The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
41
|
sequence length |
121
|
structure length |
121
|
Chain Sequence |
YGIVIVSHSPEIASGLKKLIREVAKNISLTAIGGLENGEIGTSFDRVMNAIEENEADNLLTFFDLGSARMNLDLVSEMTDKELTIFNVPLIEGAYTASALLEAGATFEAIKEQLEKMLIEK
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| molecule keywords |
PTS-dependent dihydroxyacetone kinase, ADP-binding subunit d
|
| publication title |
X-ray Structures of the Three Lactococcus lactis Dihydroxyacetone Kinase Subunits and of a Transient Intersubunit Complex.
pubmed doi rcsb |
| source organism |
Lactococcus lactis subsp. lactis
|
| molecule tags |
Transferase
|
| total genus |
41
|
| structure length |
121
|
| sequence length |
121
|
| chains with identical sequence |
D
|
| ec nomenclature |
ec
2.7.1.121: Phosphoenolpyruvate--glycerone phosphotransferase. |
| pdb deposition date | 2008-04-04 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| C | PF03610 | EIIA-man | PTS system fructose IIA component |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Phosphotransferase system, mannose-type IIA component |
