The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
56
|
sequence length |
146
|
structure length |
146
|
Chain Sequence |
MSSTILVIHGPNLNLLGKREPEVYGHLTLDNINRQLIAQAEQASITLDTFQSNWEGAIVDRIHQAQTEGVKLIIINPAALTHTSVALRDALLGVAIPFIEVHLSNVHAREAFRHHSYLSDKAIGVICGLGAKGYSFALDYAIEKIQ
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| molecule keywords |
3-dehydroquinate dehydratase
|
| publication title |
Crystal Structure of type II Dehydroquinate dehydratase from Acinetobacter baumannii with different crystal form at 2.52 A Resolution
rcsb |
| source organism |
Acinetobacter baumannii (strain atcc 17978 / ncdc kc 755)
|
| molecule tags |
Lyase
|
| total genus |
56
|
| structure length |
146
|
| sequence length |
146
|
| chains with identical sequence |
B, C, D, E, F, G, H, I, J, K, L
|
| ec nomenclature |
ec
4.2.1.10: 3-dehydroquinate dehydratase. |
| pdb deposition date | 2015-04-15 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF01220 | DHquinase_II | Dehydroquinase class II |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Dehydroquinase, class II |
