2H8EA

Structure rusa d70n
Total Genus 35

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
35
sequence length
120
structure length
120
Chain Sequence
MNTYSITLPWPPSNNRYYRHNRGRTHVSAEGQAYRDNVARIIKNAMLDIGLAMPVKIRIECHMPDRRRRNLDNLQKAAFDALTKAGFWLDDAQVVDYRVVKMPVTKGGRLELTITEMGNE

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYS6 (109-116)AH2 (29-45)S1 (3-9)AH1 (14-17)S2 (18-21)AH3 (71-85)3H1 (91-93)S4 (55-63)TII1 (105-108)S5 (94-104)S3 (24-27)TIV2 (86-89)Updating...
connected with : NaN
molecule tags Hydrolase
source organism Escherichia coli
publication title RusA Holliday junction resolvase: DNA complex structure--insights into selectivity and specificity.
pubmed doi rcsb
molecule keywords Crossover junction endodeoxyribonuclease rusA
total genus 35
structure length 120
sequence length 120
ec nomenclature ec 3.1.22.4: Crossover junction endodeoxyribonuclease.
pdb deposition date 2006-06-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF05866 RusA Endodeoxyribonuclease RusA
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1330.70 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30; Chain: A; Holliday junction resolvase RusA 2h8eA00
2H8EA 2H8CA 1Q8RA
chains in the Genus database with same CATH superfamily
5EYPA 5JVDA 2KTVA 2CW4A 3CC7F 2K1SA 3F0GA 1E7KA 1SA0A 4HNAB 4ZHWA 4X1IB 3LYBA 3JARB 5LXTB 1YJ9F 3J80M 5LP6B 4G4WA 3RYIB 1IV1A 5EZYB 4BT5A 5JQGB 3MCAB 3VI6A 1R1MA 1XBIA 3MQWA 2UYNA 2L26A 1VQ6F 3WJQA 1DT9A 3IEWA 3RYHA 4TV8A 4B45A 4DRXB 1OAPA 5IYZA 4G4ZA 4IHJB 4TUYB 4O4HA 3KE1A 3VCZA 3HJWC 2LCAA 3B6NA 4E6EA 1KD1H 4WBNA 3C9RA 1VQ5F 2ZAUA 4M8IA 2HS4A 4R40B 1Q8RA 1YHQF 3DDNA 5MN5A 3S06A 3P0ZA 1QU9A 4G4YA 3TD4A 5EB0A 3JATB 1YJWF 1W5AA 3E20B 2HP0B 2VAMA 3JAMM 4BT3A 5BMVA 2AIZP 3OONA 1W42A 3FBAA 5HWEA 5JCOC 3F6MA 2GVIA 1SZQA 3UT5B 1VQ8F 5LA6A 2UYKA 2KGWA 3CB2A 4ZHVA 1Q86H 3VOBA 5CA0B 2DT4A 3R0PA 4O4LB 1VH8A 2NMUA 2H8CA 1SA0B 1W57A 5JCOA 2V9YA 1QD9A 2Z1EA 2I6DA 4ZHQB 3IEQA 1SDSA 2UYNB 1KC8H 1VK3A 1T0KB 1FSZA 3RYHB 1ONIA 4O2BB 4HNAA 4X1IA 3JARA 3KIZA 5LOVA 3ON1A 5LP6A 3RYIA 1KQSF 5MN6A 2IG8A 2F9ZC 5JQGA 3S0YA 3ZP7A 3C9UA 1X52A 1YITF 3LWRC 1W41A 4EI9A 2OTMA 5G4VC 1VQNF 4C8IA 4TZZA 2HRYA 4TUYA 1VQPF 5EB1B 2OHWA 3OBYA 4FFBB 1JN1A 3ELCA 4EI8A 1VQLF 2QEXF 3CC4F 3N4ZA 4NUTA 3CCSF 1NJIH 5BMVB 3LMEA 4I50A 3LWVC 2Q1XA 5C8YB 1DBFA 5HXUA 2ZOVA 3ESJA 1M1KH 1W59A 4I4TB 1GZ0A 3S0WA 2LBWA 3KHNA 3FFMA 4BT4A 4BY9D 1FNJA 1Z5WA 5FNVB 2Q1YA 1U40A 2RHLA 3JATA 4O2AB 5KX5B 2HP0A 4ERHA 2OTJF 2FC3A 3FD6A 5LYJB 3P4EA 5ITZB 3UT5A 5GIPC 3CCMF 3CCLF 3SIUA 3HKDA 2KTUA 4ZI7B 5CA0A 2Z1FA 4O4LA 3HKBB 3QUWA 1W5BA 2CHSA 5LOVB 3WXMB 2RHOA 2HX0A 4ZHQA 3K12A 3DC2A 2JNBA 2UYPA 3VMFB 2Z1UA 3E1YA 3T80A 3D54A 1K8AH 3HKEB 2WALA 2LBXA 3JCMM 1VQOF 4O2BA 3CCRF 4U3JB 3V3TA 2R751 4C81A 2CSLA 3TD5A 5IT9M 1Z5VA 2HS3A 1RQ2A 3K0TA 1VQKF 3U0OA 1YJNF 2HS0A 2HQSC 1NMUB 4EI7A 1OFUA 3LFOA 3E22A 5J2UB 4O4IB 3F0DA 1W5FA 4I50B 5CB4B 1JFFA 2VAWA 5EAZA 1S72F 4LCKA 1FNKA 3WJRA 3L7QA 3J7AR 3S02A 3S0HA 3CMEF 2I6RA 3G4SF 3CCEF 2VXYA 1IPAA 4FFBA 2RB9A 1YI2F 5FJ4C 4G4XA 1KNJA 1VQ7F 2HVYD 3FPIA 2HRUA 3RA5A 5C8YA 4G88A 3C9TA 5EIBD 4BVQA 3C9SA 3VIUA 2RHHA 3HKDB 3JASB 4I4TA 2ZVZA 1RLUA 1H7MA 3WGNA 5KMGB 3GHZA 5FNVA 2CVLA 1GO1A 3G71F 3F0EA 1COMA 4O2AA 5KX5A 2GZLA 1GX1A 3NK6A 3CG6A 4C8GA 5LYJA 5HP7A 1U3LA 1H48A 2ALEA 3RYCB 1X7OA 2ZVYA 2UZHA 5ITZA 5LP6C 1W40A 3VOAA 4ZI7A 5MN4A 3QTYA 4X1YB 4LNUA 2KG4A 3HKBA 3WPWA 3WGMA 2UYJA 5CA1A 5HY4A 3WGJA 3CCJF 3JAWB 3HAXD 3E22B 3I3FA 5GAPK 2Z01A 2YYEA 1ZWZA 4O4JB 2CHTA 5HP8A 1JFFB 3HKEA 3CC2F 4U3JA 5AVMA 5HXZA 2LBTA 1QVFF 1KNKA 4U39A 5J2TB 3FD5A 5J2UA 2GLZA 3J81M 1Q7YH 4O4IA 1X25A 1IV3A 2B33A 2YXZA 2PHNA 3N4YA 5CB4A 3CYQA 1Q82H 1M90H 1JD1A 3WGKA 2EWCA 2OTLF 5IJ9B 3CCUF 5GIOC 4F6RB 3LDTA 3TD3A 3VTIC 1IV4A 1TUBB 5EO3A 1PXWA 1W3EX 2AIFA 2IQQA 2RHJA 4X1KB 2N48A 2W8BC 3JAKB 3NK7A 3WPXA 3V7EA 1YQNA 1XHOA 3I7TA 1FFXA 3IKFA 3M1XA 3JASA 5KMGA 3RYFB 4LNUB 2IAFA 2CZWA 2BTQB 2CWJA 2H6LA 1T0AA 3M84A 5CA1B 1VQ9F 4X20B 3S03A 3HWUA 4KWEA 3RYCA 3OW2F 2R6R1 2QA4F 1VHAA 3K14A 1VQ4F 1JJ2F 1CLIA 3AGKA 1N8RH 1CN7A 1K73H 1XRGA 4I55B 3D01A 3ERNA 3MCQA 4X1YA 5EWRA 1GO0A 4YJ2B 1YGYA 3C8LA 3N2GB 3SIVA 2MQEA 1U3PA 3JAWA 3CXCF 4C8EA 3LWOC 4YJ3B 5EIBC 3VO8A 4EB6B 5G4UC 5JH7A 1TVKB 4O4JA 4X3LA 2OZBA 3BYQA 4ZHYB 4ZK7A 2H8EA 1IV2A 3KJJA 2QI2A 1W2BF 1VQVA 5IJ0B 5J2TA 2VAPA 1Q81H 3JALB 2BTUA 3D00A 1RLGA 2HP3A 1RQ7A 3VYTC 3CYPB 3ZO8A 1CK2A 1FFXB 4BVTA 5IJ9A 3HKCB 4F6RA 3LWQC 2Z1TA 4IIJB 4TV9B 4NWOB 4PWTA 1YIJF 3QHDA 1TUBA 3O85A 4RQOA 3IR9A 4ZOLB 1W581 4X3MA 2P6YA 2QTPA 3VYUC 4X1KA 3JAKA 2ZODA 3VYSC 5GONB 4RHAA 5GANK 5FLXM 2VGNA 3PAFA 3NVKE 1QAHA 5HY2A 3CPQA 3K2XA 4XCQA 3RYFA 1W55A 3N2KB 4NQ3A 3V7QA 2G9IA 5EYPB 5JVDB 3WGLA 3CMAF 3I56F 4X20A 1VQMF 1QVGF 5HY0A 4B46A 4BVRA 4BT7A 3GTZA 4BT6A 5JH7B 3IMPA 4C82A 4I55A 4BW0B 4YJ2A 3N2GA 3CCVF 1U43A 4TV8B 5IYZB 5LXTA 3CPWF 1JY8A 3M4SA 1UFYA 4O4HB 4YJ3A 4BVSA 4EB6A 1ODEA 5DCVA 2AMTA 1TVKA 5EZYA 4B5CA 3ZP4A 1RA4A 3I55F 4WBNB 2DYYA 3MBMA 3RE3A 5B8FA 3KJKA 3G6EF 3V4DA 4DRXA 3Q8HA 5IJ0A 4G4VA 4IHJA 3JALA 2BTOA 3JVHA 2FGYA 3RA6A 3NVIB 5GINC 1K9MH 3PLAC 1H47A 2BO1A 3CCQF 1UI9A 4DXDA 5HY1A 3HKCA 4IIJA 4TV9A 1NQ3A 1J7HA 5LA6B 3IKEA 3P10A 2PMPA 3MDOA 4ZOLA 3LWPC 2ZF8A 3GYQA 3CD6F 1XV2A 4B62A 1X7PA 4BT2A 1W5EA 3F0FA 2VGMA 5GONA 3NMUC 4C4WC 3EORA 3N2KA 1PF5A 5A2QM 3OBWA 3WJPA 3HTNA 3ZOPA
chains in the Genus database with same CATH topology
2H8EA 2H8CA 1Q8RA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2H8E A;  2H8C A;  1Q8R A; 
#chains in the Genus database with same CATH topology
 5EYP A;  5JVD A;  2KTV A;  2CW4 A;  3CC7 F;  2K1S A;  3F0G A;  1E7K A;  1SA0 A;  4HNA B;  4ZHW A;  4X1I B;  3LYB A;  3JAR B;  5LXT B;  1YJ9 F;  3J80 M;  5LP6 B;  4G4W A;  3RYI B;  1IV1 A;  5EZY B;  4BT5 A;  5JQG B;  3MCA B;  3VI6 A;  1R1M A;  1XBI A;  3MQW A;  2UYN A;  2L26 A;  1VQ6 F;  3WJQ A;  1DT9 A;  3IEW A;  3RYH A;  4TV8 A;  4B45 A;  4DRX B;  1OAP A;  5IYZ A;  4G4Z A;  4IHJ B;  4TUY B;  4O4H A;  3KE1 A;  3VCZ A;  3HJW C;  2LCA A;  3B6N A;  4E6E A;  1KD1 H;  4WBN A;  3C9R A;  1VQ5 F;  2ZAU A;  4M8I A;  2HS4 A;  4R40 B;  1Q8R A;  1YHQ F;  3DDN A;  5MN5 A;  3S06 A;  3P0Z A;  1QU9 A;  4G4Y A;  3TD4 A;  5EB0 A;  3JAT B;  1YJW F;  1W5A A;  3E20 B;  2HP0 B;  2VAM A;  3JAM M;  4BT3 A;  5BMV A;  2AIZ P;  3OON A;  1W42 A;  3FBA A;  5HWE A;  5JCO C;  3F6M A;  2GVI A;  1SZQ A;  3UT5 B;  1VQ8 F;  5LA6 A;  2UYK A;  2KGW A;  3CB2 A;  4ZHV A;  1Q86 H;  3VOB A;  5CA0 B;  2DT4 A;  3R0P A;  4O4L B;  1VH8 A;  2NMU A;  2H8C A;  1SA0 B;  1W57 A;  5JCO A;  2V9Y A;  1QD9 A;  2Z1E A;  2I6D A;  4ZHQ B;  3IEQ A;  1SDS A;  2UYN B;  1KC8 H;  1VK3 A;  1T0K B;  1FSZ A;  3RYH B;  1ONI A;  4O2B B;  4HNA A;  4X1I A;  3JAR A;  3KIZ A;  5LOV A;  3ON1 A;  5LP6 A;  3RYI A;  1KQS F;  5MN6 A;  2IG8 A;  2F9Z C;  5JQG A;  3S0Y A;  3ZP7 A;  3C9U A;  1X52 A;  1YIT F;  3LWR C;  1W41 A;  4EI9 A;  2OTM A;  5G4V C;  1VQN F;  4C8I A;  4TZZ A;  2HRY A;  4TUY A;  1VQP F;  5EB1 B;  2OHW A;  3OBY A;  4FFB B;  1JN1 A;  3ELC A;  4EI8 A;  1VQL F;  2QEX F;  3CC4 F;  3N4Z A;  4NUT A;  3CCS F;  1NJI H;  5BMV B;  3LME A;  4I50 A;  3LWV C;  2Q1X A;  5C8Y B;  1DBF A;  5HXU A;  2ZOV A;  3ESJ A;  1M1K H;  1W59 A;  4I4T B;  1GZ0 A;  3S0W A;  2LBW A;  3KHN A;  3FFM A;  4BT4 A;  4BY9 D;  1FNJ A;  1Z5W A;  5FNV B;  2Q1Y A;  1U40 A;  2RHL A;  3JAT A;  4O2A B;  5KX5 B;  2HP0 A;  4ERH A;  2OTJ F;  2FC3 A;  3FD6 A;  5LYJ B;  3P4E A;  5ITZ B;  3UT5 A;  5GIP C;  3CCM F;  3CCL F;  3SIU A;  3HKD A;  2KTU A;  4ZI7 B;  5CA0 A;  2Z1F A;  4O4L A;  3HKB B;  3QUW A;  1W5B A;  2CHS A;  5LOV B;  3WXM B;  2RHO A;  2HX0 A;  4ZHQ A;  3K12 A;  3DC2 A;  2JNB A;  2UYP A;  3VMF B;  2Z1U A;  3E1Y A;  3T80 A;  3D54 A;  1K8A H;  3HKE B;  2WAL A;  2LBX A;  3JCM M;  1VQO F;  4O2B A;  3CCR F;  4U3J B;  3V3T A;  2R75 1;  4C81 A;  2CSL A;  3TD5 A;  5IT9 M;  1Z5V A;  2HS3 A;  1RQ2 A;  3K0T A;  1VQK F;  3U0O A;  1YJN F;  2HS0 A;  2HQS C;  1NMU B;  4EI7 A;  1OFU A;  3LFO A;  3E22 A;  5J2U B;  4O4I B;  3F0D A;  1W5F A;  4I50 B;  5CB4 B;  1JFF A;  2VAW A;  5EAZ A;  1S72 F;  4LCK A;  1FNK A;  3WJR A;  3L7Q A;  3J7A R;  3S02 A;  3S0H A;  3CME F;  2I6R A;  3G4S F;  3CCE F;  2VXY A;  1IPA A;  4FFB A;  2RB9 A;  1YI2 F;  5FJ4 C;  4G4X A;  1KNJ A;  1VQ7 F;  2HVY D;  3FPI A;  2HRU A;  3RA5 A;  5C8Y A;  4G88 A;  3C9T A;  5EIB D;  4BVQ A;  3C9S A;  3VIU A;  2RHH A;  3HKD B;  3JAS B;  4I4T A;  2ZVZ A;  1RLU A;  1H7M A;  3WGN A;  5KMG B;  3GHZ A;  5FNV A;  2CVL A;  1GO1 A;  3G71 F;  3F0E A;  1COM A;  4O2A A;  5KX5 A;  2GZL A;  1GX1 A;  3NK6 A;  3CG6 A;  4C8G A;  5LYJ A;  5HP7 A;  1U3L A;  1H48 A;  2ALE A;  3RYC B;  1X7O A;  2ZVY A;  2UZH A;  5ITZ A;  5LP6 C;  1W40 A;  3VOA A;  4ZI7 A;  5MN4 A;  3QTY A;  4X1Y B;  4LNU A;  2KG4 A;  3HKB A;  3WPW A;  3WGM A;  2UYJ A;  5CA1 A;  5HY4 A;  3WGJ A;  3CCJ F;  3JAW B;  3HAX D;  3E22 B;  3I3F A;  5GAP K;  2Z01 A;  2YYE A;  1ZWZ A;  4O4J B;  2CHT A;  5HP8 A;  1JFF B;  3HKE A;  3CC2 F;  4U3J A;  5AVM A;  5HXZ A;  2LBT A;  1QVF F;  1KNK A;  4U39 A;  5J2T B;  3FD5 A;  5J2U A;  2GLZ A;  3J81 M;  1Q7Y H;  4O4I A;  1X25 A;  1IV3 A;  2B33 A;  2YXZ A;  2PHN A;  3N4Y A;  5CB4 A;  3CYQ A;  1Q82 H;  1M90 H;  1JD1 A;  3WGK A;  2EWC A;  2OTL F;  5IJ9 B;  3CCU F;  5GIO C;  4F6R B;  3LDT A;  3TD3 A;  3VTI C;  1IV4 A;  1TUB B;  5EO3 A;  1PXW A;  1W3E X;  2AIF A;  2IQQ A;  2RHJ A;  4X1K B;  2N48 A;  2W8B C;  3JAK B;  3NK7 A;  3WPX A;  3V7E A;  1YQN A;  1XHO A;  3I7T A;  1FFX A;  3IKF A;  3M1X A;  3JAS A;  5KMG A;  3RYF B;  4LNU B;  2IAF A;  2CZW A;  2BTQ B;  2CWJ A;  2H6L A;  1T0A A;  3M84 A;  5CA1 B;  1VQ9 F;  4X20 B;  3S03 A;  3HWU A;  4KWE A;  3RYC A;  3OW2 F;  2R6R 1;  2QA4 F;  1VHA A;  3K14 A;  1VQ4 F;  1JJ2 F;  1CLI A;  3AGK A;  1N8R H;  1CN7 A;  1K73 H;  1XRG A;  4I55 B;  3D01 A;  3ERN A;  3MCQ A;  4X1Y A;  5EWR A;  1GO0 A;  4YJ2 B;  1YGY A;  3C8L A;  3N2G B;  3SIV A;  2MQE A;  1U3P A;  3JAW A;  3CXC F;  4C8E A;  3LWO C;  4YJ3 B;  5EIB C;  3VO8 A;  4EB6 B;  5G4U C;  5JH7 A;  1TVK B;  4O4J A;  4X3L A;  2OZB A;  3BYQ A;  4ZHY B;  4ZK7 A;  2H8E A;  1IV2 A;  3KJJ A;  2QI2 A;  1W2B F;  1VQV A;  5IJ0 B;  5J2T A;  2VAP A;  1Q81 H;  3JAL B;  2BTU A;  3D00 A;  1RLG A;  2HP3 A;  1RQ7 A;  3VYT C;  3CYP B;  3ZO8 A;  1CK2 A;  1FFX B;  4BVT A;  5IJ9 A;  3HKC B;  4F6R A;  3LWQ C;  2Z1T A;  4IIJ B;  4TV9 B;  4NWO B;  4PWT A;  1YIJ F;  3QHD A;  1TUB A;  3O85 A;  4RQO A;  3IR9 A;  4ZOL B;  1W58 1;  4X3M A;  2P6Y A;  2QTP A;  3VYU C;  4X1K A;  3JAK A;  2ZOD A;  3VYS C;  5GON B;  4RHA A;  5GAN K;  5FLX M;  2VGN A;  3PAF A;  3NVK E;  1QAH A;  5HY2 A;  3CPQ A;  3K2X A;  4XCQ A;  3RYF A;  1W55 A;  3N2K B;  4NQ3 A;  3V7Q A;  2G9I A;  5EYP B;  5JVD B;  3WGL A;  3CMA F;  3I56 F;  4X20 A;  1VQM F;  1QVG F;  5HY0 A;  4B46 A;  4BVR A;  4BT7 A;  3GTZ A;  4BT6 A;  5JH7 B;  3IMP A;  4C82 A;  4I55 A;  4BW0 B;  4YJ2 A;  3N2G A;  3CCV F;  1U43 A;  4TV8 B;  5IYZ B;  5LXT A;  3CPW F;  1JY8 A;  3M4S A;  1UFY A;  4O4H B;  4YJ3 A;  4BVS A;  4EB6 A;  1ODE A;  5DCV A;  2AMT A;  1TVK A;  5EZY A;  4B5C A;  3ZP4 A;  1RA4 A;  3I55 F;  4WBN B;  2DYY A;  3MBM A;  3RE3 A;  5B8F A;  3KJK A;  3G6E F;  3V4D A;  4DRX A;  3Q8H A;  5IJ0 A;  4G4V A;  4IHJ A;  3JAL A;  2BTO A;  3JVH A;  2FGY A;  3RA6 A;  3NVI B;  5GIN C;  1K9M H;  3PLA C;  1H47 A;  2BO1 A;  3CCQ F;  1UI9 A;  4DXD A;  5HY1 A;  3HKC A;  4IIJ A;  4TV9 A;  1NQ3 A;  1J7H A;  5LA6 B;  3IKE A;  3P10 A;  2PMP A;  3MDO A;  4ZOL A;  3LWP C;  2ZF8 A;  3GYQ A;  3CD6 F;  1XV2 A;  4B62 A;  1X7P A;  4BT2 A;  1W5E A;  3F0F A;  2VGM A;  5GON A;  3NMU C;  4C4W C;  3EOR A;  3N2K A;  1PF5 A;  5A2Q M;  3OBW A;  3WJP A;  3HTN A;  3ZOP A; 
#chains in the Genus database with same CATH homology
 2H8E A;  2H8C A;  1Q8R A; 
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similar chains in the pdb database (?% sequence similarity)

 
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