2RRFA

The solution structure of the c-terminal region of zinc finger fyve domain-containing protein 21
Total Genus 19
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
19
sequence length
141
structure length
141
Chain Sequence
GSSGSSGAEFYDKQLKVLLSGATFLVTFGNSEKPETMTCRLSNNQRYLFLDGDSHYEIEIVHISTVQILTEGFPPGGGNARATGMFLQYTVPGTEGVTQLKLTVVEDVTVGRRQAVAWLVAMHKAAKLLYESRDQSGPSSG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Unknown function
molecule keywords Zinc finger FYVE domain-containing protein 21
publication title ZF21 protein, a regulator of the disassembly of focal adhesions and cancer metastasis, contains a novel noncanonical pleckstrin homology domain
pubmed doi rcsb
source organism Homo sapiens
total genus 19
structure length 141
sequence length 141
ec nomenclature
pdb deposition date 2010-08-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF16696 ZFYVE21_C Zinc finger FYVE domain-containing protein 21 C-terminus
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.29.160 Mainly Beta Roll PH-domain like PH-domain like 2rrfA00
2RRFA
chains in the Genus database with same CATH superfamily
2OQBA 3ML4A 3QWMA 3DCXA 3QIJA 4GPTB 3WA0A 2KIGA 2QKLA 2H7EA 4K81A 3BINA 4IOYX 3DXEA 4KVGB 4EJNA 4KHOA 4EMOA 4H8SA 2ELAA 4HHVA 2DHJA 4HDOA 1P6SA 2CRFA 5KCVA 3TVVA 3MPXA 2AEHA 3U12A 3VIAA 1U5DA 2X18A 4KHBA 4HAVB 3M1IB 2R09A 1P3RA 2EMSA 4IFSA 3NWAA 3OANA 2CY4A 2MWNB 2YS1A 3T06A 4GXBA 1U29A 1K5GB 2EMTA 5HE3A 3SYXA 5DHAB 4HAXB 2DLWA 4WVFB 5DH9B 5D3YA 2GUMA 3GYOA 3AU4A 1WGUA 4D6WA 2IYBA 3HQCA 4MY6A 2M38A 5JLJB 4CHMA 1LW3A 5EFXA 3X23A 2EJ8A 4QJ3B 5FI1A 4OT1A 4MT7A 3IVFA 2Y8FA 3RCPA 5D27A 1XODA 2CODA 3HW2B 1UPRA 2NZ8B 3PSCA 2LKOA 1DYNA 3U7DA 1M7RA 5FI0A 4XWXA 2CAYA 2LYDA 2I5FA 3TCAA 1AWEA 3BJIA 1B55A 1GG3A 4TYZA 3KRWA 1NTYA 1X05A 1ZC3B 1WGQA 2L2IA 2YS3A 4HAYB 1W1DA 1ZVRA 2IFSA 3PVLA 2EC1A 2J0MA 5J3YA 2Z0OA 5DI9B 2ZPYA 1FB8A 2YT0A 5C16A 3UZTA 4A5KA 2G35A 2D2QA 1GC7A 3N7CA 2ROZB 4QJ4B 2UVMA 4HB2B 2Y7BA 2D11A 2DKQA 2DX1A 2RNRB 5M4YB 4PNKA 1U2BA 2RUKB 5I2MA 4HAWB 4L6EA 1KZGA 2N23A 2FJLA 4YONA 3KY9A 1OQNA 2K2JA 5JHHA 4CYEA 1H4RA 4DBBA 1P5TA 3D8FA 2PZ1A 2CY5A 2LOXA 2NMBA 3G9WA 5KQ4A 3AJ4A 3OHMB 3F0WA 2ADZA 2J0JA 5CLQB 3MDBC 5I2SA 4QJ5B 4NY0A 5D3VA 2D9ZA 2P0DA 4GN1A 3DXDA 5IRSA 1N3HA 2KR0A 3ULCA 3F5RA 2DYNA 4F7HA 2DKPA 4K2PA 2BCJA 2DYQA 3FM8C 3VOQA 4HSIA 5C79A 1SHCA 2COAA 4DX8A 2W2XD 5C5BA 2YSZA 2COCA 2H7DA 2P8VA 3AU5A 1WJMA 4GZUA 4B6HA 2K8EA 2K00A 3A8QA 2UZSA 3A58A 1FOEA 2RLOA 1NI2A 2Z14A 3PVWA 4A6FB 1Y19B 1DDMA 2D9YA 1MAIA 2AL6A 2K2UA 4YL8A 1LB1A 3TW1A 2Z59A 2RVBB 4MK0A 1NTVA 2L1CA 4HAZB 1KI1B 3QBVB 1X1FA 4IAPA 3FEHA 1WG7A 2DA0A 2HTHB 2D9VA 4DXAB 2KUQA 5LOPB 4BBKA 4K17A 2MKRA 2XQNM 4P7IA 4GMVA 4GMXB 1BTKA 2KIEA 4QXAB 1DDWA 4HB0B 1FHXA 4NSWA 2JP2A 1MIZB 3TO1A 1FHWA 3B77A 1MI1A 5LONB 2KGXB 3D8DA 2Y8GA 3ODOA 4KHBB 1PLSA 1X1GA 4DIXA 4WJ7A 2MDXA 3SO6A 4HB3B 1Z87A 2GCJA 1ZYIA 2J59M 2FJUB 3WYFB 5LG4B 5HE2A 3SNHA 1I7AA 3TFMA 2D4QA 2R2YA 1BTNA 4Z2NA 1UNRA 3A98B 4D0NB 2K49A 2COFA 2GS0A 4ZRKA 3SV1A 3ZDTA 2P0FA 2DTCA 3KZ1A 1XR0B 1T77A 3CIKA 1UPQA 1WVHA 1FAOA 2E2XA 1QQGA 4EKUA 1WI1A 4F7UP 5D3XA 1UNQA 4CSQA 1XKEA 3PEGA 1TXDA 4TKNA 2VKIA 3LJUX 3P6AA 1V61A 1V5PA 4GOUA 3O96A 2VSZA 2D9XA 3PG7A 3HIEA 1BWNA 4OSNA 3PP2A 1AQCA 1M7EA 1ISNA 5J3TA 1W1HA 2Q13A 3KSYA 2J0KA 2QKMA 1GC6A 5DIFB 1EGXA 3FSSA 2Z0QA 3FVCA 1RRPB 2RSGA 3CXBB 1U5EA 1Q67A 4K2OA 4F7GA 3DXCA 4Y94A 4GNKB 1QC6A 1UNPA 3V5WA 2P0HA 2ZKMX 1UEFA 1V89A 4HB4B 1EF1A 1U5FA 2YF0A 2DHKA 1FGYA 1Y5OA 3U8ZA 1PMSA 5CLLB 4CHJA 1X86A 1DBHA 2OTXA 2Z4DA 1FGZA 5JP4A 1MK7B 2DX5A 4HDQA 1DDVA 4Z2MB 4ZRJA 2KCJA 4A6KA 5HE1A 1EAZA 3ODWA 3D8EA 3ULBA 2D9WA 3NSUA 1MK9B 3ODXA 1I2HA 2I5CA 3KRXA 2DHIA 1ZM0A 1RJ2A 2I1KA 5DHFB 1E5WA 4C0AA 1V5UA 2LULA 2Z0PA 5GOWB 2YT1A 2MFQA 2N0YA 1OMWA 1IRSA 5KQ1A 2UZRA 3NWDA 2YRYA 1MPHA 2HE7A 1XX0A 1XD4A 5C5BB 1NU2A 2YVCA 2NBVA 2GJYA 1MKEA 3P7ZA 1KZ7A 1V5MA 2D10A 5HE0A 4DX90 5JHGA 1K5DB 5L81A 1SGHA 2Z13A 1WJ1A 3A8PA 3NW8A 4L1RA 5J3QA 1BAKA 4WSFA 1J19A 2YT2A 4HAUB 1OY2A 2YS5A 2VRWB 4HATB 2ROVA 4PQ0A 1EVHA 1TQZA 4A6HA 2W2WA 1H10A 2R0DA 3GYPA 3SUZA 4A6FA 2I1JA 1PFJA 4KAXB 1W1GA 1XCGA 2LOZA 1DROA 2RRFA 2LG1A 3NWFA 5D3WA 3HK0A 1U27A 3ZVRA 1ZC4B 5C6RA 2ELBA 3HSAA 1MIXA 1FHOA 1X11A 2RGNB 3PZDA 2DN6A 1ZSQA 2DFKA 2M14A 3PVUA 4ZRIA 2KUPA 1TJ6A 1U5GA 1J0WA 2GCLA 1V88A 2W2XC 2V76A 4KHAA
chains in the Genus database with same CATH topology
3GYPA 2KIEA 3FVCA 4QJ3B 4QXAB 2NBVA 2R2YA 4CSQA 4OT1A 3TW1A 2Z59A 3OHMB 4Z2NA 2Z4DA 2KIGA 3TO1A 2K49A 4IOYX 2RRFA 4GOUA 5I2SA 3NWFA 4KHOA 5M4YB 4QJ5B 3HIEA 2K8EA 4GNKB 2Z13A 4OSNA 4Z2MB 2ZKMX 3NW8A 4L1RA 5I2MA 2GUMA 3GYOA 5IRSA 2YT2A 4KHBB 4DIXA 2KR0A 3A58A 4D6WA 3TVVA 2Z14A 2GCJA 2KUQA 4PQ0A 3NWDA 3U12A 1ZYIA 4KHBA 4HSIA 2GCLA 2FJUB 3FSSA 4IFSA 3NWAA 5LG4B 4QJ4B 4KHAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2RRF A; 
#chains in the Genus database with same CATH topology
 2OQB A;  3ML4 A;  3QWM A;  3DCX A;  3QIJ A;  4GPT B;  3WA0 A;  2KIG A;  2QKL A;  2H7E A;  4K81 A;  3BIN A;  4IOY X;  3DXE A;  4KVG B;  4EJN A;  4KHO A;  4EMO A;  4H8S A;  2ELA A;  4HHV A;  2DHJ A;  4HDO A;  1P6S A;  2CRF A;  5KCV A;  3TVV A;  3MPX A;  2AEH A;  3U12 A;  3VIA A;  1U5D A;  2X18 A;  4KHB A;  4HAV B;  3M1I B;  2R09 A;  1P3R A;  2EMS A;  4IFS A;  3NWA A;  3OAN A;  2CY4 A;  2MWN B;  2YS1 A;  3T06 A;  4GXB A;  1U29 A;  1K5G B;  2EMT A;  5HE3 A;  3SYX A;  5DHA B;  4HAX B;  2DLW A;  4WVF B;  5DH9 B;  5D3Y A;  2GUM A;  3GYO A;  3AU4 A;  1WGU A;  4D6W A;  2IYB A;  3HQC A;  4MY6 A;  2M38 A;  5JLJ B;  4CHM A;  1LW3 A;  5EFX A;  3X23 A;  2EJ8 A;  4QJ3 B;  5FI1 A;  4OT1 A;  4MT7 A;  3IVF A;  2Y8F A;  3RCP A;  5D27 A;  1XOD A;  2COD A;  3HW2 B;  1UPR A;  2NZ8 B;  3PSC A;  2LKO A;  1DYN A;  3U7D A;  1M7R A;  5FI0 A;  4XWX A;  2CAY A;  2LYD A;  2I5F A;  3TCA A;  1AWE A;  3BJI A;  1B55 A;  1GG3 A;  4TYZ A;  3KRW A;  1NTY A;  1X05 A;  1ZC3 B;  1WGQ A;  2L2I A;  2YS3 A;  4HAY B;  1W1D A;  1ZVR A;  2IFS A;  3PVL A;  2EC1 A;  2J0M A;  5J3Y A;  2Z0O A;  5DI9 B;  2ZPY A;  1FB8 A;  2YT0 A;  5C16 A;  3UZT A;  4A5K A;  2G35 A;  2D2Q A;  1GC7 A;  3N7C A;  2ROZ B;  4QJ4 B;  2UVM A;  4HB2 B;  2Y7B A;  2D11 A;  2DKQ A;  2DX1 A;  2RNR B;  5M4Y B;  4PNK A;  1U2B A;  2RUK B;  5I2M A;  4HAW B;  4L6E A;  1KZG A;  2N23 A;  2FJL A;  4YON A;  3KY9 A;  1OQN A;  2K2J A;  5JHH A;  4CYE A;  1H4R A;  4DBB A;  1P5T A;  3D8F A;  2PZ1 A;  2CY5 A;  2LOX A;  2NMB A;  3G9W A;  5KQ4 A;  3AJ4 A;  3OHM B;  3F0W A;  2ADZ A;  2J0J A;  5CLQ B;  3MDB C;  5I2S A;  4QJ5 B;  4NY0 A;  5D3V A;  2D9Z A;  2P0D A;  4GN1 A;  3DXD A;  5IRS A;  1N3H A;  2KR0 A;  3ULC A;  3F5R A;  2DYN A;  4F7H A;  2DKP A;  4K2P A;  2BCJ A;  2DYQ A;  3FM8 C;  3VOQ A;  4HSI A;  5C79 A;  1SHC A;  2COA A;  4DX8 A;  2W2X D;  5C5B A;  2YSZ A;  2COC A;  2H7D A;  2P8V A;  3AU5 A;  1WJM A;  4GZU A;  4B6H A;  2K8E A;  2K00 A;  3A8Q A;  2UZS A;  3A58 A;  1FOE A;  2RLO A;  1NI2 A;  2Z14 A;  3PVW A;  4A6F B;  1Y19 B;  1DDM A;  2D9Y A;  1MAI A;  2AL6 A;  2K2U A;  4YL8 A;  1LB1 A;  3TW1 A;  2Z59 A;  2RVB B;  4MK0 A;  1NTV A;  2L1C A;  4HAZ B;  1KI1 B;  3QBV B;  1X1F A;  4IAP A;  3FEH A;  1WG7 A;  2DA0 A;  2HTH B;  2D9V A;  4DXA B;  2KUQ A;  5LOP B;  4BBK A;  4K17 A;  2MKR A;  2XQN M;  4P7I A;  4GMV A;  4GMX B;  1BTK A;  2KIE A;  4QXA B;  1DDW A;  4HB0 B;  1FHX A;  4NSW A;  2JP2 A;  1MIZ B;  3TO1 A;  1FHW A;  3B77 A;  1MI1 A;  5LON B;  2KGX B;  3D8D A;  2Y8G A;  3ODO A;  4KHB B;  1PLS A;  1X1G A;  4DIX A;  4WJ7 A;  2MDX A;  3SO6 A;  4HB3 B;  1Z87 A;  2GCJ A;  1ZYI A;  2J59 M;  2FJU B;  3WYF B;  5LG4 B;  5HE2 A;  3SNH A;  1I7A A;  3TFM A;  2D4Q A;  2R2Y A;  1BTN A;  4Z2N A;  1UNR A;  3A98 B;  4D0N B;  2K49 A;  2COF A;  2GS0 A;  4ZRK A;  3SV1 A;  3ZDT A;  2P0F A;  2DTC A;  3KZ1 A;  1XR0 B;  1T77 A;  3CIK A;  1UPQ A;  1WVH A;  1FAO A;  2E2X A;  1QQG A;  4EKU A;  1WI1 A;  4F7U P;  5D3X A;  1UNQ A;  4CSQ A;  1XKE A;  3PEG A;  1TXD A;  4TKN A;  2VKI A;  3LJU X;  3P6A A;  1V61 A;  1V5P A;  4GOU A;  3O96 A;  2VSZ A;  2D9X A;  3PG7 A;  3HIE A;  1BWN A;  4OSN A;  3PP2 A;  1AQC A;  1M7E A;  1ISN A;  5J3T A;  1W1H A;  2Q13 A;  3KSY A;  2J0K A;  2QKM A;  1GC6 A;  5DIF B;  1EGX A;  3FSS A;  2Z0Q A;  3FVC A;  1RRP B;  2RSG A;  3CXB B;  1U5E A;  1Q67 A;  4K2O A;  4F7G A;  3DXC A;  4Y94 A;  4GNK B;  1QC6 A;  1UNP A;  3V5W A;  2P0H A;  2ZKM X;  1UEF A;  1V89 A;  4HB4 B;  1EF1 A;  1U5F A;  2YF0 A;  2DHK A;  1FGY A;  1Y5O A;  3U8Z A;  1PMS A;  5CLL B;  4CHJ A;  1X86 A;  1DBH A;  2OTX A;  2Z4D A;  1FGZ A;  5JP4 A;  1MK7 B;  2DX5 A;  4HDQ A;  1DDV A;  4Z2M B;  4ZRJ A;  2KCJ A;  4A6K A;  5HE1 A;  1EAZ A;  3ODW A;  3D8E A;  3ULB A;  2D9W A;  3NSU A;  1MK9 B;  3ODX A;  1I2H A;  2I5C A;  3KRX A;  2DHI A;  1ZM0 A;  1RJ2 A;  2I1K A;  5DHF B;  1E5W A;  4C0A A;  1V5U A;  2LUL A;  2Z0P A;  5GOW B;  2YT1 A;  2MFQ A;  2N0Y A;  1OMW A;  1IRS A;  5KQ1 A;  2UZR A;  3NWD A;  2YRY A;  1MPH A;  2HE7 A;  1XX0 A;  1XD4 A;  5C5B B;  1NU2 A;  2YVC A;  2NBV A;  2GJY A;  1MKE A;  3P7Z A;  1KZ7 A;  1V5M A;  2D10 A;  5HE0 A;  4DX9 0;  5JHG A;  1K5D B;  5L81 A;  1SGH A;  2Z13 A;  1WJ1 A;  3A8P A;  3NW8 A;  4L1R A;  5J3Q A;  1BAK A;  4WSF A;  1J19 A;  2YT2 A;  4HAU B;  1OY2 A;  2YS5 A;  2VRW B;  4HAT B;  2ROV A;  4PQ0 A;  1EVH A;  1TQZ A;  4A6H A;  2W2W A;  1H10 A;  2R0D A;  3GYP A;  3SUZ A;  4A6F A;  2I1J A;  1PFJ A;  4KAX B;  1W1G A;  1XCG A;  2LOZ A;  1DRO A;  2RRF A;  2LG1 A;  3NWF A;  5D3W A;  3HK0 A;  1U27 A;  3ZVR A;  1ZC4 B;  5C6R A;  2ELB A;  3HSA A;  1MIX A;  1FHO A;  1X11 A;  2RGN B;  3PZD A;  2DN6 A;  1ZSQ A;  2DFK A;  2M14 A;  3PVU A;  4ZRI A;  2KUP A;  1TJ6 A;  1U5G A;  1J0W A;  2GCL A;  1V88 A;  2W2X C;  2V76 A;  4KHA A; 
#chains in the Genus database with same CATH homology
 3GYP A;  2KIE A;  3FVC A;  4QJ3 B;  4QXA B;  2NBV A;  2R2Y A;  4CSQ A;  4OT1 A;  3TW1 A;  2Z59 A;  3OHM B;  4Z2N A;  2Z4D A;  2KIG A;  3TO1 A;  2K49 A;  4IOY X;  2RRF A;  4GOU A;  5I2S A;  3NWF A;  4KHO A;  5M4Y B;  4QJ5 B;  3HIE A;  2K8E A;  4GNK B;  2Z13 A;  4OSN A;  4Z2M B;  2ZKM X;  3NW8 A;  4L1R A;  5I2M A;  2GUM A;  3GYO A;  5IRS A;  2YT2 A;  4KHB B;  4DIX A;  2KR0 A;  3A58 A;  4D6W A;  3TVV A;  2Z14 A;  2GCJ A;  2KUQ A;  4PQ0 A;  3NWD A;  3U12 A;  1ZYI A;  4KHB A;  4HSI A;  2GCL A;  2FJU B;  3FSS A;  4IFS A;  3NWA A;  5LG4 B;  4QJ4 B;  4KHA A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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