The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
132
|
sequence length |
333
|
structure length |
333
|
Chain Sequence |
EKIYYDADISIQPLADKRIAVIGYGSQGHAHAQNLRDSGFDVVIGLRPGSSWAKAEADGFRVMAVGEAVEESDVIMILLPDERQPAVYEREIRPYLTAGKALAFAHGFNIHFSQIQPPKDVDVFMVAPKGPGHLVRRVYEAGGGVPALIAVHQDASGQAKDLALAYARGIGAGRAGILTTTFREETETDLFGEQAVLCGGLSALIKAGFETLVEAGYQPEIAYFECLHEMKLIVDLIYEGGLEYMRYSISDTAQWGDFTSGPRIINEETKKEMRRILADIQSGAFAKSWILENQANRPMFNAINRRELEHPIEVVGRKLRSMMPFIKAKRPGD
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| molecule keywords |
Ketol-acid reductoisomerase
|
| publication title |
Uncovering rare NADH-preferring ketol-acid reductoisomerases.
pubmed doi rcsb |
| source organism |
Alicyclobacillus acidocaldarius subsp. acidocaldarius
|
| molecule tags |
Oxidoreductase,isomerase
|
| total genus |
132
|
| structure length |
333
|
| sequence length |
333
|
| ec nomenclature |
ec
1.1.1.86: Ketol-acid reductoisomerase (NADP(+)). |
| pdb deposition date | 2014-06-18 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF01450 | IlvC | Acetohydroxy acid isomeroreductase, catalytic domain |
| A | PF07991 | IlvN | Acetohydroxy acid isomeroreductase, NADPH-binding domain |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Alpha | Orthogonal Bundle | ProC C-terminal domain-like fold | ProC C-terminal domain-like fold | ||
| Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain |
