3HIEA

Structure of the membrane-binding domain of the sec3 subunit of the exocyst complex
Total Genus 42
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
165
structure length
161
Chain Sequence
SNFLAEQYERDRKAIINCCFSRPGEPPNNYITHVRIIEDSKFPSSRPPPDSKLENKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKDLEISEGFILTMSKKYYWETNSAKERTVFIKSLITLYIQTFEGHVPELVNWDLSLFYLD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Exocytosis
source organism Saccharomyces cerevisiae
publication title Structure-function study of the N-terminal domain of exocyst subunit Sec3.
pubmed doi rcsb
molecule keywords Exocyst complex component SEC3
total genus 42
structure length 161
sequence length 165
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2009-05-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF15277 Sec3-PIP2_bind Exocyst complex component SEC3 N-terminal PIP2 binding PH
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.29.90 Mainly Beta Roll PH-domain like PH-domain like 3hieA01
5LG4B 3A58A 5M4YB 3HIEA
chains in the Genus database with same CATH superfamily
1DDWA 1WG7A 5HE1A 3DXEA 2L1CA 2AEHA 3HW2B 5J3TA 2K2UA 4MT7A 1XD4A 1U5EA 2D10A 1P6SA 1TXDA 1PLSA 2R2YA 2CODA 4HAWB 2UVMA 4A5KA 1MK9B 3QIJA 2G35A 3IVFA 2GS0A 1P5TA 4KAXB 4MY6A 3BJIA 1TJ6A 5C79A 1V5MA 4PQ0A 1WVHA 1T77A 4NSWA 2Z13A 2I1KA 2D9ZA 2YF0A 2JP2A 3VOQA 2RRFA 2D4QA 5LONB 2DX5A 3PP2A 3TCAA 4HB2B 4TKNA 1XX0A 2I5FA 3T06A 2DHKA 1W1HA 3U8ZA 2Z4DA 3RCPA 5J3QA 3SO6A 3SUZA 2N0YA 5M4YB 3SNHA 3TFMA 2J0JA 3PG7A 2RUKB 4KHBA 1V5UA 3ULCA 2YS1A 3O96A 2LYDA 3NWFA 4HDOA 1XCGA 2CY5A 4WSFA 2CRFA 3P6AA 3BINA 1OMWA 1Q67A 5FI1A 4TYZA 2BCJA 1ZSQA 4QJ4B 2DLWA 2KIGA 3ULBA 3ZVRA 3KRXA 5KQ4A 4HDQA 3FSSA 1K5DB 3NSUA 2MWNB 3HK0A 1H4RA 2DYQA 4YL8A 1X86A 3PVUA 4HSIA 4A6HA 5L81A 1X05A 2I1JA 1MK7B 4IFSA 5JLJB 2P0HA 4HAUB 1OQNA 3QBVB 2EMSA 3N7CA 4GZUA 4PNKA 2EJ8A 2OQBA 2HE7A 4K81A 1UNQA 2YVCA 2ZPYA 4A6FA 2K49A 5CLLB 4ZRKA 2RSGA 1U29A 2NBVA 1AWEA 1XODA 2IFSA 2EMTA 2J0KA 1TQZA 2RGNB 1Y19B 2P0FA 2GJYA 5I2SA 4D6WA 2VKIA 1MPHA 1M7EA 2Y7BA 4MK0A 4C0AA 4EMOA 1GC6A 5D3VA 3ODXA 2R09A 1ZYIA 2YT1A 3GYPA 4KVGB 2Z14A 5D3YA 2LG1A 2K8EA 2AL6A 2ELBA 1DROA 1FOEA 1UPQA 2V76A 4KHOA 2J59M 4L1RA 4D0NB 2RNRB 1J0WA 4F7GA 3AJ4A 3M1IB 5DIFB 2ROZB 4L6EA 1EGXA 3V5WA 4HB0B 5KQ1A 2Y8FA 2R0DA 4GPTB 2Z0QA 3ODWA 3KSYA 4WJ7A 2FJLA 1QQGA 4HHVA 4HAVB 2OTXA 2YRYA 4DBBA 3FM8C 2CY4A 2XQNM 2DTCA 2EC1A 4GMXB 3TO1A 1SHCA 5C5BA 5HE2A 1UNPA 2YT2A 2M14A 5GOWB 3CIKA 5HE0A 1OY2A 2GCJA 3DCXA 4Y94A 4KHAA 2KUPA 2Z59A 4HB4B 5JHHA 2DKQA 2ROVA 1B55A 1Z87A 3D8FA 5DHFB 1GG3A 3A58A 4OSNA 2GUMA 2MKRA 3OANA 1X1GA 1EAZA 2UZSA 2DN6A 4KHBB 2NZ8B 4QJ5B 2RLOA 2YS5A 1BWNA 3HIEA 3NW8A 1FAOA 4GN1A 1FHWA 4GXBA 2MFQA 2DA0A 1EF1A 3SYXA 3F5RA 2LKOA 5DI9B 4F7UP 1KZGA 1SGHA 1FHOA 4B6HA 2HTHB 1PMSA 1FHXA 2RVBB 2COFA 1RJ2A 4CYEA 1U5FA 3ML4A 1DDMA 5HE3A 3AU5A 2VRWB 2DKPA 2KIEA 4Z2MB 1I2HA 1UPRA 1WJMA 3WYFB 2D9XA 1EVHA 2Z0OA 1BTNA 2D9WA 1V89A 1K5GB 4CSQA 5CLQB 2N23A 2YT0A 1WJ1A 4HB3B 2GCLA 3MPXA 5LOPB 2KR0A 4HAYB 4HAZB 2D2QA 4GOUA 2KCJA 1FGZA 3G9WA 2VSZA 4HATB 3U12A 2D9VA 2ADZA 4A6FB 1XKEA 1LW3A 1BAKA 1GC7A 4DX90 2NMBA 4YONA 1V61A 1FB8A 2ZKMX 1MAIA 1WGUA 4GNKB 2MDXA 2DX1A 1P3RA 1RRPB 3LJUX 3A98B 2I5CA 2QKLA 4QJ3B 1AQCA 5D3WA 4ZRJA 3ZDTA 3HQCA 3VIAA 1FGYA 1ZC3B 2E2XA 2J0MA 3KRWA 3P7ZA 1IRSA 1ISNA 3B77A 5D27A 1WGQA 2L2IA 2KUQA 2H7DA 1W1DA 4DXAB 2PZ1A 5JHGA 3DXCA 4DX8A 1Y5OA 4ZRIA 3ODOA 2IYBA 5DH9B 2D11A 1DBHA 2YS3A 5C6RA 5JP4A 1U27A 5FI0A 4DIXA 4IAPA 5I2MA 4EJNA 4Z2NA 2W2WA 1I7AA 1W1GA 1UEFA 3CXBB 4EKUA 5C5BB 2CAYA 3F0WA 2UZRA 4K2OA 1NI2A 1DYNA 5IRSA 1LB1A 3GYOA 2LULA 4HAXB 3PVWA 4K2PA 3FVCA 1QC6A 2LOZA 4F7HA 3A8PA 1V5PA 2DYNA 4BBKA 4H8SA 2Q13A 1WI1A 3UZTA 4XWXA 4CHMA 3QWMA 1U2BA 3HSAA 1M7RA 1U5DA 2DHJA 1NU2A 3U7DA 2DFKA 5J3YA 1V88A 3D8DA 4NY0A 3PVLA 3PZDA 3A8QA 5LG4B 3X23A 3KY9A 2ELAA 2K2JA 1KZ7A 4WVFB 1H10A 5C16A 4QXAB 1MKEA 1U5GA 3OHMB 2KGXB 5EFXA 1PFJA 5KCVA 3AU4A 5D3XA 1MIXA 1ZVRA 3DXDA 3NWDA 1NTYA 1XR0B 2DHIA 1BTKA 2P8VA 2COAA 4P7IA 3KZ1A 2Y8GA 4IOYX 2W2XD 1ZC4B 3TVVA 1J19A 2D9YA 3D8EA 1KI1B 2H7EA 1X11A 2FJUB 3WA0A 2X18A 2QKMA 2LOXA 2Z0PA 1MIZB 1NTVA 1X1FA 4CHJA 4K17A 2P0DA 1ZM0A 3PSCA 3MDBC 3FEHA 3PEGA 3SV1A 5DHAB 2M38A 3TW1A 1N3HA 4OT1A 2W2XC 3NWAA 2K00A 4GMVA 1DDVA 2COCA 1UNRA 2YSZA 1E5WA 4A6KA 1MI1A
chains in the Genus database with same CATH topology
2FJUB 4KHAA 2Z59A 4IFSA 2KUQA 2Z4DA 2GCLA 1ZYIA 4GNKB 5IRSA 3GYPA 3NWDA 2Z14A 4PQ0A 4QJ4B 5M4YB 2KIGA 3GYOA 2Z13A 2KR0A 2K8EA 3A58A 4OSNA 2GUMA 3FVCA 4GOUA 4KHBA 4QJ3B 4IOYX 3FSSA 5LG4B 2K49A 3TW1A 2RRFA 2NBVA 3U12A 4KHBB 4DIXA 3TVVA 2KIEA 2R2YA 4KHOA 4Z2MB 5I2MA 3NWFA 4Z2NA 4OT1A 4QJ5B 3TO1A 2ZKMX 3NWAA 4L1RA 3HIEA 2YT2A 3NW8A 5I2SA 4QXAB 4D6WA 4HSIA 3OHMB 4CSQA 2GCJA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5LG4 B;  3A58 A;  5M4Y B;  3HIE A; 
#chains in the Genus database with same CATH topology
 1DDW A;  1WG7 A;  5HE1 A;  3DXE A;  2L1C A;  2AEH A;  3HW2 B;  5J3T A;  2K2U A;  4MT7 A;  1XD4 A;  1U5E A;  2D10 A;  1P6S A;  1TXD A;  1PLS A;  2R2Y A;  2COD A;  4HAW B;  2UVM A;  4A5K A;  1MK9 B;  3QIJ A;  2G35 A;  3IVF A;  2GS0 A;  1P5T A;  4KAX B;  4MY6 A;  3BJI A;  1TJ6 A;  5C79 A;  1V5M A;  4PQ0 A;  1WVH A;  1T77 A;  4NSW A;  2Z13 A;  2I1K A;  2D9Z A;  2YF0 A;  2JP2 A;  3VOQ A;  2RRF A;  2D4Q A;  5LON B;  2DX5 A;  3PP2 A;  3TCA A;  4HB2 B;  4TKN A;  1XX0 A;  2I5F A;  3T06 A;  2DHK A;  1W1H A;  3U8Z A;  2Z4D A;  3RCP A;  5J3Q A;  3SO6 A;  3SUZ A;  2N0Y A;  5M4Y B;  3SNH A;  3TFM A;  2J0J A;  3PG7 A;  2RUK B;  4KHB A;  1V5U A;  3ULC A;  2YS1 A;  3O96 A;  2LYD A;  3NWF A;  4HDO A;  1XCG A;  2CY5 A;  4WSF A;  2CRF A;  3P6A A;  3BIN A;  1OMW A;  1Q67 A;  5FI1 A;  4TYZ A;  2BCJ A;  1ZSQ A;  4QJ4 B;  2DLW A;  2KIG A;  3ULB A;  3ZVR A;  3KRX A;  5KQ4 A;  4HDQ A;  3FSS A;  1K5D B;  3NSU A;  2MWN B;  3HK0 A;  1H4R A;  2DYQ A;  4YL8 A;  1X86 A;  3PVU A;  4HSI A;  4A6H A;  5L81 A;  1X05 A;  2I1J A;  1MK7 B;  4IFS A;  5JLJ B;  2P0H A;  4HAU B;  1OQN A;  3QBV B;  2EMS A;  3N7C A;  4GZU A;  4PNK A;  2EJ8 A;  2OQB A;  2HE7 A;  4K81 A;  1UNQ A;  2YVC A;  2ZPY A;  4A6F A;  2K49 A;  5CLL B;  4ZRK A;  2RSG A;  1U29 A;  2NBV A;  1AWE A;  1XOD A;  2IFS A;  2EMT A;  2J0K A;  1TQZ A;  2RGN B;  1Y19 B;  2P0F A;  2GJY A;  5I2S A;  4D6W A;  2VKI A;  1MPH A;  1M7E A;  2Y7B A;  4MK0 A;  4C0A A;  4EMO A;  1GC6 A;  5D3V A;  3ODX A;  2R09 A;  1ZYI A;  2YT1 A;  3GYP A;  4KVG B;  2Z14 A;  5D3Y A;  2LG1 A;  2K8E A;  2AL6 A;  2ELB A;  1DRO A;  1FOE A;  1UPQ A;  2V76 A;  4KHO A;  2J59 M;  4L1R A;  4D0N B;  2RNR B;  1J0W A;  4F7G A;  3AJ4 A;  3M1I B;  5DIF B;  2ROZ B;  4L6E A;  1EGX A;  3V5W A;  4HB0 B;  5KQ1 A;  2Y8F A;  2R0D A;  4GPT B;  2Z0Q A;  3ODW A;  3KSY A;  4WJ7 A;  2FJL A;  1QQG A;  4HHV A;  4HAV B;  2OTX A;  2YRY A;  4DBB A;  3FM8 C;  2CY4 A;  2XQN M;  2DTC A;  2EC1 A;  4GMX B;  3TO1 A;  1SHC A;  5C5B A;  5HE2 A;  1UNP A;  2YT2 A;  2M14 A;  5GOW B;  3CIK A;  5HE0 A;  1OY2 A;  2GCJ A;  3DCX A;  4Y94 A;  4KHA A;  2KUP A;  2Z59 A;  4HB4 B;  5JHH A;  2DKQ A;  2ROV A;  1B55 A;  1Z87 A;  3D8F A;  5DHF B;  1GG3 A;  3A58 A;  4OSN A;  2GUM A;  2MKR A;  3OAN A;  1X1G A;  1EAZ A;  2UZS A;  2DN6 A;  4KHB B;  2NZ8 B;  4QJ5 B;  2RLO A;  2YS5 A;  1BWN A;  3HIE A;  3NW8 A;  1FAO A;  4GN1 A;  1FHW A;  4GXB A;  2MFQ A;  2DA0 A;  1EF1 A;  3SYX A;  3F5R A;  2LKO A;  5DI9 B;  4F7U P;  1KZG A;  1SGH A;  1FHO A;  4B6H A;  2HTH B;  1PMS A;  1FHX A;  2RVB B;  2COF A;  1RJ2 A;  4CYE A;  1U5F A;  3ML4 A;  1DDM A;  5HE3 A;  3AU5 A;  2VRW B;  2DKP A;  2KIE A;  4Z2M B;  1I2H A;  1UPR A;  1WJM A;  3WYF B;  2D9X A;  1EVH A;  2Z0O A;  1BTN A;  2D9W A;  1V89 A;  1K5G B;  4CSQ A;  5CLQ B;  2N23 A;  2YT0 A;  1WJ1 A;  4HB3 B;  2GCL A;  3MPX A;  5LOP B;  2KR0 A;  4HAY B;  4HAZ B;  2D2Q A;  4GOU A;  2KCJ A;  1FGZ A;  3G9W A;  2VSZ A;  4HAT B;  3U12 A;  2D9V A;  2ADZ A;  4A6F B;  1XKE A;  1LW3 A;  1BAK A;  1GC7 A;  4DX9 0;  2NMB A;  4YON A;  1V61 A;  1FB8 A;  2ZKM X;  1MAI A;  1WGU A;  4GNK B;  2MDX A;  2DX1 A;  1P3R A;  1RRP B;  3LJU X;  3A98 B;  2I5C A;  2QKL A;  4QJ3 B;  1AQC A;  5D3W A;  4ZRJ A;  3ZDT A;  3HQC A;  3VIA A;  1FGY A;  1ZC3 B;  2E2X A;  2J0M A;  3KRW A;  3P7Z A;  1IRS A;  1ISN A;  3B77 A;  5D27 A;  1WGQ A;  2L2I A;  2KUQ A;  2H7D A;  1W1D A;  4DXA B;  2PZ1 A;  5JHG A;  3DXC A;  4DX8 A;  1Y5O A;  4ZRI A;  3ODO A;  2IYB A;  5DH9 B;  2D11 A;  1DBH A;  2YS3 A;  5C6R A;  5JP4 A;  1U27 A;  5FI0 A;  4DIX A;  4IAP A;  5I2M A;  4EJN A;  4Z2N A;  2W2W A;  1I7A A;  1W1G A;  1UEF A;  3CXB B;  4EKU A;  5C5B B;  2CAY A;  3F0W A;  2UZR A;  4K2O A;  1NI2 A;  1DYN A;  5IRS A;  1LB1 A;  3GYO A;  2LUL A;  4HAX B;  3PVW A;  4K2P A;  3FVC A;  1QC6 A;  2LOZ A;  4F7H A;  3A8P A;  1V5P A;  2DYN A;  4BBK A;  4H8S A;  2Q13 A;  1WI1 A;  3UZT A;  4XWX A;  4CHM A;  3QWM A;  1U2B A;  3HSA A;  1M7R A;  1U5D A;  2DHJ A;  1NU2 A;  3U7D A;  2DFK A;  5J3Y A;  1V88 A;  3D8D A;  4NY0 A;  3PVL A;  3PZD A;  3A8Q A;  5LG4 B;  3X23 A;  3KY9 A;  2ELA A;  2K2J A;  1KZ7 A;  4WVF B;  1H10 A;  5C16 A;  4QXA B;  1MKE A;  1U5G A;  3OHM B;  2KGX B;  5EFX A;  1PFJ A;  5KCV A;  3AU4 A;  5D3X A;  1MIX A;  1ZVR A;  3DXD A;  3NWD A;  1NTY A;  1XR0 B;  2DHI A;  1BTK A;  2P8V A;  2COA A;  4P7I A;  3KZ1 A;  2Y8G A;  4IOY X;  2W2X D;  1ZC4 B;  3TVV A;  1J19 A;  2D9Y A;  3D8E A;  1KI1 B;  2H7E A;  1X11 A;  2FJU B;  3WA0 A;  2X18 A;  2QKM A;  2LOX A;  2Z0P A;  1MIZ B;  1NTV A;  1X1F A;  4CHJ A;  4K17 A;  2P0D A;  1ZM0 A;  3PSC A;  3MDB C;  3FEH A;  3PEG A;  3SV1 A;  5DHA B;  2M38 A;  3TW1 A;  1N3H A;  4OT1 A;  2W2X C;  3NWA A;  2K00 A;  4GMV A;  1DDV A;  2COC A;  1UNR A;  2YSZ A;  1E5W A;  4A6K A;  1MI1 A; 
#chains in the Genus database with same CATH homology
 2FJU B;  4KHA A;  2Z59 A;  4IFS A;  2KUQ A;  2Z4D A;  2GCL A;  1ZYI A;  4GNK B;  5IRS A;  3GYP A;  3NWD A;  2Z14 A;  4PQ0 A;  4QJ4 B;  5M4Y B;  2KIG A;  3GYO A;  2Z13 A;  2KR0 A;  2K8E A;  3A58 A;  4OSN A;  2GUM A;  3FVC A;  4GOU A;  4KHB A;  4QJ3 B;  4IOY X;  3FSS A;  5LG4 B;  2K49 A;  3TW1 A;  2RRF A;  2NBV A;  3U12 A;  4KHB B;  4DIX A;  3TVV A;  2KIE A;  2R2Y A;  4KHO A;  4Z2M B;  5I2M A;  3NWF A;  4Z2N A;  4OT1 A;  4QJ5 B;  3TO1 A;  2ZKM X;  3NWA A;  4L1R A;  3HIE A;  2YT2 A;  3NW8 A;  5I2S A;  4QXA B;  4D6W A;  4HSI A;  3OHM B;  4CSQ A;  2GCJ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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