1PUOA

Crystal structure of fel d 1- the major cat allergen
Total Genus 64
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
64
sequence length
160
structure length
141
Chain Sequence
ETCPIFYDVFFAVANGNELLLDLSLTKVNATEPERTAMKKIQDCYVENGLISRVLDGLVMTTISSSKDCEICPAVKRDVDLFLTGTPDEYVEQVAQYKALPVVLENARILKNCVDAKMTEEDKENALSLLDKIYTSPLCLE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Allergen
source organism Felis catus
publication title The crystal structure of the major cat allergen Fel d 1, a member of the secretoglobin family.
pubmed doi rcsb
molecule keywords Major allergen I polypeptide, fused chain 2, chain 1
total genus 64
structure length 141
sequence length 160
chains with identical sequence B
ec nomenclature
pdb deposition date 2003-06-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF09252 Feld-I_B Allergen Fel d I-B chain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.920.50 Mainly Alpha Up-down Bundle Histone Acetyltransferase; Chain A Histone Acetyltransferase; Chain A 1puoA00
1PUOA 2EJNA 1ZKRA
chains in the Genus database with same CATH superfamily
4O70A 5DY7A 4HXSA 4LZSA 4YBMA 4UIZA 5HLSA 3O35A 5FH8A 5L8UA 2I8NA 3U5NA 4NUEA 2RI7A 5H85A 4KV4A 3O36A 5A5SA 5EI4A 4BHWA 5H1UA 3UW9A 5D3NA 5CQ5A 5IIDA 4QY4A 4O72A 4QBMA 5C87A 4QC1A 3SVGA 4QEVA 2RS9B 4YY4A 4HXRA 5CUAA 3SVHA 4CUTA 5D24A 5CQ4A 4QEUA 4TT4A 1N72A 4NRAA 4UIUA 4WHWA 4YY6A 5IGMA 3ERRA 3AADA 5A7CA 5I29A 4QZSA 5I86A 4A9LA 4TU6A 2G4AA 3TLPA 4NRBA 2KTBB 5EISA 4YBSA 5CUBA 4O7EA 5DKDA 4O78A 3G0LA 5C8GA 5A5NA 4C66A 4AKHA 4E96A 2YELA 3I3JA 3S91A 4HXPA 4MENA 3IU5A 5CP5A 5G4SA 2H60A 5A82A 4TU4A 5TCMA 4HXOA 4CUSA 5E9YA 5E9MA 4KCXA 5HRWA 5AMEA 3MXFA 4PTBA 4NUCA 4MEQA 3FKMX 2R0SA 5DKCA 5FE0A 5F2PA 4NRCA 5CS8A 3QZTA 5FE6A 4J1PA 2MJVB 5EWVA 4YYJA 4A9FA 3MULA 4HBWA 2I7KA 3U5JA 5HFRA 4Q0NA 4HXLA 5E3DA 4PKLA 1PUOA 5EU1A 5E9IA 5ENJA 4CFLA 4PCEA 4YATA 4NUDA 5FE5A 4MEPA 4O7AA 4O7BA 5EVAA 4YYGA 4MR6A 5D3PA 2YEMA 3QZSA 3S92A 1X0JA 2OSSA 4NR8A 5A81A 4AKGA 5DX4A 3HMFA 5KTUA 5CQ6A 4UYEA 4HXNA 4XY9A 3VKGA 2E3KA 2F6NA 1ZS5A 4C67A 4TTEA 4QYDA 4WIVA 5CY9A 4YYKA 5C89A 2R0YA 5E3GA 5DFDA 4J3IA 4CUUA 5KU3A 2EJNA 4IORA 2DKWA 4LZ2A 3P1CA 4NQMA 5FFVA 5F1LA 3MUKA 5IBNA 5EWCA 5I89A 4YYNA 4LYSA 5LVRA 2L5EA 4QSRA 5CQAA 5FFYA 4ALHA 1F68A 2RNWA 5AD2A 5CUDA 3P1DA 5E0RA 4CUPA 2GRCA 5C85A 2D9EA 4UYGA 5AMFA 5E74A 4LR6A 2OUOA 3Q2FA 2E7NA 3LQJA 5CUEA 5EV9A 5CQ3A 4A9EA 5KTXA 5FH7A 5CRMA 2N9GA 4N4IA 4YYIA 5A5OA 2FSAA 2NXBA 4UIXA 1E6IA 5IGNA 5EPRA 2F6JA 2R0VA 4Z93A 2RNYA 3ZYUA 5FE7A 5LUUA 4QSSA 4OGJA 4QB3A 4LYWA 4N4FA 5FB0A 4NR4A 4YK0A 1WUMA 5F1HA 4QSXA 3ONIA 4AKIA 5A85A 2WP1A 4ZW1A 3GG3A 4TZ2A 3U5PA 5D26A 2YYNA 4PCIA 4HBXA 4YH3A 2L85A 2WP2A 5I1QA 5JI8A 2YW5A 3UV2A 5HRVA 3HMEA 4UYFB 4PY6A 5D3SA 5DKHA 5EPBA 5FE3A 4QSWA 5FH6A 4BW1A 5CGPA 3UV5A 4Z6IA 4BW4A 3JVMA 5F62A 1EQFA 4TQNA 4HBYA 5IG6A 4QR4A 5FE2A 4AKNA 4BW3A 5D3RA 5EP7A 5EWDA 4XUAA 5CPEA 4N4GA 5F3AA 5D3LA 4XYAA 5DBMA 5A5RA 5DLXA 2RO1A 5J0DA 4A9MA 5FE8A 5DW1A 5LJ2A 5ENGA 5DYCA 3U5OA 5H1VA 5D7XA 5EWHA 5CQ8A 5I88A 3O33A 3UVWA 5COIA 4HXMA 4MR4A 5FB1A 4N3WA 5L8TA 4Z6HA 3DWYA 2DVQA 2RFJA 4HBVA 4AI6A 5FE4A 2D82A 4YYDA 3DAIA 4Q0OA 5DFCA 4QUUA 5DYUA 4FLPA 4TZ8A 4O7FA 5HJCA 5ENCA 4J0RA 4QSUA 3JVJA 5KO4A 5C7NA 4PS5A 5FG5A 3JVKA 2YDWA 4Y03A 5EQ1A 5CQTA 5EM3A 5FDZA 4ALGA 4NR6A 4UYDA 5LKTA 5E9VA 4TT6A 5D3HA 4CFKA 5DLZA 5FG6A 2R10A 3AQAA 4TS8A 4WHUA 3P1FA 5ENFA 2YQDA 5LKZA 5A83A 4LZRA 5FBXA 4XY8A 5CRZA 3D1BA 4O74A 4UITA 4O77A 4OGIA 5HQ6A 2DVRA 2RNXA 4LC2A 5F5ZA 5D25A 5IGLA 5DFBA 5LKUA 4GPJA 4A9JA 5L98A 4A9KA 4UYHA 4CURA 5DW2A 2L84A 3MB4A 4QSQA 5E9KA 5HQ5A 4NQNA 4NR7A 5F36A 4NR5A 3LQHA 4IR3A 3RCWA 4LYIA 5I80A 5DYAA 4ZQLA 5G4RA 5EPSA 4DONA 4O7CA 5ENIA 3UVYA 4CUQA 4QR5A 5CFWA 4QEWA 4MR3A 5EA1A 4F3IA 5IGKA 3IU6A 4QSVA 3UVXA 3D7CA 4KV1A 5CUCA 2DVSA 4A9IA 3U5KA 2E7OA 4Z1QA 4YYHA 5II2A 4NYXA 4UYFA 4TYLA 5HFQA 5KTWA 5EICA 4ZC9A 5AD3A 4A9OA 4A9NA 5ACYA 5F60A 5TB6A 2YEKA 5HQ7A 3LXJA 5F61A 3UVDA 4IR6A 4YYMA 5D3JA 5FE1A 3O34A 3LJWA 5I7XA 5FFWA 4NXJA 4YAXA 4NYVA 4J0SA 4OUFA 5F63A 3LQIA 5HRXA 3MB3A 5ETBA 4RVRA 4UIVA 3MQMA 4XUBA 5E73A 4MEOA 3U5MA 4A9HA 4QR3A 5A5QA 2OO1A 5DYXA 5BT5A 5JWMA 3P1EA 4UIWA 4O71A 4NS5A 5KHMA 4IR5A 3UV4A 5D3TA 5L96A 4BJXA 5D0CA 5BT4A 4O75A 4NR9A 5CTLA 4QNSA 1WUGA 5ENBA 3HMHA 3JVLA 4QYLA 5K29A 4YABA 5HM0A 2DWWA 5I83A 5LVQA 4CL9A 4IR4A 5ETDA 4Z1SA 4CLBA 5H1TA 5LKXA 2DATA 5ENEA 5FE9A 5HCLA 5L99A 5EK9A 4BW2A 5F25A 1JSPB 4LDFA 1ZKRA 5C4QA 5II1A 5HEMA 4NYWA 4UIYA 3G0JA 3SVFA 5A5PA 5ENHA 5HELA 4YADA 5FG4A 5CUGA 4QSTA 4QUTA 3U5LA 4HXKA 4YBTA 2LSPB 3NXBA 4MR5A 4LRGA 5CU8A 3D1DA 3QZVA 2DVVA 4TT2A 5CZGA 5CQ7A 4IOQA 3K2JA 4YH4A 5BT3A 5E9LA 1JM4B 3VKHA 4IOOA 4QSPA 4QC3A 5L97A 5LJ1A 4N4HA 5I7YA 5EGUA 4X2IA 5I40A 3P5OA 4YC9A 3O37A 5EWWA 5HENA 5LJ0A 5E7DA 3Q2EA 4O76A
chains in the Genus database with same CATH topology
4AI6A 3D1BA 3VKHA 1ZKRA 1PUOA 4AKHA 3VKGA 4AKGA 4AKIA 2EJNA 3D1DA 3ERRA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1PUO A;  2EJN A;  1ZKR A; 
#chains in the Genus database with same CATH topology
 4O70 A;  5DY7 A;  4HXS A;  4LZS A;  4YBM A;  4UIZ A;  5HLS A;  3O35 A;  5FH8 A;  5L8U A;  2I8N A;  3U5N A;  4NUE A;  2RI7 A;  5H85 A;  4KV4 A;  3O36 A;  5A5S A;  5EI4 A;  4BHW A;  5H1U A;  3UW9 A;  5D3N A;  5CQ5 A;  5IID A;  4QY4 A;  4O72 A;  4QBM A;  5C87 A;  4QC1 A;  3SVG A;  4QEV A;  2RS9 B;  4YY4 A;  4HXR A;  5CUA A;  3SVH A;  4CUT A;  5D24 A;  5CQ4 A;  4QEU A;  4TT4 A;  1N72 A;  4NRA A;  4UIU A;  4WHW A;  4YY6 A;  5IGM A;  3ERR A;  3AAD A;  5A7C A;  5I29 A;  4QZS A;  5I86 A;  4A9L A;  4TU6 A;  2G4A A;  3TLP A;  4NRB A;  2KTB B;  5EIS A;  4YBS A;  5CUB A;  4O7E A;  5DKD A;  4O78 A;  3G0L A;  5C8G A;  5A5N A;  4C66 A;  4AKH A;  4E96 A;  2YEL A;  3I3J A;  3S91 A;  4HXP A;  4MEN A;  3IU5 A;  5CP5 A;  5G4S A;  2H60 A;  5A82 A;  4TU4 A;  5TCM A;  4HXO A;  4CUS A;  5E9Y A;  5E9M A;  4KCX A;  5HRW A;  5AME A;  3MXF A;  4PTB A;  4NUC A;  4MEQ A;  3FKM X;  2R0S A;  5DKC A;  5FE0 A;  5F2P A;  4NRC A;  5CS8 A;  3QZT A;  5FE6 A;  4J1P A;  2MJV B;  5EWV A;  4YYJ A;  4A9F A;  3MUL A;  4HBW A;  2I7K A;  3U5J A;  5HFR A;  4Q0N A;  4HXL A;  5E3D A;  4PKL A;  1PUO A;  5EU1 A;  5E9I A;  5ENJ A;  4CFL A;  4PCE A;  4YAT A;  4NUD A;  5FE5 A;  4MEP A;  4O7A A;  4O7B A;  5EVA A;  4YYG A;  4MR6 A;  5D3P A;  2YEM A;  3QZS A;  3S92 A;  1X0J A;  2OSS A;  4NR8 A;  5A81 A;  4AKG A;  5DX4 A;  3HMF A;  5KTU A;  5CQ6 A;  4UYE A;  4HXN A;  4XY9 A;  3VKG A;  2E3K A;  2F6N A;  1ZS5 A;  4C67 A;  4TTE A;  4QYD A;  4WIV A;  5CY9 A;  4YYK A;  5C89 A;  2R0Y A;  5E3G A;  5DFD A;  4J3I A;  4CUU A;  5KU3 A;  2EJN A;  4IOR A;  2DKW A;  4LZ2 A;  3P1C A;  4NQM A;  5FFV A;  5F1L A;  3MUK A;  5IBN A;  5EWC A;  5I89 A;  4YYN A;  4LYS A;  5LVR A;  2L5E A;  4QSR A;  5CQA A;  5FFY A;  4ALH A;  1F68 A;  2RNW A;  5AD2 A;  5CUD A;  3P1D A;  5E0R A;  4CUP A;  2GRC A;  5C85 A;  2D9E A;  4UYG A;  5AMF A;  5E74 A;  4LR6 A;  2OUO A;  3Q2F A;  2E7N A;  3LQJ A;  5CUE A;  5EV9 A;  5CQ3 A;  4A9E A;  5KTX A;  5FH7 A;  5CRM A;  2N9G A;  4N4I A;  4YYI A;  5A5O A;  2FSA A;  2NXB A;  4UIX A;  1E6I A;  5IGN A;  5EPR A;  2F6J A;  2R0V A;  4Z93 A;  2RNY A;  3ZYU A;  5FE7 A;  5LUU A;  4QSS A;  4OGJ A;  4QB3 A;  4LYW A;  4N4F A;  5FB0 A;  4NR4 A;  4YK0 A;  1WUM A;  5F1H A;  4QSX A;  3ONI A;  4AKI A;  5A85 A;  2WP1 A;  4ZW1 A;  3GG3 A;  4TZ2 A;  3U5P A;  5D26 A;  2YYN A;  4PCI A;  4HBX A;  4YH3 A;  2L85 A;  2WP2 A;  5I1Q A;  5JI8 A;  2YW5 A;  3UV2 A;  5HRV A;  3HME A;  4UYF B;  4PY6 A;  5D3S A;  5DKH A;  5EPB A;  5FE3 A;  4QSW A;  5FH6 A;  4BW1 A;  5CGP A;  3UV5 A;  4Z6I A;  4BW4 A;  3JVM A;  5F62 A;  1EQF A;  4TQN A;  4HBY A;  5IG6 A;  4QR4 A;  5FE2 A;  4AKN A;  4BW3 A;  5D3R A;  5EP7 A;  5EWD A;  4XUA A;  5CPE A;  4N4G A;  5F3A A;  5D3L A;  4XYA A;  5DBM A;  5A5R A;  5DLX A;  2RO1 A;  5J0D A;  4A9M A;  5FE8 A;  5DW1 A;  5LJ2 A;  5ENG A;  5DYC A;  3U5O A;  5H1V A;  5D7X A;  5EWH A;  5CQ8 A;  5I88 A;  3O33 A;  3UVW A;  5COI A;  4HXM A;  4MR4 A;  5FB1 A;  4N3W A;  5L8T A;  4Z6H A;  3DWY A;  2DVQ A;  2RFJ A;  4HBV A;  4AI6 A;  5FE4 A;  2D82 A;  4YYD A;  3DAI A;  4Q0O A;  5DFC A;  4QUU A;  5DYU A;  4FLP A;  4TZ8 A;  4O7F A;  5HJC A;  5ENC A;  4J0R A;  4QSU A;  3JVJ A;  5KO4 A;  5C7N A;  4PS5 A;  5FG5 A;  3JVK A;  2YDW A;  4Y03 A;  5EQ1 A;  5CQT A;  5EM3 A;  5FDZ A;  4ALG A;  4NR6 A;  4UYD A;  5LKT A;  5E9V A;  4TT6 A;  5D3H A;  4CFK A;  5DLZ A;  5FG6 A;  2R10 A;  3AQA A;  4TS8 A;  4WHU A;  3P1F A;  5ENF A;  2YQD A;  5LKZ A;  5A83 A;  4LZR A;  5FBX A;  4XY8 A;  5CRZ A;  3D1B A;  4O74 A;  4UIT A;  4O77 A;  4OGI A;  5HQ6 A;  2DVR A;  2RNX A;  4LC2 A;  5F5Z A;  5D25 A;  5IGL A;  5DFB A;  5LKU A;  4GPJ A;  4A9J A;  5L98 A;  4A9K A;  4UYH A;  4CUR A;  5DW2 A;  2L84 A;  3MB4 A;  4QSQ A;  5E9K A;  5HQ5 A;  4NQN A;  4NR7 A;  5F36 A;  4NR5 A;  3LQH A;  4IR3 A;  3RCW A;  4LYI A;  5I80 A;  5DYA A;  4ZQL A;  5G4R A;  5EPS A;  4DON A;  4O7C A;  5ENI A;  3UVY A;  4CUQ A;  4QR5 A;  5CFW A;  4QEW A;  4MR3 A;  5EA1 A;  4F3I A;  5IGK A;  3IU6 A;  4QSV A;  3UVX A;  3D7C A;  4KV1 A;  5CUC A;  2DVS A;  4A9I A;  3U5K A;  2E7O A;  4Z1Q A;  4YYH A;  5II2 A;  4NYX A;  4UYF A;  4TYL A;  5HFQ A;  5KTW A;  5EIC A;  4ZC9 A;  5AD3 A;  4A9O A;  4A9N A;  5ACY A;  5F60 A;  5TB6 A;  2YEK A;  5HQ7 A;  3LXJ A;  5F61 A;  3UVD A;  4IR6 A;  4YYM A;  5D3J A;  5FE1 A;  3O34 A;  3LJW A;  5I7X A;  5FFW A;  4NXJ A;  4YAX A;  4NYV A;  4J0S A;  4OUF A;  5F63 A;  3LQI A;  5HRX A;  3MB3 A;  5ETB A;  4RVR A;  4UIV A;  3MQM A;  4XUB A;  5E73 A;  4MEO A;  3U5M A;  4A9H A;  4QR3 A;  5A5Q A;  2OO1 A;  5DYX A;  5BT5 A;  5JWM A;  3P1E A;  4UIW A;  4O71 A;  4NS5 A;  5KHM A;  4IR5 A;  3UV4 A;  5D3T A;  5L96 A;  4BJX A;  5D0C A;  5BT4 A;  4O75 A;  4NR9 A;  5CTL A;  4QNS A;  1WUG A;  5ENB A;  3HMH A;  3JVL A;  4QYL A;  5K29 A;  4YAB A;  5HM0 A;  2DWW A;  5I83 A;  5LVQ A;  4CL9 A;  4IR4 A;  5ETD A;  4Z1S A;  4CLB A;  5H1T A;  5LKX A;  2DAT A;  5ENE A;  5FE9 A;  5HCL A;  5L99 A;  5EK9 A;  4BW2 A;  5F25 A;  1JSP B;  4LDF A;  1ZKR A;  5C4Q A;  5II1 A;  5HEM A;  4NYW A;  4UIY A;  3G0J A;  3SVF A;  5A5P A;  5ENH A;  5HEL A;  4YAD A;  5FG4 A;  5CUG A;  4QST A;  4QUT A;  3U5L A;  4HXK A;  4YBT A;  2LSP B;  3NXB A;  4MR5 A;  4LRG A;  5CU8 A;  3D1D A;  3QZV A;  2DVV A;  4TT2 A;  5CZG A;  5CQ7 A;  4IOQ A;  3K2J A;  4YH4 A;  5BT3 A;  5E9L A;  1JM4 B;  3VKH A;  4IOO A;  4QSP A;  4QC3 A;  5L97 A;  5LJ1 A;  4N4H A;  5I7Y A;  5EGU A;  4X2I A;  5I40 A;  3P5O A;  4YC9 A;  3O37 A;  5EWW A;  5HEN A;  5LJ0 A;  5E7D A;  3Q2E A;  4O76 A; 
#chains in the Genus database with same CATH homology
 4AI6 A;  3D1B A;  3VKH A;  1ZKR A;  1PUO A;  4AKH A;  3VKG A;  4AKG A;  4AKI A;  2EJN A;  3D1D A;  3ERR A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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