The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
90
|
sequence length |
247
|
structure length |
240
|
Chain Sequence |
PRYLKGWLKDVVQLSLRRPSFRASRQRPIISLNERILEFNKRNITAIIAEYKRKSPSGLDVERDPIEYSKFMERYAVGLSILTEEKYFNGSYETLRKIASSVSIPILMADFIVKESQIDDAYNLGADTVLLIVKILTERELESLLEYARSYGMEPLIGINDENDLDIALRIGARFIGIHSHNKENQRKLISMIPSNVVKVAAHGISERNEIEELRKLGVNAFLIGSSLMRNPEKIKEFIL
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
publication title |
Probing the minimal determinants of zinc binding with computational protein design.
pubmed doi rcsb |
molecule tags |
Metal binding protein
|
source organism |
Sulfolobus solfataricus (strain atcc 35092 / dsm 1617 / jcm 11322 / p2)
|
molecule keywords |
Indole-3-glycerol phosphate synthase
|
total genus |
90
|
structure length |
240
|
sequence length |
247
|
chains with identical sequence |
B
|
ec nomenclature |
ec
4.1.1.48: Indole-3-glycerol-phosphate synthase. |
pdb deposition date | 2016-05-26 |
cath code
| Class | Architecture | Topology | Homology | Domain |
---|---|---|---|---|---|
Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I |