The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
35
|
sequence length |
155
|
structure length |
155
|
Chain Sequence |
HMLLTTSRKPSQRTRSFSQRLSRIMGWRYINRGKMSLRDVLIEARGPVAVVSERHGNPARITFLDERGGERGYILFNPSFEMKKPELADKAVRVSSCPPGSEGLCNLMGLEVDESSSRDAWSIRTDEEYAWVMELMDARGTPAGFKLLIRDFRVG
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| publication title |
Crystal Structure of Mil (Mth680): Internal Duplication and Similarity between the Imp4/Brix Domain and the Anticodon-Binding Domain of Class Iia Aminoacyl-tRNA Synthetases
pubmed doi rcsb |
| molecule tags |
Archaeal imp4-brix domain
|
| source organism |
Methanothermobacter thermautotrophicus
|
| molecule keywords |
PROBABLE BRIX-DOMAIN RIBOSOMAL BIOGENESIS PROTEIN
|
| total genus |
35
|
| structure length |
155
|
| sequence length |
155
|
| chains with identical sequence |
B
|
| ec nomenclature | |
| pdb deposition date | 2004-10-06 |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Probable brix-domain ribosomal biogenesis protein |
