPC 4BVSA 1Q8RA 2CHTA 4B5CA 2L26A 2CVLA 1FFXA 3WGNA 2KTUA 2PMPA 5JQGB 1W3EX 5LP6B 1OFUA 3RE3A 3K0TA 2ZODA 4ZOLB 2BO1A 4BVTA 2HVYD 5JVDA 1OAPA 3ZO8A 4C82A 3N2GA 4NQ3A 4BVRA 3RA5A 1YGYA 3CCUF 1Z5WA 4IIJA 4KWEA 3WGMA 4HNAB 1VK3A 4X20B 1K8AH 4X1YB 4O2AB 1GO0A 4U39A 5KMGB 3QTYA 1GZ0A 2Q1YA 1FSZA 4E6EA 3HTNA 2N48A 1FNKA 5JH7A 3JALB 3LDTA 3U0OA 3P10A 1JFFB 1TVKA 4YJ3B 5EZYA 5IJ0A 4NWOB 5EYPB 3HJWC 5LA6A 3CCJF 3WGJA 1FNJA 1PF5A 3LFOA 4ERHA 4F6RB 1YHQF 4WBNB 3JAMM 2GVIA 3NVIB 3N4YA 5CA0A 1DBFA 4U3JA 1U43A 3LWPC 4M8IA 1VQVA 2VGMA 1U3PA 3K14A 5J2TB 3LWOC 1ONIA 5FNVA 2PHNA 1R1MA 1VQLF 3VCZA 4ZI7A 2W8BC 4X1IA 4B45A 1VQPF 3HKEB 4BW0B 3TD3A 4EI8A 1GO1A 3VYTC 1W59A 1S72F 3HAXD 4LNUA 2V9YA 4O2BB 1Q86H 3JASB 3J80M 3IMPA 1VQ5F 3LWRC 3E20B 1T0KB 4C81A 2HS4A 5KX5B 3DC2A 1NQ3A 1IPAA 5CB4A 3I55F 1QVFF 1YQNA 2NMUA 3ZP7A 3GTZA 2UZHA 2ALEA 2R6R1 5EIBC 3Q8HA 4G4XA 1W55A 4I55B 1QVGF 4O4LA 3CCLF 1UFYA 3WJPA 3FBAA 3HKBA 3IR9A 4X3MA 2DT4A 3C9UA 1TUBA 2HP0B 2MQEA 4TUYB 2QTPA 3IKFA 1CLIA 4BT6A 1KD1H 3K2XA 4X1KB 5LXTA 4C8EA 3S0HA 1W42A 5JCOC 3RYCB 2QI2A 5EB0A 1H7MA 3JARB 2ZAUA 3CB2A 3GYQA 2G9IA 4DXDA 5JQGA 4LCKA 3V4DA 3D00A 4I4TB 5LP6A 5GINC 2HRUA 5HY1A 1VQKF 4ZOLA 2RHOA 5IJ9B 2HS0A 3FPIA 1Z5VA 1K9MH 4C4WC 1H47A 1VQ7F 2OTLF 3LYBA 1JJ2F 2UYNB 4HNAA 4O4HB 3V7QA 4BT7A 2AMTA 4X20A 3HWUA 4X1YA 4O2AA 3S0YA 5KMGA 1X7PA 3VTIC 2KGWA 2UYPA 3M84A 3CXCF 4O4JB 3CC4F 3JALA 5G4UC 3CG6A 5EAZA 1XRGA 5ITZB 2RB9A 1JFFA 4YJ3A 3VMFB 1N8RH 2KTVA 5EYPA 1U40A 2IG8A 1CN7A 2Z01A 4F6RA 3KIZA 4WBNA 4ZK7A 5EWRA 3VO8A 3GHZA 5GANK 1Q7YH 1YJ9F 1IV1A 3HKDB 2YXZA 5J2TA 1KC8H 3OW2F 1SA0B 5LOVB 2Z1FA 4G88A 5MN4A 5J2UB 5GONB 4FFBB 2RHHA 2ZOVA 1RQ2A 4RHAA 5HWEA 3HKEA 2GZLA 3CYQA 4ZHQB 2AIZP 5HP8A 4G4WA 4O2BA 3JASA 1W5BA 5DCVA 3T80A 2JNBA 3N2KB 2HP3A 2OTMA 2QEXF 2H6LA 3CCMF 3CC7F 1U3LA 5A2QM 5IYZB 1H48A 5KX5A 3PAFA 3TD5A 5LYJB 1W57A 2OZBA 2HX0A 1XBIA 5EIBD 3V3TA 4BT4A 4I55A 3RYFB 4IHJB 3CCEF 1YI2F 1NJIH 4BT2A 3EORA 4BT3A 2HQSC 1X25A 5C8YB 3LMEA 2HP0A 1W41A 4TUYA 2BTQB 4ZHVA 3DDNA 4DRXB 3WPWA 3CPQA 3CPWF 3BYQA 4RQOA 2LBXA 4X1KA 1Q82H 2I6DA 4PWTA 3E1YA 3C9TA 3CC2F 1M1KH 2FGYA 2P6YA 3F0FA 3RYCA 3F6MA 5G4VC 4EB6B 3JARA 3JAKB 2UYJA 4I4TA 2GLZA 3OBWA 3RYHB 5IJ9A 5BMVB 5FJ4C 3VOAA 3OBYA 4BT5A 2K1SA 1ZWZA 4YJ2B 1VQ6F 2IQQA 1GX1A 1VH8A 4C8IA 4EI7A 2UYKA 2ZF8A 2VXYA 2Q1XA 3D01A 1CK2A 2UYNA 4O4HA 1XV2A 3F0GA 3L7QA 3M4SA 3ELCA 3PLAC 2CHSA 3C9SA 3WJQA 1YIJF 3TD4A 4C8GA 1K73H 3JATB 3LWVC 1IV4A 3ZP4A 4O4JA 5HY0A 2CZWA 3RYIB 3KJJA 3VIUA 3WPXA 3SIVA 4G4ZA 1QU9A 5ITZA 2CW4A 3P0ZA 3P4EA 3KJKA 2YYEA 1JD1A 2Z1UA 5EO3A 1QD9A 1W40A 5JCOA 2DYYA 3S06A 2QA4F 2I6RA 1X7OA 1PXWA 3CYPB 2HS3A 4O4IB 3IEQA 2OHWA 3K12A 1IV3A 3WGLA 1YJWF 3E22B 3D54A 5CA1B 2RHLA 5HY2A 2KG4A 2FC3A 3HKDA 3F0DA 3FFMA 1W5EA 1SA0A 2LBTA 5LOVA 1W581 3C9RA 5J2UA 2CWJA 3MDOA 3N4ZA 4FFBA 5GONA 3MBMA 4I50B 1JN1A 3WJRA 3SIUA 1JY8A 3VYUC 3JAWB 1KNJA 3FD6A 4ZHQA 3CMEF 4TZZA 3HKCB 4TV8A 3UT5B 3NVKE 2RHJA 2VAMA 3CD6F 1RA4A 3N2KA 1UI9A 3JVHA 3F0EA 1FFXB 5IYZA 3KE1A 2Z1EA 2OTJF 5LYJA 1COMA 5JVDB 1RLGA 3WGKA 3IEWA 2WALA 3N2GB 4R40B 3CMAF 1X52A 1M90H 3CCSF 5IT9M 4TV8B 3VI6A 3VOBA 3RA6A 3RYFA 2Z1TA 4IHJA 3J81M 4ZHWA 4IIJB 4X3LA 5HXUA 2ZVYA 3NK7A 1DT9A 1W2BF 2CSLA 3C8LA 5C8YA 3M1XA 3J7AR 3MCQA 5B8FA 1VQ4F 4DRXA 3V7EA 1YITF 5JH7B 2VAPA 2BTUA 1NMUB 1TVKB 1VQ8F 2F9ZC 3VYSC 2VAWA 5EZYB 4EB6A 5IJ0B 3JAKA 2H8CA 4G4VA 2VGNA 1RLUA 5AVMA 5LA6B 5HY4A 3KHNA 3RYHA 4B62A 1VHAA 4NUTA 2B33A 5BMVA 1SZQA 2IAFA 1XHOA 4YJ2A 1W5AA 5CA0B 3CCVF 3R0PA 4U3JB 3FD5A 5FLXM 2R751 4B46A 3MCAB 5HXZA 3G6EF 4TV9A 5FNVB 2EWCA 3NMUC 3QUWA 1RQ7A 2AIFA 2LBWA 5MN6A 1YJNF 4ZI7B 3JATA 3CCQF 4X1IB 3RYIA 2BTOA 3G4SF 3ERNA 4LNUB 1IV2A 5GIOC 1VQNF 3MQWA 5GAPK 5EB1B 3JCMM 1QAHA 5LP6C 3LWQC 2ZVZA 3WXMB 4TV9B 4G4YA 2LCAA 4ZHYB 4O4IA 3S02A 4BY9D 1W5FA 1ODEA 3CCRF 3QHDA 2HRYA 1KQSF 1E7KA 3E22A 3ON1A 5CB4B 1SDSA 1T0AA 3B6NA 1J7HA 5CA1A 3AGKA 5HP7A 3I56F 3ZOPA 4EI9A 2H8EA 3S03A 3O85A 4O4LB
chains in the Genus database with same CATH topology
2H6LA 4BT4A 2DT4A 4BT7A 2NMUA 4BT3A 4BT5A 2P6YA 2HX0A 1XV2A 3HWUA 4BT6A 3HTNA 4BT2A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2H6L A;  4BT4 A;  2DT4 A;  4BT7 A;  2NMU A;  4BT3 A;  4BT5 A;  2P6Y A;  2HX0 A;  1XV2 A;  3HWU A;  4BT6 A;  3HTN A;  4BT2 A; 
#chains in the Genus database with same CATH topology
 3IKE A;  3G71 F;  3ESJ A;  4BVQ A;  3HKB B;  3OON A;  3I3F A;  4I50 A;  1TUB B;  3JAW A;  1Q81 H;  1KNK A;  1VQO F;  3I7T A;  3HKC A;  1VQM F;  5MN5 A;  5LXT B;  3NK6 A;  4XCQ A;  3UT5 A;  1VQ9 F;  3S0W A;  5GIP C;  4BVS A;  1Q8R A;  2CHT A;  4B5C A;  2L26 A;  2CVL A;  1FFX A;  3WGN A;  2KTU A;  2PMP A;  5JQG B;  1W3E X;  5LP6 B;  1OFU A;  3RE3 A;  3K0T A;  2ZOD A;  4ZOL B;  2BO1 A;  4BVT A;  2HVY D;  5JVD A;  1OAP A;  3ZO8 A;  4C82 A;  3N2G A;  4NQ3 A;  4BVR A;  3RA5 A;  1YGY A;  3CCU F;  1Z5W A;  4IIJ A;  4KWE A;  3WGM A;  4HNA B;  1VK3 A;  4X20 B;  1K8A H;  4X1Y B;  4O2A B;  1GO0 A;  4U39 A;  5KMG B;  3QTY A;  1GZ0 A;  2Q1Y A;  1FSZ A;  4E6E A;  3HTN A;  2N48 A;  1FNK A;  5JH7 A;  3JAL B;  3LDT A;  3U0O A;  3P10 A;  1JFF B;  1TVK A;  4YJ3 B;  5EZY A;  5IJ0 A;  4NWO B;  5EYP B;  3HJW C;  5LA6 A;  3CCJ F;  3WGJ A;  1FNJ A;  1PF5 A;  3LFO A;  4ERH A;  4F6R B;  1YHQ F;  4WBN B;  3JAM M;  2GVI A;  3NVI B;  3N4Y A;  5CA0 A;  1DBF A;  4U3J A;  1U43 A;  3LWP C;  4M8I A;  1VQV A;  2VGM A;  1U3P A;  3K14 A;  5J2T B;  3LWO C;  1ONI A;  5FNV A;  2PHN A;  1R1M A;  1VQL F;  3VCZ A;  4ZI7 A;  2W8B C;  4X1I A;  4B45 A;  1VQP F;  3HKE B;  4BW0 B;  3TD3 A;  4EI8 A;  1GO1 A;  3VYT C;  1W59 A;  1S72 F;  3HAX D;  4LNU A;  2V9Y A;  4O2B B;  1Q86 H;  3JAS B;  3J80 M;  3IMP A;  1VQ5 F;  3LWR C;  3E20 B;  1T0K B;  4C81 A;  2HS4 A;  5KX5 B;  3DC2 A;  1NQ3 A;  1IPA A;  5CB4 A;  3I55 F;  1QVF F;  1YQN A;  2NMU A;  3ZP7 A;  3GTZ A;  2UZH A;  2ALE A;  2R6R 1;  5EIB C;  3Q8H A;  4G4X A;  1W55 A;  4I55 B;  1QVG F;  4O4L A;  3CCL F;  1UFY A;  3WJP A;  3FBA A;  3HKB A;  3IR9 A;  4X3M A;  2DT4 A;  3C9U A;  1TUB A;  2HP0 B;  2MQE A;  4TUY B;  2QTP A;  3IKF A;  1CLI A;  4BT6 A;  1KD1 H;  3K2X A;  4X1K B;  5LXT A;  4C8E A;  3S0H A;  1W42 A;  5JCO C;  3RYC B;  2QI2 A;  5EB0 A;  1H7M A;  3JAR B;  2ZAU A;  3CB2 A;  3GYQ A;  2G9I A;  4DXD A;  5JQG A;  4LCK A;  3V4D A;  3D00 A;  4I4T B;  5LP6 A;  5GIN C;  2HRU A;  5HY1 A;  1VQK F;  4ZOL A;  2RHO A;  5IJ9 B;  2HS0 A;  3FPI A;  1Z5V A;  1K9M H;  4C4W C;  1H47 A;  1VQ7 F;  2OTL F;  3LYB A;  1JJ2 F;  2UYN B;  4HNA A;  4O4H B;  3V7Q A;  4BT7 A;  2AMT A;  4X20 A;  3HWU A;  4X1Y A;  4O2A A;  3S0Y A;  5KMG A;  1X7P A;  3VTI C;  2KGW A;  2UYP A;  3M84 A;  3CXC F;  4O4J B;  3CC4 F;  3JAL A;  5G4U C;  3CG6 A;  5EAZ A;  1XRG A;  5ITZ B;  2RB9 A;  1JFF A;  4YJ3 A;  3VMF B;  1N8R H;  2KTV A;  5EYP A;  1U40 A;  2IG8 A;  1CN7 A;  2Z01 A;  4F6R A;  3KIZ A;  4WBN A;  4ZK7 A;  5EWR A;  3VO8 A;  3GHZ A;  5GAN K;  1Q7Y H;  1YJ9 F;  1IV1 A;  3HKD B;  2YXZ A;  5J2T A;  1KC8 H;  3OW2 F;  1SA0 B;  5LOV B;  2Z1F A;  4G88 A;  5MN4 A;  5J2U B;  5GON B;  4FFB B;  2RHH A;  2ZOV A;  1RQ2 A;  4RHA A;  5HWE A;  3HKE A;  2GZL A;  3CYQ A;  4ZHQ B;  2AIZ P;  5HP8 A;  4G4W A;  4O2B A;  3JAS A;  1W5B A;  5DCV A;  3T80 A;  2JNB A;  3N2K B;  2HP3 A;  2OTM A;  2QEX F;  2H6L A;  3CCM F;  3CC7 F;  1U3L A;  5A2Q M;  5IYZ B;  1H48 A;  5KX5 A;  3PAF A;  3TD5 A;  5LYJ B;  1W57 A;  2OZB A;  2HX0 A;  1XBI A;  5EIB D;  3V3T A;  4BT4 A;  4I55 A;  3RYF B;  4IHJ B;  3CCE F;  1YI2 F;  1NJI H;  4BT2 A;  3EOR A;  4BT3 A;  2HQS C;  1X25 A;  5C8Y B;  3LME A;  2HP0 A;  1W41 A;  4TUY A;  2BTQ B;  4ZHV A;  3DDN A;  4DRX B;  3WPW A;  3CPQ A;  3CPW F;  3BYQ A;  4RQO A;  2LBX A;  4X1K A;  1Q82 H;  2I6D A;  4PWT A;  3E1Y A;  3C9T A;  3CC2 F;  1M1K H;  2FGY A;  2P6Y A;  3F0F A;  3RYC A;  3F6M A;  5G4V C;  4EB6 B;  3JAR A;  3JAK B;  2UYJ A;  4I4T A;  2GLZ A;  3OBW A;  3RYH B;  5IJ9 A;  5BMV B;  5FJ4 C;  3VOA A;  3OBY A;  4BT5 A;  2K1S A;  1ZWZ A;  4YJ2 B;  1VQ6 F;  2IQQ A;  1GX1 A;  1VH8 A;  4C8I A;  4EI7 A;  2UYK A;  2ZF8 A;  2VXY A;  2Q1X A;  3D01 A;  1CK2 A;  2UYN A;  4O4H A;  1XV2 A;  3F0G A;  3L7Q A;  3M4S A;  3ELC A;  3PLA C;  2CHS A;  3C9S A;  3WJQ A;  1YIJ F;  3TD4 A;  4C8G A;  1K73 H;  3JAT B;  3LWV C;  1IV4 A;  3ZP4 A;  4O4J A;  5HY0 A;  2CZW A;  3RYI B;  3KJJ A;  3VIU A;  3WPX A;  3SIV A;  4G4Z A;  1QU9 A;  5ITZ A;  2CW4 A;  3P0Z A;  3P4E A;  3KJK A;  2YYE A;  1JD1 A;  2Z1U A;  5EO3 A;  1QD9 A;  1W40 A;  5JCO A;  2DYY A;  3S06 A;  2QA4 F;  2I6R A;  1X7O A;  1PXW A;  3CYP B;  2HS3 A;  4O4I B;  3IEQ A;  2OHW A;  3K12 A;  1IV3 A;  3WGL A;  1YJW F;  3E22 B;  3D54 A;  5CA1 B;  2RHL A;  5HY2 A;  2KG4 A;  2FC3 A;  3HKD A;  3F0D A;  3FFM A;  1W5E A;  1SA0 A;  2LBT A;  5LOV A;  1W58 1;  3C9R A;  5J2U A;  2CWJ A;  3MDO A;  3N4Z A;  4FFB A;  5GON A;  3MBM A;  4I50 B;  1JN1 A;  3WJR A;  3SIU A;  1JY8 A;  3VYU C;  3JAW B;  1KNJ A;  3FD6 A;  4ZHQ A;  3CME F;  4TZZ A;  3HKC B;  4TV8 A;  3UT5 B;  3NVK E;  2RHJ A;  2VAM A;  3CD6 F;  1RA4 A;  3N2K A;  1UI9 A;  3JVH A;  3F0E A;  1FFX B;  5IYZ A;  3KE1 A;  2Z1E A;  2OTJ F;  5LYJ A;  1COM A;  5JVD B;  1RLG A;  3WGK A;  3IEW A;  2WAL A;  3N2G B;  4R40 B;  3CMA F;  1X52 A;  1M90 H;  3CCS F;  5IT9 M;  4TV8 B;  3VI6 A;  3VOB A;  3RA6 A;  3RYF A;  2Z1T A;  4IHJ A;  3J81 M;  4ZHW A;  4IIJ B;  4X3L A;  5HXU A;  2ZVY A;  3NK7 A;  1DT9 A;  1W2B F;  2CSL A;  3C8L A;  5C8Y A;  3M1X A;  3J7A R;  3MCQ A;  5B8F A;  1VQ4 F;  4DRX A;  3V7E A;  1YIT F;  5JH7 B;  2VAP A;  2BTU A;  1NMU B;  1TVK B;  1VQ8 F;  2F9Z C;  3VYS C;  2VAW A;  5EZY B;  4EB6 A;  5IJ0 B;  3JAK A;  2H8C A;  4G4V A;  2VGN A;  1RLU A;  5AVM A;  5LA6 B;  5HY4 A;  3KHN A;  3RYH A;  4B62 A;  1VHA A;  4NUT A;  2B33 A;  5BMV A;  1SZQ A;  2IAF A;  1XHO A;  4YJ2 A;  1W5A A;  5CA0 B;  3CCV F;  3R0P A;  4U3J B;  3FD5 A;  5FLX M;  2R75 1;  4B46 A;  3MCA B;  5HXZ A;  3G6E F;  4TV9 A;  5FNV B;  2EWC A;  3NMU C;  3QUW A;  1RQ7 A;  2AIF A;  2LBW A;  5MN6 A;  1YJN F;  4ZI7 B;  3JAT A;  3CCQ F;  4X1I B;  3RYI A;  2BTO A;  3G4S F;  3ERN A;  4LNU B;  1IV2 A;  5GIO C;  1VQN F;  3MQW A;  5GAP K;  5EB1 B;  3JCM M;  1QAH A;  5LP6 C;  3LWQ C;  2ZVZ A;  3WXM B;  4TV9 B;  4G4Y A;  2LCA A;  4ZHY B;  4O4I A;  3S02 A;  4BY9 D;  1W5F A;  1ODE A;  3CCR F;  3QHD A;  2HRY A;  1KQS F;  1E7K A;  3E22 A;  3ON1 A;  5CB4 B;  1SDS A;  1T0A A;  3B6N A;  1J7H A;  5CA1 A;  3AGK A;  5HP7 A;  3I56 F;  3ZOP A;  4EI9 A;  2H8E A;  3S03 A;  3O85 A;  4O4L B; 
#chains in the Genus database with same CATH homology
 2H6L A;  4BT4 A;  2DT4 A;  4BT7 A;  2NMU A;  4BT3 A;  4BT5 A;  2P6Y A;  2HX0 A;  1XV2 A;  3HWU A;  4BT6 A;  3HTN A;  4BT2 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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