The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
104
|
sequence length |
272
|
structure length |
272
|
Chain Sequence |
IIPIPADSYTLGFIGAGKMAESIAKGAVRSGVLSPSRIKTAIHSNPARRTAFESIGITVLSSNDDVVRDSNVVVFSVKPQLLKDVVLKLKPLLTKDKLLVSVAAGIKMKDLQEWAGHERFIRVMPNTAATVGEAASVMSLGGAATEEDANLISQLFGSIGKIWKADDKYFDAITGLSGSGPAYIYLAIEALADGGVAAGLPRDLALSLASQTVLGAASMATQSGKHPGQLKDDVTSPGGTTIAGVHELEKAGFRGILMNAVVAAAKRSQELS
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
molecule keywords |
Pyrroline-5-carboxylate reductase
|
publication title |
The structure of Medicago truncatula delta (1)-pyrroline-5-carboxylate reductase provides new insights into regulation of proline biosynthesis in plants.
pubmed doi rcsb |
source organism |
Medicago truncatula
|
molecule tags |
Oxidoreductase
|
total genus |
104
|
structure length |
272
|
sequence length |
272
|
chains with identical sequence |
B, C, D, E, F, G, H, I, J
|
ec nomenclature |
ec
1.5.1.2: Pyrroline-5-carboxylate reductase. |
pdb deposition date | 2015-06-02 |
chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
---|---|---|---|
A | PF03807 | F420_oxidored | NADP oxidoreductase coenzyme F420-dependent |
A | PF14748 | P5CR_dimer | Pyrroline-5-carboxylate reductase dimerisation |
cath code
| Class | Architecture | Topology | Homology | Domain |
---|---|---|---|---|---|
Mainly Alpha | Orthogonal Bundle | ProC C-terminal domain-like fold | ProC C-terminal domain-like | ||
Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain |