5TSEA

2.35 angstrom crystal structure minor lipoprotein from acinetobacter baumannii.
Total Genus 38
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
38
sequence length
136
structure length
136
Chain Sequence
ATPLVYKKLSLELPAKTDDLETQLKVYLTANGVQLSNDNDAYVLRVLEYTPRRQLLNGKLTEVLLRLTVTFQIEDRQGNKITEPRTLTAARSYQYDLATVNTENQQESYLQRIVIDDLAQQITRQISANRLPKAQP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lipid binding protein
molecule keywords LPS-assembly lipoprotein LptE
publication title 2.35 Angstrom Crystal Structure Minor Lipoprotein from Acinetobacter baumannii.
rcsb
source organism Acinetobacter baumannii
total genus 38
structure length 136
sequence length 136
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2016-10-28
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.160.150 Alpha Beta 2-Layer Sandwich Double Stranded RNA Binding Domain Lipoprotein like domain 5tseA00
5TSEA 5IV8B 4KWYA 5IXMB 2JXPA 3BF2A 2N8XA 4Q35B 4RH8A 2R76A 4NHRA 4RHBB 4N4RB
chains in the Genus database with same CATH superfamily
1EH7A 5LL6R 5LMUE 2L33A 2ENCA 2YTFA 3AV0A 1N32E 2YT4A 5ADZA 2UUAE 1XMOE 2EMXA 3JU0A 4Q28A 2H36X 4GKJE 5A6BA 4X66E 2EOIA 4B3TE 1IBME 1BBOA 4R2AA 1YYWA 2EOZA 2EE8A 4M2ZA 2EZ6A 1IQSA 1B69A 5AE1A 2VQFE 2LVHA 2EPLX 5KL7A 5A2QC 1WRJA 2LT7A 2G7HA 4KZSA 4LF9E 1YSAC 2V87A 2YTOA 2GLIA 1YPNA 1Z1BA 3KZZA 2VF1A 4IS1C 5AE2A 1XMQE 1A1GA 2ADRA 3IWDA 1SFEA 3L00A 3RMPA 5AC4A 1F2IG 4O4KA 4DV4E 1GZ6A 2LCEA 2JR1A 4DV1E 3EQ1A 2YRHA 3J7Yp 2DRPA 4JI5E 2EPCA 4DV7E 2MKDA 4WX9A 2EPAA 2EM6A 4P7DA 1IBKE 4JYAE 4TUGA 1UHZA 4B3RE 2EMFA 3HQ1A 1YFHA 1DGCA 1GQEA 2GHFA 4GEQB 3THNA 1JK1A 2LE2A 4R8OA 4BMJA 3ADLA 5TSEA 2DLQA 2B7VA 2EOSA 1TN9A 2FV4B 3M99B 1J5EE 2RS7A 2UXBE 5IT9C 2EM4A 2EM7A 2EPKX 4WPYA 5AASA 4LF7E 4R2RA 1T4NA 4R2EA 4DR1E 2I9IA 2MC5A 1X3CA 2MDGA 4O24A 4DV0E 1JK2A 1L4SA 1KYQA 4LF8E 2LMZA 1UN6B 4IJDA 2ENHA 2L92A 2EPMX 3IWBA 1PKPA 1X6FA 4R2DA 4K0KE 2B7TA 2EMCA 5A6BD 5A69A 4DV2E 2K4VA 3EPKA 4F54A 2DIXA 1XNRE 4NZVA 1A1HA 2EMBA 2EN4A 2LBSB 2V86A 3KZYA 4WSGA 5KL6A 3OMLA 2ZM6E 1GTKA 2EP3A 4F6MA 1SR9A 2B3TB 2WCC3 2EM0A 3ECRA 1AAYA 2YRKA 1RQ0A 2JY9A 2EPPA 4F9CB 1X5WA 1HNWE 3BIDA 2M4IA 2EOYA 4X8WA 2LUPB 2EMKA 2JOXA 2LUQA 2YTQA 2LTRA 2YTJA 4GZNC 2EPRA 1PJQA 2NABA 1RMDA 3DF6A 1A1JA 2UXCE 2D9HA 2RQLA 4RH8A 1LLMC 2WBTA 4WFTA 3MHHC 1A1LA 2Q8UA 1MEYC 2ELZA 5KL2A 1O0WA 4X9JA 2R1FA 2EMAA 2EORA 2M9AA 3AUZA 2DGCA 1X6EA 2KONA 1T38A 2IHR1 4MLVA 3EPJA 2HC5A 4AQYE 3UK3C 2NUEA 2YTPA 1QNTA 2EMZA 1A1FA 4BC7A 2EN1A 4DV6E 2K7IA 2UU9E 1YYKA 2BB8A 2NA2A 2L3CA 4JI1E 1QU6A 5A6KA 2LTSA 3DJWA 4DR2E 2LRSA 2F8BA 1PDAA 3THOB 2EN7A 4LFCE 2EN6A 1YYOA 2DMIA 1ZBQA 2HHHE 2HGHA 2EOMA 5DNYA 4ZYDA 4BBYA 4MLQA 4WXCA 1DQ3A 1ZU1A 1G2DC 2L3JA 3FIGA 3C4BA 2L2KB 1X6HA 5BR8E 2EOHA 2EJ4A 2J7JA 4HTGA 2DB2A 4FK5C 2N3GA 2LJUA 4ZYGA 4DUZE 2YPNA 2MKNA 3LLHA 2NUFA 2WBSA 2N8XA 2YTDA 1TF6A 4TUIA 1NEIA 1N36E 1BB8A 2L8TA 2UUBE 3HPSA 2EM2A 4NXME 2EN8A 3JAMC 4JI0E 2YTNA 4L5NC 3QG5C 5F3WA 4X62E 2A25A 4WSPA 4M30A 2YTGA 2L2MA 1WHNA 1N33E 3KWRA 4JI8E 2HJJA 2CTDA 2DSYA 5A6JA 2L2NA 3C6KA 4F9AB 4R2CA 2EQ1A 1MGTA 4J8ZA 3T1HE 2YU8A 4JI3E 2YRMA 1UBDC 1PJSA 2JXPA 4BHCA 2EQ3A 1X47A 2EN2A 4OX9E 3ZOQB 2LO3A 4O43A 1TF3A 4OOGC 2EPNA 3P1XA 4P78A 2EOXA 1X49A 4DR7E 2V89A 4LTYA 2RSMA 2EQ0A 1I94E 2DMYA 1NCSA 2EM3A 3MHSC 2FGGA 2M1SA 2CPNA 1HR0E 1XNQE 1EKZA 2RSIA 3F6GA 5KL4A 1G2FC 4JI6E 5FLXC 2VRDA 4LFBE 3BGHA 5CFFE 2EM5A 4HEIA 1ZAAC 1ZBTA 2ELYA 4ZYHA 4DV3E 4KHPE 5LMNE 3ADGA 3BF2A 2KHXA 4WXDA 2EL5A 4NHRA 3VYXA 3C6MA 3J81C 2EPOA 1KJKA 4DKKA 4YY3E 1BBGA 1J26A 4RHBB 4BC9A 2EN3A 2CT1A 4X65E 1YUIA 3J80C 3TQMA 2R76A 1STUA 1AH5A 4NXNE 2ODRD 2YZTA 1IQOA 4O5GA 4WYQB 2EMGA 2V8QB 1EH8A 1PJTA 2RTXA 4BS9A 4R2PA 1N34E 2UUCE 1N3GA 1YZ9A 2EOQA 2I13A 3H09A 4F2JC 4LF4E 2ODRC 2V83A 2PRTA 4JV5E 2F4VE 2UXDE 2ENAA 2JP9A 3OTOE 2JPAA 2E5LE 3HTXA 1UILA 1WJPA 2EMWA 2EMLA 1T4OA 4DV5E 4DUYE 2BBGA 2JWOA 4KWYA 5IXMB 2MDRA 5LLQA 1WXRA 5AE3A 2VQEE 4M9VC 2NUGA 3HXLA 4JI7E 3HPZA 3LMLA 2RPCA 2EOJA 2L6MA 5KL3A 2FTXB 4BHBA 3J7AG 2M7QA 4R2SA 2V88A 3VHTB 4F6NA 2YU5A 3JTZA 2JVAA 1RC7A 4I8OA 1HNXE 4F9BB 2DLKA 3T1YE 3ADJA 4B3SE 5KL5A 4R2QA 2E72A 4LF6E 2MC6A 4DR6E 2EM9A 4M0VA 1X48A 4LFAE 4DR3E 2EOEA 3VYYA 2LJHA 4DMIA 4Q35B 2JOBA 2YWQA 5AC5A 3F6HA 2EMIA 3VK6A 3K6QA 1P47A 2EL4A 2GPIA 2EOFA 2YTEA 1WHQA 4R03A 5A6AA 2EL6A 1YUJA 2B9DA 2YSOA 4LU9A 4X64E 4JI2E 1DI2A 1A1KA 2WBUA 3ADIA 2E1MA 3BBGA 2LV2A 2WZOA 3C4TA 2VE7C 1T39A 4GKKE 1A1IA 5T6JA 4JI4E 4BCAA 2KOUA 1IBLE 4YHHE 2CSHA 2EPZA 2EPUA 2YTIA 4LF5E 4B3ME 4ZYEA 4DR4E 4DR5E 3IWCA 1ZR9A 2RS6A 2EPXA 3EPHA 1EH6A 4L8NA 5IWAE 2JYAA 2EOOA 2YSPA 1HNZE 5IV8B 2EMYA 1FKAE 2V85A 1FJGE 2N3HA 1T4LB 2EWLA 2EMHA 3EPLA 1IMUA 4N4RB 3MSWA 2EM8A
chains in the Genus database with same CATH topology
5TSEA 5IV8B 4KWYA 5IXMB 2JXPA 3BF2A 2N8XA 4Q35B 4RH8A 2R76A 4NHRA 4RHBB 4N4RB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5TSE A;  5IV8 B;  4KWY A;  5IXM B;  2JXP A;  3BF2 A;  2N8X A;  4Q35 B;  4RH8 A;  2R76 A;  4NHR A;  4RHB B;  4N4R B; 
#chains in the Genus database with same CATH topology
 1EH7 A;  5LL6 R;  5LMU E;  2L33 A;  2ENC A;  2YTF A;  3AV0 A;  1N32 E;  2YT4 A;  5ADZ A;  2UUA E;  1XMO E;  2EMX A;  3JU0 A;  4Q28 A;  2H36 X;  4GKJ E;  5A6B A;  4X66 E;  2EOI A;  4B3T E;  1IBM E;  1BBO A;  4R2A A;  1YYW A;  2EOZ A;  2EE8 A;  4M2Z A;  2EZ6 A;  1IQS A;  1B69 A;  5AE1 A;  2VQF E;  2LVH A;  2EPL X;  5KL7 A;  5A2Q C;  1WRJ A;  2LT7 A;  2G7H A;  4KZS A;  4LF9 E;  1YSA C;  2V87 A;  2YTO A;  2GLI A;  1YPN A;  1Z1B A;  3KZZ A;  2VF1 A;  4IS1 C;  5AE2 A;  1XMQ E;  1A1G A;  2ADR A;  3IWD A;  1SFE A;  3L00 A;  3RMP A;  5AC4 A;  1F2I G;  4O4K A;  4DV4 E;  1GZ6 A;  2LCE A;  2JR1 A;  4DV1 E;  3EQ1 A;  2YRH A;  3J7Y p;  2DRP A;  4JI5 E;  2EPC A;  4DV7 E;  2MKD A;  4WX9 A;  2EPA A;  2EM6 A;  4P7D A;  1IBK E;  4JYA E;  4TUG A;  1UHZ A;  4B3R E;  2EMF A;  3HQ1 A;  1YFH A;  1DGC A;  1GQE A;  2GHF A;  4GEQ B;  3THN A;  1JK1 A;  2LE2 A;  4R8O A;  4BMJ A;  3ADL A;  5TSE A;  2DLQ A;  2B7V A;  2EOS A;  1TN9 A;  2FV4 B;  3M99 B;  1J5E E;  2RS7 A;  2UXB E;  5IT9 C;  2EM4 A;  2EM7 A;  2EPK X;  4WPY A;  5AAS A;  4LF7 E;  4R2R A;  1T4N A;  4R2E A;  4DR1 E;  2I9I A;  2MC5 A;  1X3C A;  2MDG A;  4O24 A;  4DV0 E;  1JK2 A;  1L4S A;  1KYQ A;  4LF8 E;  2LMZ A;  1UN6 B;  4IJD A;  2ENH A;  2L92 A;  2EPM X;  3IWB A;  1PKP A;  1X6F A;  4R2D A;  4K0K E;  2B7T A;  2EMC A;  5A6B D;  5A69 A;  4DV2 E;  2K4V A;  3EPK A;  4F54 A;  2DIX A;  1XNR E;  4NZV A;  1A1H A;  2EMB A;  2EN4 A;  2LBS B;  2V86 A;  3KZY A;  4WSG A;  5KL6 A;  3OML A;  2ZM6 E;  1GTK A;  2EP3 A;  4F6M A;  1SR9 A;  2B3T B;  2WCC 3;  2EM0 A;  3ECR A;  1AAY A;  2YRK A;  1RQ0 A;  2JY9 A;  2EPP A;  4F9C B;  1X5W A;  1HNW E;  3BID A;  2M4I A;  2EOY A;  4X8W A;  2LUP B;  2EMK A;  2JOX A;  2LUQ A;  2YTQ A;  2LTR A;  2YTJ A;  4GZN C;  2EPR A;  1PJQ A;  2NAB A;  1RMD A;  3DF6 A;  1A1J A;  2UXC E;  2D9H A;  2RQL A;  4RH8 A;  1LLM C;  2WBT A;  4WFT A;  3MHH C;  1A1L A;  2Q8U A;  1MEY C;  2ELZ A;  5KL2 A;  1O0W A;  4X9J A;  2R1F A;  2EMA A;  2EOR A;  2M9A A;  3AUZ A;  2DGC A;  1X6E A;  2KON A;  1T38 A;  2IHR 1;  4MLV A;  3EPJ A;  2HC5 A;  4AQY E;  3UK3 C;  2NUE A;  2YTP A;  1QNT A;  2EMZ A;  1A1F A;  4BC7 A;  2EN1 A;  4DV6 E;  2K7I A;  2UU9 E;  1YYK A;  2BB8 A;  2NA2 A;  2L3C A;  4JI1 E;  1QU6 A;  5A6K A;  2LTS A;  3DJW A;  4DR2 E;  2LRS A;  2F8B A;  1PDA A;  3THO B;  2EN7 A;  4LFC E;  2EN6 A;  1YYO A;  2DMI A;  1ZBQ A;  2HHH E;  2HGH A;  2EOM A;  5DNY A;  4ZYD A;  4BBY A;  4MLQ A;  4WXC A;  1DQ3 A;  1ZU1 A;  1G2D C;  2L3J A;  3FIG A;  3C4B A;  2L2K B;  1X6H A;  5BR8 E;  2EOH A;  2EJ4 A;  2J7J A;  4HTG A;  2DB2 A;  4FK5 C;  2N3G A;  2LJU A;  4ZYG A;  4DUZ E;  2YPN A;  2MKN A;  3LLH A;  2NUF A;  2WBS A;  2N8X A;  2YTD A;  1TF6 A;  4TUI A;  1NEI A;  1N36 E;  1BB8 A;  2L8T A;  2UUB E;  3HPS A;  2EM2 A;  4NXM E;  2EN8 A;  3JAM C;  4JI0 E;  2YTN A;  4L5N C;  3QG5 C;  5F3W A;  4X62 E;  2A25 A;  4WSP A;  4M30 A;  2YTG A;  2L2M A;  1WHN A;  1N33 E;  3KWR A;  4JI8 E;  2HJJ A;  2CTD A;  2DSY A;  5A6J A;  2L2N A;  3C6K A;  4F9A B;  4R2C A;  2EQ1 A;  1MGT A;  4J8Z A;  3T1H E;  2YU8 A;  4JI3 E;  2YRM A;  1UBD C;  1PJS A;  2JXP A;  4BHC A;  2EQ3 A;  1X47 A;  2EN2 A;  4OX9 E;  3ZOQ B;  2LO3 A;  4O43 A;  1TF3 A;  4OOG C;  2EPN A;  3P1X A;  4P78 A;  2EOX A;  1X49 A;  4DR7 E;  2V89 A;  4LTY A;  2RSM A;  2EQ0 A;  1I94 E;  2DMY A;  1NCS A;  2EM3 A;  3MHS C;  2FGG A;  2M1S A;  2CPN A;  1HR0 E;  1XNQ E;  1EKZ A;  2RSI A;  3F6G A;  5KL4 A;  1G2F C;  4JI6 E;  5FLX C;  2VRD A;  4LFB E;  3BGH A;  5CFF E;  2EM5 A;  4HEI A;  1ZAA C;  1ZBT A;  2ELY A;  4ZYH A;  4DV3 E;  4KHP E;  5LMN E;  3ADG A;  3BF2 A;  2KHX A;  4WXD A;  2EL5 A;  4NHR A;  3VYX A;  3C6M A;  3J81 C;  2EPO A;  1KJK A;  4DKK A;  4YY3 E;  1BBG A;  1J26 A;  4RHB B;  4BC9 A;  2EN3 A;  2CT1 A;  4X65 E;  1YUI A;  3J80 C;  3TQM A;  2R76 A;  1STU A;  1AH5 A;  4NXN E;  2ODR D;  2YZT A;  1IQO A;  4O5G A;  4WYQ B;  2EMG A;  2V8Q B;  1EH8 A;  1PJT A;  2RTX A;  4BS9 A;  4R2P A;  1N34 E;  2UUC E;  1N3G A;  1YZ9 A;  2EOQ A;  2I13 A;  3H09 A;  4F2J C;  4LF4 E;  2ODR C;  2V83 A;  2PRT A;  4JV5 E;  2F4V E;  2UXD E;  2ENA A;  2JP9 A;  3OTO E;  2JPA A;  2E5L E;  3HTX A;  1UIL A;  1WJP A;  2EMW A;  2EML A;  1T4O A;  4DV5 E;  4DUY E;  2BBG A;  2JWO A;  4KWY A;  5IXM B;  2MDR A;  5LLQ A;  1WXR A;  5AE3 A;  2VQE E;  4M9V C;  2NUG A;  3HXL A;  4JI7 E;  3HPZ A;  3LML A;  2RPC A;  2EOJ A;  2L6M A;  5KL3 A;  2FTX B;  4BHB A;  3J7A G;  2M7Q A;  4R2S A;  2V88 A;  3VHT B;  4F6N A;  2YU5 A;  3JTZ A;  2JVA A;  1RC7 A;  4I8O A;  1HNX E;  4F9B B;  2DLK A;  3T1Y E;  3ADJ A;  4B3S E;  5KL5 A;  4R2Q A;  2E72 A;  4LF6 E;  2MC6 A;  4DR6 E;  2EM9 A;  4M0V A;  1X48 A;  4LFA E;  4DR3 E;  2EOE A;  3VYY A;  2LJH A;  4DMI A;  4Q35 B;  2JOB A;  2YWQ A;  5AC5 A;  3F6H A;  2EMI A;  3VK6 A;  3K6Q A;  1P47 A;  2EL4 A;  2GPI A;  2EOF A;  2YTE A;  1WHQ A;  4R03 A;  5A6A A;  2EL6 A;  1YUJ A;  2B9D A;  2YSO A;  4LU9 A;  4X64 E;  4JI2 E;  1DI2 A;  1A1K A;  2WBU A;  3ADI A;  2E1M A;  3BBG A;  2LV2 A;  2WZO A;  3C4T A;  2VE7 C;  1T39 A;  4GKK E;  1A1I A;  5T6J A;  4JI4 E;  4BCA A;  2KOU A;  1IBL E;  4YHH E;  2CSH A;  2EPZ A;  2EPU A;  2YTI A;  4LF5 E;  4B3M E;  4ZYE A;  4DR4 E;  4DR5 E;  3IWC A;  1ZR9 A;  2RS6 A;  2EPX A;  3EPH A;  1EH6 A;  4L8N A;  5IWA E;  2JYA A;  2EOO A;  2YSP A;  1HNZ E;  5IV8 B;  2EMY A;  1FKA E;  2V85 A;  1FJG E;  2N3H A;  1T4L B;  2EWL A;  2EMH A;  3EPL A;  1IMU A;  4N4R B;  3MSW A;  2EM8 A; 
#chains in the Genus database with same CATH homology
 5TSE A;  5IV8 B;  4KWY A;  5IXM B;  2JXP A;  3BF2 A;  2N8X A;  4Q35 B;  4RH8 A;  2R76 A;  4NHR A;  4RHB B;  4N4R B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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