The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
24
|
sequence length |
83
|
structure length |
83
|
Chain Sequence |
MMVLVTYDVNTETPAGRKRLRHVAKLCVDYGQRVQNSVFECSVTPAEFVDIKHRLTQIIDEKTDSIRFYLLGKNWQRRVETLG
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| publication title |
Structural and functional characterization of Streptococcus pyogenes Cas2 protein under different pH conditions
pubmed doi rcsb |
| molecule tags |
Hydrolase
|
| source organism |
Streptococcus pyogenes serotype m1
|
| molecule keywords |
CRISPR-associated endoribonuclease Cas2
|
| total genus |
24
|
| structure length |
83
|
| sequence length |
83
|
| chains with identical sequence |
B
|
| ec nomenclature |
ec
3.1.-.-: |
| pdb deposition date | 2014-06-30 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF09827 | CRISPR_Cas2 | CRISPR associated protein Cas2 |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Alpha-Beta Plaits |
