4KHBA

Structure of the spt16d pob3n heterodimer
Total Genus 21
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
21
sequence length
116
structure length
113
Chain Sequence
KRFESYKRDNQLPPKVRDMGIVIDQKNNTIVLPIMGRPVPFHINTIKNASKSDEGEWSFLRINFLSPGQRKDDQPFEDASAHFVRSLTFRSTDGDRYAEIANQISNLKREAVK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Uncharacterized protein SPT16D
publication title Structural basis of histone H2A-H2B recognition by the essential chaperone FACT.
pubmed doi rcsb
source organism Chaetomium thermophilum var. thermophilum
molecule tags Transcription/replication
total genus 21
structure length 113
sequence length 116
chains with identical sequence C, E, G
ec nomenclature
pdb deposition date 2013-04-30
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.29.210 Mainly Beta Roll PH-domain like PH-domain like 4khbA00
4KHBA
chains in the Genus database with same CATH superfamily
4GPTB 1QC6A 1W1GA 1Y5OA 2ZKMX 2CY5A 4HB2B 4CSQA 5M4YB 2M38A 2XQNM 4K81A 5DIFB 4A6FB 5D3VA 4QJ4B 1U5DA 5I2MA 2KIEA 1ZYIA 2PZ1A 4WVFB 3SO6A 3F0WA 2COCA 4Y94A 3HIEA 1FOEA 1T77A 2K2JA 2D9WA 3SUZA 1FHXA 1BWNA 3P6AA 4YONA 4KHOA 3AU4A 4HDQA 3TO1A 4L1RA 2P0DA 3PZDA 4HAVB 4DXAB 3PSCA 3RCPA 2I5FA 3NWAA 1Y19B 2DA0A 2KR0A 4OSNA 2YT2A 1AQCA 2D9XA 1V89A 1H10A 2VRWB 2Q13A 1XR0B 3PVWA 4MY6A 5C6RA 3U8ZA 2H7EA 2YF0A 2FJUB 5IRSA 1J0WA 2RVBB 2MKRA 2KGXB 1NTYA 2R09A 3D8FA 4K2PA 1PMSA 5D27A 1NI2A 4GOUA 4CHMA 4CYEA 4A6KA 4A6FA 2DFKA 3ODXA 3MDBC 1UPQA 4GN1A 4MT7A 3FEHA 2DKQA 1MIXA 2HE7A 1WGQA 4EMOA 2YT0A 3QBVB 1EVHA 2RSGA 4DIXA 1EAZA 5DI9B 2MFQA 3KRWA 1P3RA 5I2SA 4BBKA 4NY0A 1DROA 1TJ6A 1ZC3B 3FVCA 2AL6A 3SNHA 2K8EA 2K00A 2W2XD 1M7RA 5JLJB 3DXCA 3GYOA 2H7DA 1UNRA 3FM8C 4GZUA 2Z0PA 2RGNB 5J3QA 2LG1A 3D8EA 3VOQA 1UNPA 2DN6A 3TFMA 2P0HA 1LB1A 1RRPB 2ZPYA 1ZM0A 2R2YA 2RLOA 3ODOA 3QIJA 2D2QA 4HSIA 1XODA 3HW2B 2I1JA 2KCJA 2IYBA 1U27A 2V76A 2VKIA 4F7UP 2D9YA 1V5PA 1XKEA 1NTVA 1X1GA 2OQBA 1MAIA 2FJLA 1Q67A 3QWMA 2D11A 3GYPA 3BJIA 1MPHA 5KQ1A 1PLSA 2Z14A 2NZ8B 1OY2A 1OQNA 4YL8A 1V5MA 1PFJA 1ZSQA 3A8QA 1LW3A 1N3HA 2P0FA 3V5WA 5HE3A 1K5GB 2GUMA 3ULBA 2Z13A 4KVGB 2Z59A 5JP4A 4IFSA 4XWXA 2OTXA 4ZRIA 3UZTA 2DHKA 1SHCA 2LULA 1I7AA 2KUQA 5HE1A 1MI1A 4HHVA 2Y8GA 5CLLB 5D3YA 4TKNA 3CIKA 2VSZA 2N23A 1V5UA 3HQCA 4HB4B 3TVVA 3B77A 3CXBB 1X86A 3DCXA 2D10A 1OMWA 2L2IA 1RJ2A 4HAXB 1V61A 1XX0A 2DX5A 2G35A 4KHBA 4GXBA 4A5KA 5DH9B 1FGZA 4CHJA 5KQ4A 1IRSA 2LOZA 1W1HA 4IAPA 5GOWB 1AWEA 2MDXA 5D3XA 2KUPA 4H8SA 2D9ZA 1FAOA 4QXAB 1U5EA 5J3YA 1X05A 1EF1A 4TYZA 4NSWA 2DHJA 1GC7A 1KZGA 2D4QA 1XCGA 3ODWA 2KIGA 5EFXA 1M7EA 2YS1A 3PG7A 1FB8A 4Z2NA 2K2UA 3M1IB 5FI0A 2Z0OA 2BCJA 3PP2A 2I1KA 2D9VA 2CY4A 1DDWA 3T06A 3PVLA 4KAXB 4MK0A 3TCAA 4GNKB 3A8PA 2GS0A 4HDOA 4A6HA 4WJ7A 3ML4A 2YSZA 1U5GA 4IOYX 4F7HA 3WYFB 3OHMB 2GCLA 5LOPB 2ELBA 5HE2A 2ELAA 5D3WA 1TQZA 4ZRJA 2X18A 3PVUA 3ULCA 1XD4A 3A98B 3DXEA 2JP2A 3TW1A 4GMXB 1MKEA 1KZ7A 2YRYA 2MWNB 4KHBB 2COFA 2Z4DA 4HAWB 1U29A 1DBHA 5CLQB 1WI1A 4KHAA 5FI1A 2UZRA 4C0AA 2CODA 2Y7BA 2DKPA 5HE0A 3HK0A 3DXDA 3IVFA 1W1DA 4DX90 5C5BB 1GG3A 4HAUB 2E2XA 3NSUA 4GMVA 1MIZB 2M14A 5C16A 2LKOA 2R0DA 4HB0B 2GJYA 2UZSA 2AEHA 3KY9A 3NWDA 2IFSA 3VIAA 2CAYA 1QQGA 2I5CA 4K17A 2RRFA 5C79A 1E5WA 4PQ0A 2DYQA 1UPRA 3FSSA 2QKMA 3KSYA 1UNQA 3SV1A 3O96A 1X11A 2ROZB 2YT1A 4ZRKA 2NBVA 5DHFB 1TXDA 2YS5A 4EJNA 2W2WA 1ZC4B 4D6WA 1MK9B 1MK7B 2CRFA 5L81A 4P7IA 4DX8A 1Z87A 4OT1A 1U2BA 2RUKB 2DLWA 2GCJA 4HAYB 3X23A 1H4RA 3OANA 3NWFA 4PNKA 3KRXA 1WGUA 1ZVRA 2J59M 1WG7A 5C5BA 1I2HA 2LOXA 4QJ5B 2YVCA 3U7DA 1DDVA 1U5FA 1BTNA 3KZ1A 3BINA 2COAA 2L1CA 2YS3A 2K49A 1EGXA 1FHOA 5DHAB 2RNRB 3P7ZA 1X1FA 1DYNA 3U12A 3G9WA 4HAZB 2J0JA 1BTKA 4HB3B 1J19A 3SYXA 3WA0A 2DYNA 2P8VA 4K2OA 3HSAA 2HTHB 3AJ4A 3MPXA 2ROVA 1V88A 3N7CA 4L6EA 2J0KA 2NMBA 2DX1A 3A58A 1GC6A 2EMTA 1NU2A 5LONB 2ADZA 5J3TA 1FGYA 2Y8FA 2Z0QA 3AU5A 2LYDA 4Z2MB 4DBBA 1P6SA 4B6HA 1UEFA 2EJ8A 1ISNA 1B55A 4QJ3B 1P5TA 2DTCA 1K5DB 2DHIA 1WJMA 2EC1A 4D0NB 5KCVA 3ZDTA 5JHGA 2UVMA 3LJUX 1WJ1A 2J0MA 1BAKA 4EKUA 5JHHA 4HATB 1KI1B 5LG4B 2EMSA 4WSFA 3NW8A 3D8DA 3PEGA 1DDMA 3F5RA 1FHWA 3ZVRA 2N0YA 2W2XC 4F7GA 2QKLA 1WVHA 1SGHA
chains in the Genus database with same CATH topology
4Z2NA 2FJUB 4KHAA 4L1RA 4CSQA 2NBVA 2ZKMX 3NWDA 5M4YB 5IRSA 2K49A 4D6WA 5I2SA 2R2YA 3A58A 3NWAA 4OT1A 4QXAB 4HSIA 4QJ4B 5I2MA 3U12A 2KIEA 2KR0A 2GUMA 1ZYIA 2GCJA 2RRFA 3FVCA 4OSNA 3NW8A 3TO1A 2Z13A 2YT2A 4GOUA 4PQ0A 2Z59A 3NWFA 2K8EA 4GNKB 4IFSA 5LG4B 3TW1A 3HIEA 4Z2MB 3TVVA 3GYOA 3FSSA 4KHBB 2Z4DA 2KIGA 4IOYX 4QJ5B 3OHMB 4KHBA 2KUQA 4QJ3B 3GYPA 2GCLA 4KHOA 4DIXA 2Z14A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4KHB A; 
#chains in the Genus database with same CATH topology
 4GPT B;  1QC6 A;  1W1G A;  1Y5O A;  2ZKM X;  2CY5 A;  4HB2 B;  4CSQ A;  5M4Y B;  2M38 A;  2XQN M;  4K81 A;  5DIF B;  4A6F B;  5D3V A;  4QJ4 B;  1U5D A;  5I2M A;  2KIE A;  1ZYI A;  2PZ1 A;  4WVF B;  3SO6 A;  3F0W A;  2COC A;  4Y94 A;  3HIE A;  1FOE A;  1T77 A;  2K2J A;  2D9W A;  3SUZ A;  1FHX A;  1BWN A;  3P6A A;  4YON A;  4KHO A;  3AU4 A;  4HDQ A;  3TO1 A;  4L1R A;  2P0D A;  3PZD A;  4HAV B;  4DXA B;  3PSC A;  3RCP A;  2I5F A;  3NWA A;  1Y19 B;  2DA0 A;  2KR0 A;  4OSN A;  2YT2 A;  1AQC A;  2D9X A;  1V89 A;  1H10 A;  2VRW B;  2Q13 A;  1XR0 B;  3PVW A;  4MY6 A;  5C6R A;  3U8Z A;  2H7E A;  2YF0 A;  2FJU B;  5IRS A;  1J0W A;  2RVB B;  2MKR A;  2KGX B;  1NTY A;  2R09 A;  3D8F A;  4K2P A;  1PMS A;  5D27 A;  1NI2 A;  4GOU A;  4CHM A;  4CYE A;  4A6K A;  4A6F A;  2DFK A;  3ODX A;  3MDB C;  1UPQ A;  4GN1 A;  4MT7 A;  3FEH A;  2DKQ A;  1MIX A;  2HE7 A;  1WGQ A;  4EMO A;  2YT0 A;  3QBV B;  1EVH A;  2RSG A;  4DIX A;  1EAZ A;  5DI9 B;  2MFQ A;  3KRW A;  1P3R A;  5I2S A;  4BBK A;  4NY0 A;  1DRO A;  1TJ6 A;  1ZC3 B;  3FVC A;  2AL6 A;  3SNH A;  2K8E A;  2K00 A;  2W2X D;  1M7R A;  5JLJ B;  3DXC A;  3GYO A;  2H7D A;  1UNR A;  3FM8 C;  4GZU A;  2Z0P A;  2RGN B;  5J3Q A;  2LG1 A;  3D8E A;  3VOQ A;  1UNP A;  2DN6 A;  3TFM A;  2P0H A;  1LB1 A;  1RRP B;  2ZPY A;  1ZM0 A;  2R2Y A;  2RLO A;  3ODO A;  3QIJ A;  2D2Q A;  4HSI A;  1XOD A;  3HW2 B;  2I1J A;  2KCJ A;  2IYB A;  1U27 A;  2V76 A;  2VKI A;  4F7U P;  2D9Y A;  1V5P A;  1XKE A;  1NTV A;  1X1G A;  2OQB A;  1MAI A;  2FJL A;  1Q67 A;  3QWM A;  2D11 A;  3GYP A;  3BJI A;  1MPH A;  5KQ1 A;  1PLS A;  2Z14 A;  2NZ8 B;  1OY2 A;  1OQN A;  4YL8 A;  1V5M A;  1PFJ A;  1ZSQ A;  3A8Q A;  1LW3 A;  1N3H A;  2P0F A;  3V5W A;  5HE3 A;  1K5G B;  2GUM A;  3ULB A;  2Z13 A;  4KVG B;  2Z59 A;  5JP4 A;  4IFS A;  4XWX A;  2OTX A;  4ZRI A;  3UZT A;  2DHK A;  1SHC A;  2LUL A;  1I7A A;  2KUQ A;  5HE1 A;  1MI1 A;  4HHV A;  2Y8G A;  5CLL B;  5D3Y A;  4TKN A;  3CIK A;  2VSZ A;  2N23 A;  1V5U A;  3HQC A;  4HB4 B;  3TVV A;  3B77 A;  3CXB B;  1X86 A;  3DCX A;  2D10 A;  1OMW A;  2L2I A;  1RJ2 A;  4HAX B;  1V61 A;  1XX0 A;  2DX5 A;  2G35 A;  4KHB A;  4GXB A;  4A5K A;  5DH9 B;  1FGZ A;  4CHJ A;  5KQ4 A;  1IRS A;  2LOZ A;  1W1H A;  4IAP A;  5GOW B;  1AWE A;  2MDX A;  5D3X A;  2KUP A;  4H8S A;  2D9Z A;  1FAO A;  4QXA B;  1U5E A;  5J3Y A;  1X05 A;  1EF1 A;  4TYZ A;  4NSW A;  2DHJ A;  1GC7 A;  1KZG A;  2D4Q A;  1XCG A;  3ODW A;  2KIG A;  5EFX A;  1M7E A;  2YS1 A;  3PG7 A;  1FB8 A;  4Z2N A;  2K2U A;  3M1I B;  5FI0 A;  2Z0O A;  2BCJ A;  3PP2 A;  2I1K A;  2D9V A;  2CY4 A;  1DDW A;  3T06 A;  3PVL A;  4KAX B;  4MK0 A;  3TCA A;  4GNK B;  3A8P A;  2GS0 A;  4HDO A;  4A6H A;  4WJ7 A;  3ML4 A;  2YSZ A;  1U5G A;  4IOY X;  4F7H A;  3WYF B;  3OHM B;  2GCL A;  5LOP B;  2ELB A;  5HE2 A;  2ELA A;  5D3W A;  1TQZ A;  4ZRJ A;  2X18 A;  3PVU A;  3ULC A;  1XD4 A;  3A98 B;  3DXE A;  2JP2 A;  3TW1 A;  4GMX B;  1MKE A;  1KZ7 A;  2YRY A;  2MWN B;  4KHB B;  2COF A;  2Z4D A;  4HAW B;  1U29 A;  1DBH A;  5CLQ B;  1WI1 A;  4KHA A;  5FI1 A;  2UZR A;  4C0A A;  2COD A;  2Y7B A;  2DKP A;  5HE0 A;  3HK0 A;  3DXD A;  3IVF A;  1W1D A;  4DX9 0;  5C5B B;  1GG3 A;  4HAU B;  2E2X A;  3NSU A;  4GMV A;  1MIZ B;  2M14 A;  5C16 A;  2LKO A;  2R0D A;  4HB0 B;  2GJY A;  2UZS A;  2AEH A;  3KY9 A;  3NWD A;  2IFS A;  3VIA A;  2CAY A;  1QQG A;  2I5C A;  4K17 A;  2RRF A;  5C79 A;  1E5W A;  4PQ0 A;  2DYQ A;  1UPR A;  3FSS A;  2QKM A;  3KSY A;  1UNQ A;  3SV1 A;  3O96 A;  1X11 A;  2ROZ B;  2YT1 A;  4ZRK A;  2NBV A;  5DHF B;  1TXD A;  2YS5 A;  4EJN A;  2W2W A;  1ZC4 B;  4D6W A;  1MK9 B;  1MK7 B;  2CRF A;  5L81 A;  4P7I A;  4DX8 A;  1Z87 A;  4OT1 A;  1U2B A;  2RUK B;  2DLW A;  2GCJ A;  4HAY B;  3X23 A;  1H4R A;  3OAN A;  3NWF A;  4PNK A;  3KRX A;  1WGU A;  1ZVR A;  2J59 M;  1WG7 A;  5C5B A;  1I2H A;  2LOX A;  4QJ5 B;  2YVC A;  3U7D A;  1DDV A;  1U5F A;  1BTN A;  3KZ1 A;  3BIN A;  2COA A;  2L1C A;  2YS3 A;  2K49 A;  1EGX A;  1FHO A;  5DHA B;  2RNR B;  3P7Z A;  1X1F A;  1DYN A;  3U12 A;  3G9W A;  4HAZ B;  2J0J A;  1BTK A;  4HB3 B;  1J19 A;  3SYX A;  3WA0 A;  2DYN A;  2P8V A;  4K2O A;  3HSA A;  2HTH B;  3AJ4 A;  3MPX A;  2ROV A;  1V88 A;  3N7C A;  4L6E A;  2J0K A;  2NMB A;  2DX1 A;  3A58 A;  1GC6 A;  2EMT A;  1NU2 A;  5LON B;  2ADZ A;  5J3T A;  1FGY A;  2Y8F A;  2Z0Q A;  3AU5 A;  2LYD A;  4Z2M B;  4DBB A;  1P6S A;  4B6H A;  1UEF A;  2EJ8 A;  1ISN A;  1B55 A;  4QJ3 B;  1P5T A;  2DTC A;  1K5D B;  2DHI A;  1WJM A;  2EC1 A;  4D0N B;  5KCV A;  3ZDT A;  5JHG A;  2UVM A;  3LJU X;  1WJ1 A;  2J0M A;  1BAK A;  4EKU A;  5JHH A;  4HAT B;  1KI1 B;  5LG4 B;  2EMS A;  4WSF A;  3NW8 A;  3D8D A;  3PEG A;  1DDM A;  3F5R A;  1FHW A;  3ZVR A;  2N0Y A;  2W2X C;  4F7G A;  2QKL A;  1WVH A;  1SGH A; 
#chains in the Genus database with same CATH homology
 4Z2N A;  2FJU B;  4KHA A;  4L1R A;  4CSQ A;  2NBV A;  2ZKM X;  3NWD A;  5M4Y B;  5IRS A;  2K49 A;  4D6W A;  5I2S A;  2R2Y A;  3A58 A;  3NWA A;  4OT1 A;  4QXA B;  4HSI A;  4QJ4 B;  5I2M A;  3U12 A;  2KIE A;  2KR0 A;  2GUM A;  1ZYI A;  2GCJ A;  2RRF A;  3FVC A;  4OSN A;  3NW8 A;  3TO1 A;  2Z13 A;  2YT2 A;  4GOU A;  4PQ0 A;  2Z59 A;  3NWF A;  2K8E A;  4GNK B;  4IFS A;  5LG4 B;  3TW1 A;  3HIE A;  4Z2M B;  3TVV A;  3GYO A;  3FSS A;  4KHB B;  2Z4D A;  2KIG A;  4IOY X;  4QJ5 B;  3OHM B;  4KHB A;  2KUQ A;  4QJ3 B;  3GYP A;  2GCL A;  4KHO A;  4DIX A;  2Z14 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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