2RRFA

The solution structure of the c-terminal region of zinc finger fyve domain-containing protein 21
Total Genus 19
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
19
sequence length
141
structure length
141
Chain Sequence
GSSGSSGAEFYDKQLKVLLSGATFLVTFGNSEKPETMTCRLSNNQRYLFLDGDSHYEIEIVHISTVQILTEGFPPGGGNARATGMFLQYTVPGTEGVTQLKLTVVEDVTVGRRQAVAWLVAMHKAAKLLYESRDQSGPSSG
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords Zinc finger FYVE domain-containing protein 21
publication title ZF21 protein, a regulator of the disassembly of focal adhesions and cancer metastasis, contains a novel noncanonical pleckstrin homology domain
pubmed doi rcsb
source organism Homo sapiens
molecule tags Unknown function
total genus 19
structure length 141
sequence length 141
ec nomenclature
pdb deposition date 2010-08-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF16696 ZFYVE21_C Zinc finger FYVE domain-containing protein 21 C-terminus
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.29.160 Mainly Beta Roll PH-domain like PH-domain like 2rrfA00
2RRFA
chains in the Genus database with same CATH superfamily
4Y94A 5JLJB 1T77A 2LG1A 3PP2A 4WJ7A 4HSIA 5D3YA 3ML4A 4HATB 1K5GB 2NMBA 2H7EA 5I2SA 4ZRIA 2ELBA 4HDOA 2RRFA 1V89A 5JHHA 1P5TA 2KIEA 1MAIA 4GZUA 2MDXA 5KQ1A 2DYNA 2GCLA 3DCXA 2I5FA 1ZSQA 1EF1A 5DIFB 3VIAA 4A6FB 4QJ5B 3NWAA 4A6KA 2AL6A 2CODA 3KRXA 1U27A 1KI1B 2LOXA 2Y8FA 1FHXA 3A8QA 5HE1A 1U5FA 1BWNA 2KCJA 3GYOA 1LW3A 4HAZB 2P0FA 5C5BA 2LYDA 4IOYX 2GJYA 2CRFA 2NBVA 2CAYA 2KUPA 4HAWB 1X86A 1NTYA 1ZC3B 2XQNM 4KVGB 1PLSA 4DX90 4HAVB 3AU5A 4XWXA 2H7DA 4KAXB 1E5WA 4HHVA 1IRSA 2FJUB 3SV1A 4ZRKA 1DROA 1Y19B 1KZ7A 4HB0B 1J0WA 4Z2NA 1SGHA 3HSAA 5CLQB 4F7UP 3CXBB 4PNKA 2M38A 3NSUA 4HAXB 1WJ1A 3HIEA 1U5EA 2UVMA 3PVUA 2KR0A 2IFSA 2DN6A 3ODWA 1W1DA 2DHKA 4A6HA 4PQ0A 5DH9B 1Y5OA 5D27A 5LOPB 2Z0QA 5GOWB 4KHAA 3ULCA 2J59M 5KCVA 3G9WA 1X05A 2X18A 2EC1A 3SNHA 1FAOA 3WYFB 1FB8A 2N23A 4K17A 5JHGA 3OHMB 4CHMA 1UNQA 4K2OA 1OQNA 1J19A 1U5GA 2HE7A 4D6WA 3HQCA 3F5RA 1XKEA 5FI1A 4YONA 5D3XA 1W1HA 2J0JA 4BBKA 2Y8GA 2ZPYA 3N7CA 5KQ4A 2QKLA 5C5BB 1FGYA 1TXDA 4OT1A 1QC6A 2COFA 1X1FA 3KY9A 2P8VA 1ZVRA 2G35A 4CYEA 2DFKA 1TJ6A 2YT1A 1WI1A 4B6HA 4CSQA 4HB4B 2YT0A 5JP4A 2DTCA 4QXAB 5DHFB 4EJNA 2KIGA 2QKMA 3SO6A 5L81A 5LONB 1U29A 2L2IA 3PSCA 3QIJA 3AJ4A 2DYQA 2DA0A 1AQCA 1DDVA 1V61A 2VKIA 3D8FA 5J3YA 1PMSA 3FM8C 3SUZA 1V5MA 4GPTB 3P7ZA 1SHCA 2W2WA 4Z2MB 1ISNA 1FHWA 4MT7A 1V5UA 1XD4A 2R0DA 1WGQA 2Z0PA 5LG4B 3A8PA 3IVFA 4EMOA 1RRPB 1N3HA 4GXBA 5HE2A 1MPHA 2BCJA 1QQGA 5EFXA 1P3RA 3BINA 3FEHA 4KHBB 5D3VA 1Q67A 2Z14A 2RUKB 2I1KA 2YS1A 2E2XA 2YRYA 1NU2A 4L6EA 2D10A 2Q13A 4QJ4B 2ROVA 1M7EA 2I1JA 3DXDA 1MK9B 1DDMA 2DKQA 2OTXA 2Y7BA 1MIZB 2D4QA 5J3QA 1FOEA 2RVBB 1UPRA 4F7GA 4IAPA 3WA0A 2YS5A 1X11A 1MKEA 3U12A 3BJIA 3X23A 5M4YB 4MK0A 3TFMA 2VRWB 2ELAA 2DKPA 4P7IA 3KRWA 2RLOA 1XODA 3TW1A 2D9WA 2MKRA 2W2XC 4L1RA 1NTVA 3M1IB 4CHJA 3NWFA 3U8ZA 5IRSA 1H4RA 1RJ2A 2P0HA 4HB2B 2COAA 1Z87A 3NW8A 2Z4DA 1V5PA 3LJUX 3T06A 2NZ8B 3CIKA 2MFQA 2Z13A 1P6SA 4A6FA 4QJ3B 3KZ1A 4NSWA 3HK0A 5FI0A 2L1CA 2VSZA 5DI9B 1FGZA 2DLWA 3U7DA 1LB1A 4EKUA 3ZVRA 2DX5A 2ADZA 3ODXA 2D9VA 2Z59A 1U5DA 4C0AA 2D9YA 1UEFA 1I7AA 4MY6A 4HDQA 3PEGA 3D8DA 3A98B 2COCA 1W1GA 1U2BA 1TQZA 2K49A 3SYXA 2JP2A 1KZGA 4TYZA 3V5WA 1NI2A 3D8EA 2W2XD 1ZYIA 3GYPA 1MK7B 5CLLB 4WVFB 1XCGA 1BTKA 4K81A 2K2UA 4DX8A 3DXEA 4GMXB 2V76A 2GUMA 1EVHA 1MI1A 3RCPA 2FJLA 2K00A 3HW2B 1XX0A 3UZTA 1M7RA 2RSGA 4ZRJA 3A58A 2YF0A 5D3WA 5HE0A 2OQBA 2EMTA 4KHOA 4D0NB 3ULBA 3PVWA 2D9ZA 1BTNA 3MDBC 4HAYB 2UZRA 2J0MA 2DHJA 4TKNA 5C6RA 4F7HA 2N0YA 1V88A 4NY0A 3MPXA 2MWNB 2IYBA 1UNRA 2GS0A 1EGXA 2M14A 4GOUA 3PVLA 2YVCA 4WSFA 1PFJA 5I2MA 4GNKB 2RNRB 2ZKMX 1MIXA 3TVVA 1DBHA 2CY4A 2YSZA 3OANA 2D2QA 3FSSA 3F0WA 3ODOA 4H8SA 2LULA 1DYNA 2UZSA 2DHIA 4YL8A 1WJMA 1ZC4B 2HTHB 2D11A 1WVHA 3AU4A 1UNPA 4A5KA 1BAKA 1X1GA 2YS3A 2RGNB 1H10A 3ZDTA 2R09A 2Z0OA 1EAZA 2DX1A 2P0DA 3FVCA 4DBBA 2EJ8A 3TCAA 1UPQA 4K2PA 5HE3A 2R2YA 1GC6A 4OSNA 1DDWA 2AEHA 1OY2A 3O96A 4GN1A 2EMSA 1AWEA 2I5CA 1I2HA 1ZM0A 2CY5A 2YT2A 3DXCA 3VOQA 4HAUB 3B77A 4DIXA 4HB3B 2K2JA 3KSYA 1B55A 4KHBA 3NWDA 1XR0B 2J0KA 3PZDA 2PZ1A 3QBVB 1K5DB 3QWMA 2KGXB 2K8EA 2LOZA 3PG7A 5C79A 5J3TA 2D9XA 5DHAB 1GG3A 2GCJA 4DXAB 3TO1A 4IFSA 4GMVA 2LKOA 1GC7A 5C16A 1FHOA 3P6AA 1WG7A 2KUQA 2ROZB 1OMWA 1WGUA
chains in the Genus database with same CATH topology
3NWFA 4L1RA 5IRSA 4DIXA 4PQ0A 4Z2NA 4HSIA 3GYOA 1ZYIA 4KHOA 4GOUA 4KHAA 4KHBA 3NW8A 2Z4DA 3GYPA 3NWDA 3U12A 4IOYX 2Z59A 2GCLA 3FVCA 4KHBB 4GNKB 5I2MA 5M4YB 2ZKMX 2NBVA 2Z13A 2R2YA 2Z14A 4OSNA 2K8EA 4OT1A 3TVVA 4QJ3B 3HIEA 2GUMA 4Z2MB 5I2SA 2KR0A 4QJ5B 3FSSA 3NWAA 3OHMB 2GCJA 4QJ4B 2RRFA 4IFSA 3TO1A 4CSQA 4QXAB 3TW1A 4D6WA 2K49A 2KUQA 2YT2A 5LG4B 2KIEA 2KIGA 2FJUB 3A58A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2RRF A; 
#chains in the Genus database with same CATH topology
 4Y94 A;  5JLJ B;  1T77 A;  2LG1 A;  3PP2 A;  4WJ7 A;  4HSI A;  5D3Y A;  3ML4 A;  4HAT B;  1K5G B;  2NMB A;  2H7E A;  5I2S A;  4ZRI A;  2ELB A;  4HDO A;  2RRF A;  1V89 A;  5JHH A;  1P5T A;  2KIE A;  1MAI A;  4GZU A;  2MDX A;  5KQ1 A;  2DYN A;  2GCL A;  3DCX A;  2I5F A;  1ZSQ A;  1EF1 A;  5DIF B;  3VIA A;  4A6F B;  4QJ5 B;  3NWA A;  4A6K A;  2AL6 A;  2COD A;  3KRX A;  1U27 A;  1KI1 B;  2LOX A;  2Y8F A;  1FHX A;  3A8Q A;  5HE1 A;  1U5F A;  1BWN A;  2KCJ A;  3GYO A;  1LW3 A;  4HAZ B;  2P0F A;  5C5B A;  2LYD A;  4IOY X;  2GJY A;  2CRF A;  2NBV A;  2CAY A;  2KUP A;  4HAW B;  1X86 A;  1NTY A;  1ZC3 B;  2XQN M;  4KVG B;  1PLS A;  4DX9 0;  4HAV B;  3AU5 A;  4XWX A;  2H7D A;  4KAX B;  1E5W A;  4HHV A;  1IRS A;  2FJU B;  3SV1 A;  4ZRK A;  1DRO A;  1Y19 B;  1KZ7 A;  4HB0 B;  1J0W A;  4Z2N A;  1SGH A;  3HSA A;  5CLQ B;  4F7U P;  3CXB B;  4PNK A;  2M38 A;  3NSU A;  4HAX B;  1WJ1 A;  3HIE A;  1U5E A;  2UVM A;  3PVU A;  2KR0 A;  2IFS A;  2DN6 A;  3ODW A;  1W1D A;  2DHK A;  4A6H A;  4PQ0 A;  5DH9 B;  1Y5O A;  5D27 A;  5LOP B;  2Z0Q A;  5GOW B;  4KHA A;  3ULC A;  2J59 M;  5KCV A;  3G9W A;  1X05 A;  2X18 A;  2EC1 A;  3SNH A;  1FAO A;  3WYF B;  1FB8 A;  2N23 A;  4K17 A;  5JHG A;  3OHM B;  4CHM A;  1UNQ A;  4K2O A;  1OQN A;  1J19 A;  1U5G A;  2HE7 A;  4D6W A;  3HQC A;  3F5R A;  1XKE A;  5FI1 A;  4YON A;  5D3X A;  1W1H A;  2J0J A;  4BBK A;  2Y8G A;  2ZPY A;  3N7C A;  5KQ4 A;  2QKL A;  5C5B B;  1FGY A;  1TXD A;  4OT1 A;  1QC6 A;  2COF A;  1X1F A;  3KY9 A;  2P8V A;  1ZVR A;  2G35 A;  4CYE A;  2DFK A;  1TJ6 A;  2YT1 A;  1WI1 A;  4B6H A;  4CSQ A;  4HB4 B;  2YT0 A;  5JP4 A;  2DTC A;  4QXA B;  5DHF B;  4EJN A;  2KIG A;  2QKM A;  3SO6 A;  5L81 A;  5LON B;  1U29 A;  2L2I A;  3PSC A;  3QIJ A;  3AJ4 A;  2DYQ A;  2DA0 A;  1AQC A;  1DDV A;  1V61 A;  2VKI A;  3D8F A;  5J3Y A;  1PMS A;  3FM8 C;  3SUZ A;  1V5M A;  4GPT B;  3P7Z A;  1SHC A;  2W2W A;  4Z2M B;  1ISN A;  1FHW A;  4MT7 A;  1V5U A;  1XD4 A;  2R0D A;  1WGQ A;  2Z0P A;  5LG4 B;  3A8P A;  3IVF A;  4EMO A;  1RRP B;  1N3H A;  4GXB A;  5HE2 A;  1MPH A;  2BCJ A;  1QQG A;  5EFX A;  1P3R A;  3BIN A;  3FEH A;  4KHB B;  5D3V A;  1Q67 A;  2Z14 A;  2RUK B;  2I1K A;  2YS1 A;  2E2X A;  2YRY A;  1NU2 A;  4L6E A;  2D10 A;  2Q13 A;  4QJ4 B;  2ROV A;  1M7E A;  2I1J A;  3DXD A;  1MK9 B;  1DDM A;  2DKQ A;  2OTX A;  2Y7B A;  1MIZ B;  2D4Q A;  5J3Q A;  1FOE A;  2RVB B;  1UPR A;  4F7G A;  4IAP A;  3WA0 A;  2YS5 A;  1X11 A;  1MKE A;  3U12 A;  3BJI A;  3X23 A;  5M4Y B;  4MK0 A;  3TFM A;  2VRW B;  2ELA A;  2DKP A;  4P7I A;  3KRW A;  2RLO A;  1XOD A;  3TW1 A;  2D9W A;  2MKR A;  2W2X C;  4L1R A;  1NTV A;  3M1I B;  4CHJ A;  3NWF A;  3U8Z A;  5IRS A;  1H4R A;  1RJ2 A;  2P0H A;  4HB2 B;  2COA A;  1Z87 A;  3NW8 A;  2Z4D A;  1V5P A;  3LJU X;  3T06 A;  2NZ8 B;  3CIK A;  2MFQ A;  2Z13 A;  1P6S A;  4A6F A;  4QJ3 B;  3KZ1 A;  4NSW A;  3HK0 A;  5FI0 A;  2L1C A;  2VSZ A;  5DI9 B;  1FGZ A;  2DLW A;  3U7D A;  1LB1 A;  4EKU A;  3ZVR A;  2DX5 A;  2ADZ A;  3ODX A;  2D9V A;  2Z59 A;  1U5D A;  4C0A A;  2D9Y A;  1UEF A;  1I7A A;  4MY6 A;  4HDQ A;  3PEG A;  3D8D A;  3A98 B;  2COC A;  1W1G A;  1U2B A;  1TQZ A;  2K49 A;  3SYX A;  2JP2 A;  1KZG A;  4TYZ A;  3V5W A;  1NI2 A;  3D8E A;  2W2X D;  1ZYI A;  3GYP A;  1MK7 B;  5CLL B;  4WVF B;  1XCG A;  1BTK A;  4K81 A;  2K2U A;  4DX8 A;  3DXE A;  4GMX B;  2V76 A;  2GUM A;  1EVH A;  1MI1 A;  3RCP A;  2FJL A;  2K00 A;  3HW2 B;  1XX0 A;  3UZT A;  1M7R A;  2RSG A;  4ZRJ A;  3A58 A;  2YF0 A;  5D3W A;  5HE0 A;  2OQB A;  2EMT A;  4KHO A;  4D0N B;  3ULB A;  3PVW A;  2D9Z A;  1BTN A;  3MDB C;  4HAY B;  2UZR A;  2J0M A;  2DHJ A;  4TKN A;  5C6R A;  4F7H A;  2N0Y A;  1V88 A;  4NY0 A;  3MPX A;  2MWN B;  2IYB A;  1UNR A;  2GS0 A;  1EGX A;  2M14 A;  4GOU A;  3PVL A;  2YVC A;  4WSF A;  1PFJ A;  5I2M A;  4GNK B;  2RNR B;  2ZKM X;  1MIX A;  3TVV A;  1DBH A;  2CY4 A;  2YSZ A;  3OAN A;  2D2Q A;  3FSS A;  3F0W A;  3ODO A;  4H8S A;  2LUL A;  1DYN A;  2UZS A;  2DHI A;  4YL8 A;  1WJM A;  1ZC4 B;  2HTH B;  2D11 A;  1WVH A;  3AU4 A;  1UNP A;  4A5K A;  1BAK A;  1X1G A;  2YS3 A;  2RGN B;  1H10 A;  3ZDT A;  2R09 A;  2Z0O A;  1EAZ A;  2DX1 A;  2P0D A;  3FVC A;  4DBB A;  2EJ8 A;  3TCA A;  1UPQ A;  4K2P A;  5HE3 A;  2R2Y A;  1GC6 A;  4OSN A;  1DDW A;  2AEH A;  1OY2 A;  3O96 A;  4GN1 A;  2EMS A;  1AWE A;  2I5C A;  1I2H A;  1ZM0 A;  2CY5 A;  2YT2 A;  3DXC A;  3VOQ A;  4HAU B;  3B77 A;  4DIX A;  4HB3 B;  2K2J A;  3KSY A;  1B55 A;  4KHB A;  3NWD A;  1XR0 B;  2J0K A;  3PZD A;  2PZ1 A;  3QBV B;  1K5D B;  3QWM A;  2KGX B;  2K8E A;  2LOZ A;  3PG7 A;  5C79 A;  5J3T A;  2D9X A;  5DHA B;  1GG3 A;  2GCJ A;  4DXA B;  3TO1 A;  4IFS A;  4GMV A;  2LKO A;  1GC7 A;  5C16 A;  1FHO A;  3P6A A;  1WG7 A;  2KUQ A;  2ROZ B;  1OMW A;  1WGU A; 
#chains in the Genus database with same CATH homology
 3NWF A;  4L1R A;  5IRS A;  4DIX A;  4PQ0 A;  4Z2N A;  4HSI A;  3GYO A;  1ZYI A;  4KHO A;  4GOU A;  4KHA A;  4KHB A;  3NW8 A;  2Z4D A;  3GYP A;  3NWD A;  3U12 A;  4IOY X;  2Z59 A;  2GCL A;  3FVC A;  4KHB B;  4GNK B;  5I2M A;  5M4Y B;  2ZKM X;  2NBV A;  2Z13 A;  2R2Y A;  2Z14 A;  4OSN A;  2K8E A;  4OT1 A;  3TVV A;  4QJ3 B;  3HIE A;  2GUM A;  4Z2M B;  5I2S A;  2KR0 A;  4QJ5 B;  3FSS A;  3NWA A;  3OHM B;  2GCJ A;  4QJ4 B;  2RRF A;  4IFS A;  3TO1 A;  4CSQ A;  4QXA B;  3TW1 A;  4D6W A;  2K49 A;  2KUQ A;  2YT2 A;  5LG4 B;  2KIE A;  2KIG A;  2FJU B;  3A58 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...