The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
13
|
sequence length |
85
|
structure length |
85
|
Chain Sequence |
MGHHHHHHSHMGDGEGAGVLGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSENR
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| molecule tags |
Transcription
|
| source organism |
Homo sapiens
|
| publication title |
Solution NMR structure of C2H2-type Zinc-fingers 4 and 5 from human Insulinoma-associated protein 1 (fragment 424-497), Northeast Structural
Genomics Consortium Target HR7614B (CASP Target)
rcsb |
| molecule keywords |
Insulinoma-associated protein 1
|
| total genus |
13
|
| structure length |
85
|
| sequence length |
85
|
| ec nomenclature | |
| pdb deposition date | 2012-06-27 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF00096 | zf-C2H2 | Zinc finger, C2H2 type |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Alpha Beta | 2-Layer Sandwich | Double Stranded RNA Binding Domain | Classic Zinc Finger |
#chains in the Genus database with same CATH superfamily 1X5W A; 4F2J C; 2EN6 A; 2NAB A; 1NCS A; 3M99 B; 3VHT B; 2EL6 A; 2EE8 A; 4IJD A; 2CTD A; 1KJK A; 2LCE A; 2EMA A; 2EN1 A; 5KL4 A; 2EMG A; 2EPP A; 2EPU A; 1ZAA C; 5KL3 A; 2MKN A; 2EMW A; 2YSO A; 2EM6 A; 3EPH A; 1WJP A; 2JPA A; 2EMC A; 1UN6 B; 2EMB A; 2MDG A; 1TF3 A; 4IS1 C; 2EPR A; 3EPK A; 4GZN C; 1X6H A; 2YU8 A; 1YSA C; 1ZR9 A; 2EOO A; 2YRK A; 2ENH A; 2WBT A; 2LV2 A; 2HGH A; 4FK5 C; 2EM0 A; 2GHF A; 2EMI A; 2ENC A; 1JK2 A; 2YTD A; 4R2P A; 2WBS A; 2YTQ A; 2EMK A; 2EQ0 A; 2YTI A; 1RMD A; 2EOJ A; 2EN7 A; 2YTE A; 2EOE A; 3EPJ A; 2R1F A; 2YU5 A; 3UK3 C; 2PRT A; 1B69 A; 4R2E A; 5KL6 A; 2I13 A; 2EN8 A; 2DGC A; 1A1H A; 2YTG A; 2YRH A; 2EOR A; 2DLQ A; 2EN3 A; 4F6N A; 2EM7 A; 4WSG A; 4M9V C; 1YUJ A; 2DMI A; 3EPL A; 2EMZ A; 2EJ4 A; 2EPX A; 2EQ1 A; 2EM8 A; 2EP3 A; 2MKD A; 4X9J A; 3MHH C; 2EOY A; 2YSP A; 2E72 A; 2WCC 3; 1A1J A; 2BB8 A; 1Z1B A; 1X6E A; 2CSH A; 2D9H A; 1A1K A; 1G2F C; 1BB8 A; 1JK1 A; 1UBD C; 2JP9 A; 2YTJ A; 2DRP A; 5KL2 A; 2VRD A; 2RPC A; 4R2R A; 2EM9 A; 2EOM A; 1A1L A; 1ZU1 A; 1AAY A; 2YRM A; 4R2A A; 2EOH A; 2DLK A; 1F2I G; 2EOI A; 4F6M A; 2EM4 A; 2LT7 A; 1LLM C; 1P47 A; 2EOS A; 2YTN A; 4R2D A; 3MHS C; 1MEY C; 1TF6 A; 2EM2 A; 2A25 A; 1TN9 A; 2EMF A; 1X6F A; 2EPA A; 2ELY A; 2LVH A; 2EMY A; 1A1F A; 1G2D C; 2EL4 A; 2M9A A; 2YTP A; 2LO3 A; 2YTO A; 1A1G A; 2GLI A; 2YTF A; 1BBO A; 4R2S A; 1X3C A; 2EPZ A; 2EN4 A; 2EML A; 2EPC A; 2EOZ A; 2EN2 A; 1DGC A; 2ADR A; 2CT1 A; 2EQ3 A; 5KL7 A; 2WBU A; 2EOQ A; 4R2C A; 2EM3 A; 2EL5 A; 2ELZ A; 2ENA A; 5KL5 A; 2EM5 A; 2EMH A; 4R2Q A; 2J7J A; 1A1I A; 2EOF A; 2EMX A; 2EOX A; 1YUI A; 2RSI A; #chains in the Genus database with same CATH topology 1X5W A; 3MSW A; 3IWD A; 4F2J C; 2NAB A; 2K7I A; 1NCS A; 3M99 B; 3BF2 A; 2L92 A; 4JI6 E; 1KJK A; 3T1Y E; 5KL4 A; 4DR1 E; 2EMG A; 4YY3 E; 4LF7 E; 4R8O A; 5KL3 A; 1T4N A; 1X48 A; 3J7Y p; 3OTO E; 1N32 E; 2YPN A; 2MDG A; 2LUQ A; 3DF6 A; 2EPR A; 3EPK A; 3JU0 A; 1ZBT A; 2EZ6 A; 2ENH A; 4JI4 E; 1IBK E; 2L2N A; 4BMJ A; 4DR4 E; 4ZYG A; 4DR5 E; 2GHF A; 1WHN A; 2JY9 A; 2YTD A; 2EMK A; 2EQ0 A; 2EN7 A; 5A6K A; 3K6Q A; 2YU5 A; 1HNX E; 1EKZ A; 3UK3 C; 4DR2 E; 4Q28 A; 1I94 E; 4B3R E; 3FIG A; 2ODR D; 1WXR A; 2UUB E; 2NA2 A; 5AE3 A; 4LF5 E; 2DLQ A; 5IXM B; 1YUJ A; 4DUY E; 5A6B A; 3EPL A; 2ODR C; 3JTZ A; 2EPX A; 4WYQ B; 2YWQ A; 4X62 E; 2L2K B; 1A1J A; 4MLV A; 1DQ3 A; 2BB8 A; 2CSH A; 4LTY A; 1FKA E; 4B3M E; 1JK1 A; 4P7D A; 2DRP A; 4F9A B; 5KL2 A; 4AQY E; 2L33 A; 4R2R A; 2EM9 A; 4DMI A; 5IWA E; 2V8Q B; 2YRM A; 4ZYD A; 2RS7 A; 3IWC A; 3TQM A; 4BHB A; 4F54 A; 4WSP A; 1PDA A; 4R2D A; 2DIX A; 1EH7 A; 2M1S A; 4X8W A; 4NXM E; 2KHX A; 1G2D C; 2V85 A; 3C4T A; 2YTO A; 2JYA A; 4DV2 E; 1N3G A; 3J80 C; 1BBO A; 3J7A G; 2H36 X; 1SFE A; 2EML A; 2EPC A; 2EOZ A; 2WBU A; 4DV5 E; 2V83 A; 5A69 A; 1IBM E; 2EM3 A; 2ELZ A; 3HTX A; 4KWY A; 4LU9 A; 2F4V E; 2FV4 B; 1A1I A; 1FJG E; 1YYW A; 2EN6 A; 5BR8 E; 4BBY A; 4IJD A; 4LFA E; 2LCE A; 2EPP A; 2E5L E; 1EH6 A; 1MGT A; 2EMW A; 2HJJ A; 2YSO A; 1RQ0 A; 4JI1 E; 2EMC A; 1UN6 B; 2EMB A; 3C6K A; 1TF3 A; 4KZS A; 4IS1 C; 4M2Z A; 1EH8 A; 5A2Q C; 4GZN C; 1BBG A; 4JI8 E; 2L3J A; 1ZR9 A; 5AC5 A; 2LV2 A; 3EQ1 A; 3HXL A; 2EM0 A; 2EMI A; 1PJT A; 1HNZ E; 2V86 A; 2RSM A; 4BCA A; 4R2P A; 2WBS A; 4LF6 E; 2YTI A; 4JI5 E; 2YT4 A; 2MC5 A; 3THN A; 2EPN A; 2PRT A; 4BC7 A; 2DB2 A; 3BBG A; 1O0W A; 1RC7 A; 2LJH A; 1YYK A; 2JWO A; 2B7V A; 4TUI A; 1HNW E; 2EOR A; 4YHH E; 4L8N A; 4F6N A; 4K0K E; 2VE7 C; 2DMI A; 2UUC E; 4LFC E; 2EM8 A; 2EP3 A; 2MKD A; 2B3T B; 2NUF A; 2EOY A; 3KZY A; 2L3C A; 2V88 A; 2L6M A; 4BS9 A; 2WCC 3; 1XNQ E; 1YZ9 A; 1WRJ A; 5A6A A; 1X6E A; 2EPK X; 3C6M A; 3F6G A; 1BB8 A; 4WXD A; 1YYO A; 1UBD C; 3ADI A; 3ECR A; 5A6J A; 1ZU1 A; 5LL6 R; 4R2A A; 2MC6 A; 2R76 A; 2NUG A; 5AE2 A; 1TF6 A; 2YTN A; 2EM2 A; 3OML A; 1TN9 A; 4TUG A; 2EMF A; 2LVH A; 3HPZ A; 2CPN A; 1A1G A; 4WFT A; 2E1M A; 1GQE A; 2LO3 A; 1KYQ A; 1AH5 A; 3KZZ A; 3BGH A; 1X3C A; 2EPZ A; 4OX9 E; 2VQF E; 2NUE A; 3J81 C; 4O24 A; 4R2C A; 4DR3 E; 4DV4 E; 1IQO A; 5ADZ A; 2EMH A; 5LLQ A; 2J7J A; 4LF8 E; 1NEI A; 2EOF A; 2N8X A; 2EMX A; 2FGG A; 4DV3 E; 1YUI A; 4DV6 E; 1T4L B; 2EPL X; 3VHT B; 2EL6 A; 3THO B; 3QG5 C; 3HPS A; 3ZOQ B; 2DSY A; 2EE8 A; 1T39 A; 2EN1 A; 2EPU A; 3P1X A; 2MKN A; 5A6B D; 2EM6 A; 4GKK E; 3EPH A; 2JPA A; 3LLH A; 4I8O A; 2M4I A; 1GZ6 A; 1X6H A; 3IWB A; 2IHR 1; 2EOO A; 4OOG C; 2HGH A; 2LTS A; 5TSE A; 1N36 E; 1N33 E; 4BC9 A; 2ENC A; 4O43 A; 4O5G A; 1J5E E; 2VF1 A; 2YTQ A; 4DV1 E; 3AUZ A; 3C4B A; 1RMD A; 2EOJ A; 4J8Z A; 4ZYH A; 2R1F A; 3L00 A; 4HTG A; 2I9I A; 2LMZ A; 1B69 A; 4R2E A; 5KL6 A; 1A1H A; 2YRH A; 2EN3 A; 2EM7 A; 5IT9 C; 4M9V C; 4DUZ E; 2VQE E; 2EJ4 A; 2B7T A; 4GEQ B; 2EQ1 A; 1UHZ A; 4X9J A; 4LF9 E; 2L2M A; 1UIL A; 4F9C B; 2UUA E; 1Z1B A; 1G2F C; 3JAM C; 2ZM6 E; 2LUP B; 5F3W A; 2YTJ A; 2RPC A; 2N3H A; 1DI2 A; 2EOM A; 1PJS A; 4X64 E; 1L4S A; 5FLX C; 2DLK A; 3VYY A; 1F2I G; 3LML A; 2EOI A; 2EM4 A; 2LT7 A; 5AE1 A; 1LLM C; 1YPN A; 3MHS C; 2YZT A; 1IQS A; 2V87 A; 2FTX B; 1N34 E; 1A1F A; 4X65 E; 4JI3 E; 2EL4 A; 2M9A A; 2YTP A; 2GLI A; 3RMP A; 2F8B A; 2EN4 A; 4P78 A; 4RHB B; 4ZYE A; 1DGC A; 2JXP A; 2ADR A; 3BID A; 2CT1 A; 1HR0 E; 2BBG A; 2JR1 A; 2EOQ A; 2EL5 A; 2ENA A; 2G7H A; 1QNT A; 2EOX A; 3ADG A; 1PJQ A; 1IMU A; 2YRK A; 2RSI A; 3HQ1 A; 4BHC A; 2JOB A; 4WPY A; 4KHP E; 2CTD A; 1WHQ A; 2N3G A; 2EMA A; 1T38 A; 3F6H A; 2KOU A; 1ZAA C; 2GPI A; 2JVA A; 1IBL E; 1WJP A; 2B9D A; 2EWL A; 4JYA E; 2LJU A; 4RH8 A; 2LTR A; 1PKP A; 1T4O A; 2YU8 A; 1YSA C; 2UXC E; 5AC4 A; 1XNR E; 2EPO A; 3VK6 A; 2WBT A; 4X66 E; 5LMU E; 1GTK A; 4FK5 C; 3KWR A; 1JK2 A; 2UXD E; 1ZBQ A; 2V89 A; 5T6J A; 1J26 A; 4DR7 E; 2YTE A; 2EOE A; 3EPJ A; 3ADL A; 1YFH A; 4DR6 E; 5IV8 B; 5AAS A; 2I13 A; 2EN8 A; 2KON A; 4WXC A; 4HEI A; 2DGC A; 2YTG A; 4L5N C; 1XMQ E; 1XMO E; 2LBS B; 2RS6 A; 3ADJ A; 4WSG A; 4R03 A; 3AV0 A; 4N4R B; 4NZV A; 4F9B B; 2EMZ A; 2RTX A; 4JI0 E; 4Q35 B; 4LFB E; 3MHH C; 4JI7 E; 2YSP A; 2E72 A; 3T1H E; 2DMY A; 4M0V A; 3DJW A; 2D9H A; 2UXB E; 1A1K A; 2M7Q A; 4B3T E; 4M30 A; 5DNY A; 2JP9 A; 2JOX A; 2VRD A; 2LE2 A; 1A1L A; 1AAY A; 2WZO A; 5LMN E; 2EOH A; 2HC5 A; 4DV0 E; 4JV5 E; 2K4V A; 1X49 A; 4F6M A; 2MDR A; 1P47 A; 4GKJ E; 2EOS A; 1MEY C; 4NXN E; 2Q8U A; 2A25 A; 4MLQ A; 4NHR A; 1X6F A; 2EPA A; 2ELY A; 2EMY A; 3VYX A; 2L8T A; 4WX9 A; 1QU6 A; 4DKK A; 2YTF A; 5CFF E; 2UU9 E; 4JI2 E; 4R2S A; 2LRS A; 4DV7 E; 2EN2 A; 4B3S E; 2EQ3 A; 4O4K A; 5KL7 A; 4LF4 E; 1SR9 A; 1X47 A; 5KL5 A; 2EM5 A; 2RQL A; 1STU A; 2EPM X; 4R2Q A; 3H09 A; 2HHH E; #chains in the Genus database with same CATH homology 1X5W A; 4F2J C; 2EN6 A; 2NAB A; 1NCS A; 3M99 B; 3VHT B; 2EL6 A; 2EE8 A; 4IJD A; 2CTD A; 1KJK A; 2LCE A; 2EMA A; 2EN1 A; 5KL4 A; 2EMG A; 2EPP A; 2EPU A; 1ZAA C; 5KL3 A; 2MKN A; 2EMW A; 2YSO A; 2EM6 A; 3EPH A; 1WJP A; 2JPA A; 2EMC A; 1UN6 B; 2EMB A; 2MDG A; 1TF3 A; 4IS1 C; 2EPR A; 3EPK A; 4GZN C; 1X6H A; 2YU8 A; 1YSA C; 1ZR9 A; 2EOO A; 2YRK A; 2ENH A; 2WBT A; 2LV2 A; 2HGH A; 4FK5 C; 2EM0 A; 2GHF A; 2EMI A; 2ENC A; 1JK2 A; 2YTD A; 4R2P A; 2WBS A; 2YTQ A; 2EMK A; 2EQ0 A; 2YTI A; 1RMD A; 2EOJ A; 2EN7 A; 2YTE A; 2EOE A; 3EPJ A; 2R1F A; 2YU5 A; 3UK3 C; 2PRT A; 1B69 A; 4R2E A; 5KL6 A; 2I13 A; 2EN8 A; 2DGC A; 1A1H A; 2YTG A; 2YRH A; 2EOR A; 2DLQ A; 2EN3 A; 4F6N A; 2EM7 A; 4WSG A; 4M9V C; 1YUJ A; 2DMI A; 3EPL A; 2EMZ A; 2EJ4 A; 2EPX A; 2EQ1 A; 2EM8 A; 2EP3 A; 2MKD A; 4X9J A; 3MHH C; 2EOY A; 2YSP A; 2E72 A; 2WCC 3; 1A1J A; 2BB8 A; 1Z1B A; 1X6E A; 2CSH A; 2D9H A; 1A1K A; 1G2F C; 1BB8 A; 1JK1 A; 1UBD C; 2JP9 A; 2YTJ A; 2DRP A; 5KL2 A; 2VRD A; 2RPC A; 4R2R A; 2EM9 A; 2EOM A; 1A1L A; 1ZU1 A; 1AAY A; 2YRM A; 4R2A A; 2EOH A; 2DLK A; 1F2I G; 2EOI A; 4F6M A; 2EM4 A; 2LT7 A; 1LLM C; 1P47 A; 2EOS A; 2YTN A; 4R2D A; 3MHS C; 1MEY C; 1TF6 A; 2EM2 A; 2A25 A; 1TN9 A; 2EMF A; 1X6F A; 2EPA A; 2ELY A; 2LVH A; 2EMY A; 1A1F A; 1G2D C; 2EL4 A; 2M9A A; 2YTP A; 2LO3 A; 2YTO A; 1A1G A; 2GLI A; 2YTF A; 1BBO A; 4R2S A; 1X3C A; 2EPZ A; 2EN4 A; 2EML A; 2EPC A; 2EOZ A; 2EN2 A; 1DGC A; 2ADR A; 2CT1 A; 2EQ3 A; 5KL7 A; 2WBU A; 2EOQ A; 4R2C A; 2EM3 A; 2EL5 A; 2ELZ A; 2ENA A; 5KL5 A; 2EM5 A; 2EMH A; 4R2Q A; 2J7J A; 1A1I A; 2EOF A; 2EMX A; 2EOX A; 1YUI A; 2RSI A;
#similar chains in the Genus database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
